RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 PTPN23Q9H3S7 1636 aa19.43■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 NRXN3Q9Y4C0 1643 aa19.43■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 NALCNQ8IZF0 1738 aa19.42■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 LAMC1P11047 1609 aa19.42■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 SF3B2Q13435 895 aaKnown RBP19.4■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 MYOM2P54296 1465 aa19.4■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 COL22A1Q8NFW1 1626 aaPredicted RBP19.4■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 GLI3P10071 1580 aa19.39■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 BRWD3Q6RI45 1802 aa19.38■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 RALGAPBQ86X10 1494 aa19.38■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 YY1P25490 414 aa19.35■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 UNC5CLQ8IV45 518 aa19.34■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 SEPT12Q8IYM1 358 aa19.34■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 VPS8Q8N3P4 1428 aa19.34■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 ANKRD50Q9ULJ7 1429 aa19.34■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 E9PCH4 1651 aa19.33■□□□□ 0.69
SMAD9-IT1-201ENST00000437983 MARF1Q9Y4F3 1742 aaKnown RBP19.33■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 XPCQ01831 940 aaPredicted RBP19.32■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 ADGRL2O95490 1459 aa19.3■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 R3HDM1Q15032 1099 aaKnown RBP19.3■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.3■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 MYCNP04198 464 aaPredicted RBP19.29■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 SLIT2O94813 1529 aa19.29■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 BAG6P46379 1132 aa19.27■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 KRT27Q7Z3Y8 459 aa19.27■□□□□ 0.68
SMAD9-IT1-201ENST00000437983 PXDNQ92626 1479 aa19.27■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 ROBO2Q9HCK4 1378 aa19.26■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 FOXO3O43524 673 aa19.25■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 ESCO1Q5FWF5 840 aa19.25■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 NPHP3Q7Z494 1330 aa19.25■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 ATXN8OSP0DMR3 200 aa19.24■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 IQGAP3Q86VI3 1631 aa19.22■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 VPS72Q15906 364 aa19.21■□□□□ 0.67
SMAD9-IT1-201ENST00000437983 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 FAM182BQ5T319 152 aa19.17■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 NEXMIFQ5QGS0 1516 aa19.15■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 A0A0G2JS52 829 aa19.15■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 MYT1Q01538 1121 aa19.15■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 USP32Q8NFA0 1604 aa19.14■□□□□ 0.66
SMAD9-IT1-201ENST00000437983 EZH2Q15910 746 aaKnown RBP19.14■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 IFFO2Q5TF58 517 aa19.14■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 CABLES1Q8TDN4 633 aa19.14■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 NUP155O75694 1391 aa19.13■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 FAM98CQ17RN3 349 aaKnown RBP19.12■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 HFM1A2PYH4 1435 aa19.1■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 LRPPRCP42704 1394 aaKnown RBP19.1■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 PLCH1Q4KWH8 1693 aa19.1■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 HAP1P54257 671 aaPredicted RBP19.09■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 CDC42BPGQ6DT37 1551 aa19.09■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 PRAG1Q86YV5 1406 aa19.08■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 RGPD1P0DJD0 1748 aa19.08■□□□□ 0.65
SMAD9-IT1-201ENST00000437983 KRT28Q7Z3Y7 464 aa19.07■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 CAMKK2Q96RR4 588 aa19.07■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 DISP2A7MBM2 1401 aa19.07■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 FAM83GA6ND36 823 aa19.06■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 TNS1Q9HBL0 1735 aaKnown RBP19.05■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 NWD2Q9ULI1 1742 aa19.05■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 SENP3-EIF4A1A0A087X0R7 540 aa19.05■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 APLP2Q06481 763 aa19.05■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 CLTCL1P53675 1640 aa19.04■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 NAIPQ13075 1403 aa19.04■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 WAPLQ7Z5K2 1190 aa19.03■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 ZNF784Q8NCA9 323 aaPredicted RBP19.02■□□□□ 0.64
SMAD9-IT1-201ENST00000437983 TRIM37O94972 964 aa19.01■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 VGFO15240 615 aaPredicted RBP19■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 PPP1R1BQ9UD71 204 aaPredicted RBP19■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 CAMTA1Q9Y6Y1 1673 aa19■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 BTG4Q9NY30 223 aa18.99■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 NRAPQ86VF7 1730 aa18.98■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 ABCA3Q99758 1704 aa18.97■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 APBA3O96018 575 aa18.97■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 STK26Q9P289 416 aa18.97■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 PLEKHH1Q9ULM0 1364 aa18.96■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 SPON1Q9HCB6 807 aa18.96■□□□□ 0.63
SMAD9-IT1-201ENST00000437983 ROCK1Q13464 1354 aa18.95■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 UTRNP46939 3433 aa18.95■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 SPATA31A5Q5VU36 1347 aa18.95■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 SPATA31A7Q8IWB4 1347 aa18.95■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 KIF1AQ12756 1690 aa18.95■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 NINLQ9Y2I6 1382 aa18.94■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 KCNQ2O43526 872 aa18.94■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 KIF1BO60333 1816 aa18.93■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 THSD7AQ9UPZ6 1657 aa18.93■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 C1QTNF8P60827 252 aa18.93■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 PSME1Q06323 249 aa18.93■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 FMN2Q9NZ56 1722 aa18.93■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms