RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 CDC42BPGQ6DT37 1551 aa21.01■□□□□ 0.95
CPNE1-215ENST00000437100 EIF3AQ14152 1382 aaKnown RBP20.98■□□□□ 0.95
CPNE1-215ENST00000437100 POGKQ9P215 609 aa20.98■□□□□ 0.95
CPNE1-215ENST00000437100 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
CPNE1-215ENST00000437100 C14orf37Q86TY3 774 aa20.97■□□□□ 0.95
CPNE1-215ENST00000437100 CADPS2Q86UW7 1296 aa20.96■□□□□ 0.95
CPNE1-215ENST00000437100 SAFB2Q14151 953 aaKnown RBP eCLIP20.95■□□□□ 0.943e-13■□□□□ 9.1
CPNE1-215ENST00000437100 USP47Q96K76 1375 aa20.95■□□□□ 0.94
CPNE1-215ENST00000437100 SBNO2Q9Y2G9 1366 aa20.95■□□□□ 0.94
CPNE1-215ENST00000437100 MST1RQ04912 1400 aa20.95■□□□□ 0.94
CPNE1-215ENST00000437100 TOM1O60784 492 aa20.92■□□□□ 0.94
CPNE1-215ENST00000437100 ATF3P18847 181 aa20.92■□□□□ 0.94
CPNE1-215ENST00000437100 MINK1Q8N4C8 1332 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-215ENST00000437100 QRICH2Q9H0J4 1663 aa20.92■□□□□ 0.94
CPNE1-215ENST00000437100 UBAP1LF5GYI3 381 aa20.91■□□□□ 0.94
CPNE1-215ENST00000437100 TULP4Q9NRJ4 1543 aa20.89■□□□□ 0.94
CPNE1-215ENST00000437100 C1orf167Q5SNV9 1468 aa20.89■□□□□ 0.94
CPNE1-215ENST00000437100 TESK2Q96S53 571 aa20.89■□□□□ 0.93
CPNE1-215ENST00000437100 HIRIP3Q9BW71 556 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-215ENST00000437100 FMN2Q9NZ56 1722 aa20.89■□□□□ 0.93
CPNE1-215ENST00000437100 ST20-MTHFSA0A0A6YYL1 179 aa20.88■□□□□ 0.93
CPNE1-215ENST00000437100 WASLO00401 505 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-215ENST00000437100 SLAIN2Q9P270 581 aa20.88■□□□□ 0.93
CPNE1-215ENST00000437100 ANKARQ7Z5J8 1434 aa20.87■□□□□ 0.93
CPNE1-215ENST00000437100 FBXO41Q8TF61 875 aa20.86■□□□□ 0.93
CPNE1-215ENST00000437100 USP32Q8NFA0 1604 aa20.84■□□□□ 0.93
CPNE1-215ENST00000437100 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
CPNE1-215ENST00000437100 ATP7BP35670 1465 aa20.83■□□□□ 0.93
CPNE1-215ENST00000437100 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
CPNE1-215ENST00000437100 CDK19Q9BWU1 502 aa20.83■□□□□ 0.93
CPNE1-215ENST00000437100 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
CPNE1-215ENST00000437100 BRINP3Q76B58 766 aa20.82■□□□□ 0.92
CPNE1-215ENST00000437100 EVC2Q86UK5 1308 aa20.8■□□□□ 0.92
CPNE1-215ENST00000437100 ROBO1Q9Y6N7 1651 aa20.8■□□□□ 0.92
CPNE1-215ENST00000437100 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
CPNE1-215ENST00000437100 PIP4K2BP78356 416 aa20.8■□□□□ 0.92
CPNE1-215ENST00000437100 NUTM2FA1L443 756 aa20.78■□□□□ 0.92
CPNE1-215ENST00000437100 SLC24A1O60721 1099 aa20.78■□□□□ 0.92
CPNE1-215ENST00000437100 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
CPNE1-215ENST00000437100 TOPAZ1Q8N9V7 1692 aa20.77■□□□□ 0.92
CPNE1-215ENST00000437100 DISP3Q9P2K9 1392 aa20.77■□□□□ 0.92
CPNE1-215ENST00000437100 NUDT16Q96DE0 195 aaKnown RBP20.77■□□□□ 0.92
CPNE1-215ENST00000437100 PUS7Q96PZ0 661 aaKnown RBP20.77■□□□□ 0.92
CPNE1-215ENST00000437100 CABP2Q9NPB3 220 aa20.77■□□□□ 0.92
CPNE1-215ENST00000437100 AHDC1Q5TGY3 1603 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-215ENST00000437100 SRPK2P78362 688 aaKnown RBP20.75■□□□□ 0.91
CPNE1-215ENST00000437100 KIF1AQ12756 1690 aa20.74■□□□□ 0.91
CPNE1-215ENST00000437100 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
CPNE1-215ENST00000437100 CCDC61Q9Y6R9 512 aa20.74■□□□□ 0.91
CPNE1-215ENST00000437100 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
CPNE1-215ENST00000437100 TMF1P82094 1093 aa20.73■□□□□ 0.91
CPNE1-215ENST00000437100 NHSL1Q5SYE7 1610 aa20.73■□□□□ 0.91
CPNE1-215ENST00000437100 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
CPNE1-215ENST00000437100 PHF8Q9UPP1 1060 aa20.72■□□□□ 0.91
CPNE1-215ENST00000437100 RGPD8O14715 1765 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-215ENST00000437100 ITSN1Q15811 1721 aa20.71■□□□□ 0.91
CPNE1-215ENST00000437100 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
CPNE1-215ENST00000437100 POLR3AO14802 1390 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-215ENST00000437100 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
CPNE1-215ENST00000437100 PXDNQ92626 1479 aa20.69■□□□□ 0.9
CPNE1-215ENST00000437100 COL16A1Q07092 1604 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-215ENST00000437100 DDX17Q92841 729 aaKnown RBP20.68■□□□□ 0.9
CPNE1-215ENST00000437100 SOS2Q07890 1332 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-215ENST00000437100 NPHP3Q7Z494 1330 aa20.68■□□□□ 0.9
CPNE1-215ENST00000437100 HSPA1LP34931 641 aa20.67■□□□□ 0.9
CPNE1-215ENST00000437100 PMFBP1Q8TBY8 1022 aa20.67■□□□□ 0.9
CPNE1-215ENST00000437100 FOXO3O43524 673 aa20.66■□□□□ 0.9
CPNE1-215ENST00000437100 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
CPNE1-215ENST00000437100 ILDR1Q86SU0 546 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-215ENST00000437100 NINLQ9Y2I6 1382 aa20.66■□□□□ 0.9
CPNE1-215ENST00000437100 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-215ENST00000437100 CABP1Q9NZU7 370 aa20.65■□□□□ 0.9
CPNE1-215ENST00000437100 CD163L1Q9NR16 1453 aa20.64■□□□□ 0.89
CPNE1-215ENST00000437100 CPSF1Q10570 1443 aaKnown RBP20.64■□□□□ 0.89
CPNE1-215ENST00000437100 PHLPP1O60346 1717 aa20.64■□□□□ 0.89
CPNE1-215ENST00000437100 ACEP12821 1306 aa20.63■□□□□ 0.89
CPNE1-215ENST00000437100 SBNO1A3KN83 1393 aa20.61■□□□□ 0.89
CPNE1-215ENST00000437100 NGDNQ8NEJ9 315 aaKnown RBP20.61■□□□□ 0.89
CPNE1-215ENST00000437100 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
CPNE1-215ENST00000437100 SLC12A5Q9H2X9 1139 aa20.6■□□□□ 0.89
CPNE1-215ENST00000437100 USP6P35125 1406 aa20.6■□□□□ 0.89
CPNE1-215ENST00000437100 TRPM3Q9HCF6 1732 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-215ENST00000437100 MYOM1P52179 1685 aa20.59■□□□□ 0.89
CPNE1-215ENST00000437100 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-215ENST00000437100 KRT28Q7Z3Y7 464 aa20.59■□□□□ 0.89
CPNE1-215ENST00000437100 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-215ENST00000437100 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
CPNE1-215ENST00000437100 PSME1Q06323 249 aa20.58■□□□□ 0.89
CPNE1-215ENST00000437100 SPATA31A3Q5VYP0 1347 aa20.57■□□□□ 0.88
CPNE1-215ENST00000437100 TNS3Q68CZ2 1445 aa20.57■□□□□ 0.88
CPNE1-215ENST00000437100 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
CPNE1-215ENST00000437100 AKAP12Q02952 1782 aa20.57■□□□□ 0.88
CPNE1-215ENST00000437100 TMC1Q8TDI8 760 aa20.56■□□□□ 0.88
CPNE1-215ENST00000437100 LRRC59Q96AG4 307 aaKnown RBP20.56■□□□□ 0.88
CPNE1-215ENST00000437100 ZNF692Q9BU19 519 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-215ENST00000437100 ANKRD36BQ8N2N9 1353 aa20.56■□□□□ 0.88
CPNE1-215ENST00000437100 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
CPNE1-215ENST00000437100 JCADQ9P266 1359 aa20.56■□□□□ 0.88
CPNE1-215ENST00000437100 WASHC2AQ641Q2 1341 aa20.55■□□□□ 0.88
CPNE1-215ENST00000437100 NRKQ7Z2Y5 1582 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms