RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
PTCH1-209ENST00000437951 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-209ENST00000437951 SLC4A3P48751 1232 aa13.8□□□□□ -0.2
PTCH1-209ENST00000437951 GBP2P32456 591 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-209ENST00000437951 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.8□□□□□ -0.2
PTCH1-209ENST00000437951 ENOX2Q16206 610 aaKnown RBP13.79□□□□□ -0.2
PTCH1-209ENST00000437951 MAGEC2Q9UBF1 373 aaPredicted RBP13.79□□□□□ -0.2
PTCH1-209ENST00000437951 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
PTCH1-209ENST00000437951 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
PTCH1-209ENST00000437951 PDCL3Q9H2J4 239 aa13.79□□□□□ -0.2
PTCH1-209ENST00000437951 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
PTCH1-209ENST00000437951 HSP90AB4PQ58FF6 505 aa13.79□□□□□ -0.2
PTCH1-209ENST00000437951 MAP9Q49MG5 647 aa13.79□□□□□ -0.2
PTCH1-209ENST00000437951 ERC2O15083 957 aa13.78□□□□□ -0.2
PTCH1-209ENST00000437951 CCDC146Q8IYE0 955 aa13.78□□□□□ -0.2
PTCH1-209ENST00000437951 VPS37CA5D8V6 355 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-209ENST00000437951 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
PTCH1-209ENST00000437951 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
PTCH1-209ENST00000437951 CTDP1Q9Y5B0 961 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-209ENST00000437951 ZNF396Q96N95 335 aaPredicted RBP13.77□□□□□ -0.2
PTCH1-209ENST00000437951 SDF4Q9BRK5 362 aa13.77□□□□□ -0.2
PTCH1-209ENST00000437951 SMC2O95347 1197 aa13.77□□□□□ -0.2
PTCH1-209ENST00000437951 FOXD4L6Q3SYB3 417 aaPredicted RBP13.77□□□□□ -0.2
PTCH1-209ENST00000437951 FOXD4L3Q6VB84 417 aaPredicted RBP13.77□□□□□ -0.2
PTCH1-209ENST00000437951 CLUAP1Q96AJ1 413 aa13.77□□□□□ -0.2
PTCH1-209ENST00000437951 CRBNQ96SW2 442 aa13.77□□□□□ -0.2
PTCH1-209ENST00000437951 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
PTCH1-209ENST00000437951 CCDC181Q5TID7 509 aa13.77□□□□□ -0.21
PTCH1-209ENST00000437951 RBM10P98175 930 aaKnown RBP13.76□□□□□ -0.21
PTCH1-209ENST00000437951 CCDC91Q7Z6B0 441 aa13.76□□□□□ -0.21
PTCH1-209ENST00000437951 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
PTCH1-209ENST00000437951 TXLNAP40222 546 aa13.76□□□□□ -0.21
PTCH1-209ENST00000437951 UBE2Q2Q8WVN8 375 aa13.75□□□□□ -0.21
PTCH1-209ENST00000437951 API5Q9BZZ5 524 aaKnown RBP13.75□□□□□ -0.21
PTCH1-209ENST00000437951 RAB3GAP2Q9H2M9 1393 aa13.75□□□□□ -0.21
PTCH1-209ENST00000437951 AEBP2Q6ZN18 517 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-209ENST00000437951 CDC45O75419 566 aa13.75□□□□□ -0.21
PTCH1-209ENST00000437951 NF2P35240 595 aa13.75□□□□□ -0.21
PTCH1-209ENST00000437951 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
PTCH1-209ENST00000437951 JMYQ8N9B5 988 aa13.75□□□□□ -0.21
PTCH1-209ENST00000437951 UACAQ9BZF9 1416 aa13.74□□□□□ -0.21
PTCH1-209ENST00000437951 GRPEL1Q9HAV7 217 aa13.74□□□□□ -0.21
PTCH1-209ENST00000437951 SYCP1Q15431 976 aa13.74□□□□□ -0.21
PTCH1-209ENST00000437951 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
PTCH1-209ENST00000437951 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
PTCH1-209ENST00000437951 LUZP1Q86V48 1076 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 PPM1EQ8WY54 764 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
PTCH1-209ENST00000437951 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 DNAJC2Q99543 621 aaKnown RBP13.73□□□□□ -0.21
PTCH1-209ENST00000437951 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 NFXL1Q6ZNB6 911 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 ESPNB1AK53 854 aa13.73□□□□□ -0.21
PTCH1-209ENST00000437951 HIP1O00291 1037 aa13.72□□□□□ -0.21
PTCH1-209ENST00000437951 FEZ1Q99689 392 aa13.72□□□□□ -0.21
PTCH1-209ENST00000437951 DZIP1LQ8IYY4 767 aaKnown RBP13.72□□□□□ -0.21
PTCH1-209ENST00000437951 POTEB2H3BUK9 544 aa13.71□□□□□ -0.21
PTCH1-209ENST00000437951 STIM1Q13586 685 aa13.71□□□□□ -0.21
PTCH1-209ENST00000437951 CENPHQ9H3R5 247 aa13.71□□□□□ -0.21
PTCH1-209ENST00000437951 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
PTCH1-209ENST00000437951 ZFYVE27Q5T4F4 411 aa13.71□□□□□ -0.21
PTCH1-209ENST00000437951 ZSCAN30Q86W11 494 aa13.71□□□□□ -0.21
PTCH1-209ENST00000437951 CCDC148Q8NFR7 591 aa13.71□□□□□ -0.22
PTCH1-209ENST00000437951 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
PTCH1-209ENST00000437951 STAMBPO95630 424 aa13.7□□□□□ -0.22
PTCH1-209ENST00000437951 BRPF3Q9ULD4 1205 aa13.7□□□□□ -0.22
PTCH1-209ENST00000437951 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
PTCH1-209ENST00000437951 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
PTCH1-209ENST00000437951 PKD2Q13563 968 aa13.7□□□□□ -0.22
PTCH1-209ENST00000437951 KIF3BO15066 747 aa13.69□□□□□ -0.22
PTCH1-209ENST00000437951 CCDC102AQ96A19 550 aa13.69□□□□□ -0.22
PTCH1-209ENST00000437951 CFAP57Q96MR6 1250 aa13.69□□□□□ -0.22
PTCH1-209ENST00000437951 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
PTCH1-209ENST00000437951 UBXN4Q92575 508 aa13.69□□□□□ -0.22
PTCH1-209ENST00000437951 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
PTCH1-209ENST00000437951 MAP2K1Q02750 393 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-209ENST00000437951 ANKRD1Q15327 319 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 FILIP1Q7Z7B0 1213 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 SERPINC1P01008 464 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 CTR9Q6PD62 1173 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 MSH5O43196 834 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 MCM5P33992 734 aa13.68□□□□□ -0.22
PTCH1-209ENST00000437951 WDR33Q9C0J8 1336 aaKnown RBP13.68□□□□□ -0.22
PTCH1-209ENST00000437951 RNF214Q8ND24 703 aa13.67□□□□□ -0.22
PTCH1-209ENST00000437951 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
PTCH1-209ENST00000437951 TIGD1Q96MW7 591 aa13.67□□□□□ -0.22
PTCH1-209ENST00000437951 ANKRD62A6NC57 917 aa13.67□□□□□ -0.22
PTCH1-209ENST00000437951 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
PTCH1-209ENST00000437951 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
PTCH1-209ENST00000437951 JAKMIP3Q5VZ66 844 aa13.67□□□□□ -0.22
PTCH1-209ENST00000437951 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
PTCH1-209ENST00000437951 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
PTCH1-209ENST00000437951 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
PTCH1-209ENST00000437951 KIAA1328Q86T90 577 aa13.66□□□□□ -0.22
PTCH1-209ENST00000437951 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-209ENST00000437951 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms