RNA–Protein interactions for RNA: ENST00000436542.6

LRRC49-202, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 2,294 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-202ENST00000436542 BRD2P25440 801 aaKnown RBP3.26□□□□□ -1.89
LRRC49-202ENST00000436542 CLK2P49760 499 aaKnown RBP3.26□□□□□ -1.89
LRRC49-202ENST00000436542 SRPK2P78362 688 aaKnown RBP3.26□□□□□ -1.89
LRRC49-202ENST00000436542 NFX1Q12986 1120 aaKnown RBP3.26□□□□□ -1.89
LRRC49-202ENST00000436542 TMEM259Q4ZIN3 620 aa3.26□□□□□ -1.89
LRRC49-202ENST00000436542 MYSM1Q5VVJ2 828 aa3.26□□□□□ -1.89
LRRC49-202ENST00000436542 SMARCA5O60264 1052 aaPredicted RBP3.25□□□□□ -1.89
LRRC49-202ENST00000436542 MDM2Q00987 491 aaPredicted RBP3.25□□□□□ -1.89
LRRC49-202ENST00000436542 DPY19L2Q6NUT2 758 aa3.25□□□□□ -1.89
LRRC49-202ENST00000436542 SPATA32Q96LK8 384 aa3.25□□□□□ -1.89
LRRC49-202ENST00000436542 DRC1Q96MC2 740 aa3.25□□□□□ -1.89
LRRC49-202ENST00000436542 CWC22Q9HCG8 908 aaKnown RBP3.25□□□□□ -1.89
LRRC49-202ENST00000436542 PRM3Q9NNZ6 103 aa3.25□□□□□ -1.89
LRRC49-202ENST00000436542 DGAT1O75907 488 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 PTGDRQ13258 359 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 DSG2Q14126 1118 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 TXNDC2Q86VQ3 553 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 KHSRPQ92945 711 aaKnown RBP eCLIP3.24□□□□□ -1.89
LRRC49-202ENST00000436542 WNT2BQ93097 391 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 KCNH8Q96L42 1107 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 TBC1D2BQ9UPU7 963 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 GNEQ9Y223 722 aaKnown RBP3.24□□□□□ -1.89
LRRC49-202ENST00000436542 TCF3P15923 654 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 HDGFL1Q5TGJ6 251 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 FBXO31Q5XUX0 539 aaPredicted RBP3.24□□□□□ -1.89
LRRC49-202ENST00000436542 ZSCAN1Q8NBB4 408 aa3.24□□□□□ -1.89
LRRC49-202ENST00000436542 SREK1Q8WXA9 508 aaKnown RBP3.24□□□□□ -1.89
LRRC49-202ENST00000436542 TMEM88BA6NKF7 163 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 ERCC3P19447 782 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 ADAMTS19Q8TE59 1207 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 LHX6Q9UPM6 363 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 SOCS7O14512 581 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 DMRTA1Q5VZB9 504 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 PPP2R2DQ66LE6 453 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 C8orf37Q96NL8 207 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 PPP1R12CQ9BZL4 782 aa3.23□□□□□ -1.89
LRRC49-202ENST00000436542 FAM217BQ9NTX9 383 aaPredicted RBP3.23□□□□□ -1.89
LRRC49-202ENST00000436542 NCLP19338 710 aaKnown RBP3.22□□□□□ -1.89
LRRC49-202ENST00000436542 MAP3K9P80192 1104 aa3.22□□□□□ -1.89
LRRC49-202ENST00000436542 TSR1Q2NL82 804 aaKnown RBP3.22□□□□□ -1.89
LRRC49-202ENST00000436542 B4GALNT3Q6L9W6 998 aa3.22□□□□□ -1.89
LRRC49-202ENST00000436542 DNAJC14Q6Y2X3 702 aaPredicted RBP3.22□□□□□ -1.89
LRRC49-202ENST00000436542 PHOX2BQ99453 314 aa3.22□□□□□ -1.89
LRRC49-202ENST00000436542 ZNF16P17020 682 aaPredicted RBP3.22□□□□□ -1.89
LRRC49-202ENST00000436542 ANKRD13AQ8IZ07 590 aa3.22□□□□□ -1.89
LRRC49-202ENST00000436542 CCER1Q8TC90 406 aaPredicted RBP3.22□□□□□ -1.89
LRRC49-202ENST00000436542 DDX12PQ92771 950 aa3.22□□□□□ -1.89
LRRC49-202ENST00000436542 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
LRRC49-202ENST00000436542 ATG7O95352 703 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 NUDT7P0C024 238 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 LMOD1P29536 600 aaPredicted RBP3.21□□□□□ -1.9
LRRC49-202ENST00000436542 PRIM1P49642 420 aaKnown RBP3.21□□□□□ -1.9
LRRC49-202ENST00000436542 FOXK1P85037 733 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 NYAP1Q6ZVC0 841 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 SIRT1Q96EB6 747 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 BCL2L13Q9BXK5 485 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 TBC1D2Q9BYX2 928 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 ARID4BQ4LE39 1312 aaPredicted RBP3.21□□□□□ -1.9
LRRC49-202ENST00000436542 PALM3A6NDB9 673 aaPredicted RBP3.21□□□□□ -1.9
LRRC49-202ENST00000436542 KCNMA1Q12791 1236 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 DIXDC1Q155Q3 683 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 FAM9AQ8IZU1 332 aaPredicted RBP3.21□□□□□ -1.9
LRRC49-202ENST00000436542 UBXN4Q92575 508 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 LIMD1Q9UGP4 676 aa3.21□□□□□ -1.9
LRRC49-202ENST00000436542 CADPSQ9ULU8 1353 aa3.2□□□□□ -1.9
LRRC49-202ENST00000436542 IGHA1P01876 353 aa3.2□□□□□ -1.9
LRRC49-202ENST00000436542 ZC3H6P61129 1189 aaKnown RBP3.2□□□□□ -1.9
LRRC49-202ENST00000436542 CDCA8Q53HL2 280 aa3.2□□□□□ -1.9
LRRC49-202ENST00000436542 TMEM151AQ8N4L1 468 aa3.2□□□□□ -1.9
LRRC49-202ENST00000436542 GIPC2Q8TF65 315 aa3.2□□□□□ -1.9
LRRC49-202ENST00000436542 WASHC4Q2M389 1173 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 TMC2Q8TDI7 906 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 PPP1R1BQ9UD71 204 aaPredicted RBP3.19□□□□□ -1.9
LRRC49-202ENST00000436542 NDUFB9Q9Y6M9 179 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 ANKRD62A6NC57 917 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 PSEN2P49810 448 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 NOM1Q5C9Z4 860 aaKnown RBP3.19□□□□□ -1.9
LRRC49-202ENST00000436542 RIC3Q7Z5B4 369 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 CERS3Q8IU89 383 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 PLPP6Q8IY26 295 aa3.19□□□□□ -1.9
LRRC49-202ENST00000436542 AP1G2O75843 785 aa3.18□□□□□ -1.9
LRRC49-202ENST00000436542 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
LRRC49-202ENST00000436542 SF3A1Q15459 793 aaKnown RBP3.18□□□□□ -1.9
LRRC49-202ENST00000436542 UBE2Q2Q8WVN8 375 aa3.18□□□□□ -1.9
LRRC49-202ENST00000436542 NLRP7Q8WX94 980 aa3.18□□□□□ -1.9
LRRC49-202ENST00000436542 HIRIP3Q9BW71 556 aaPredicted RBP3.18□□□□□ -1.9
LRRC49-202ENST00000436542 TFIP11Q9UBB9 837 aaKnown RBP3.18□□□□□ -1.9
LRRC49-202ENST00000436542 VAC14Q08AM6 782 aa3.18□□□□□ -1.9
LRRC49-202ENST00000436542 UCN2Q96RP3 112 aa3.18□□□□□ -1.9
LRRC49-202ENST00000436542 CDHR5Q9HBB8 845 aa3.18□□□□□ -1.9
LRRC49-202ENST00000436542 KDM4AO75164 1064 aa3.17□□□□□ -1.9
LRRC49-202ENST00000436542 USP17L8P0C7I0 530 aa3.17□□□□□ -1.9
LRRC49-202ENST00000436542 VAMP1P23763 118 aa3.17□□□□□ -1.9
LRRC49-202ENST00000436542 CSPP1Q1MSJ5 1256 aa3.17□□□□□ -1.9
LRRC49-202ENST00000436542 TUSC1Q2TAM9 212 aa3.17□□□□□ -1.9
LRRC49-202ENST00000436542 NAALADL2Q58DX5 795 aa3.17□□□□□ -1.9
LRRC49-202ENST00000436542 UPF1Q92900 1129 aaKnown RBP eCLIP3.17□□□□□ -1.9
LRRC49-202ENST00000436542 GJD4Q96KN9 370 aaPredicted RBP3.17□□□□□ -1.9
LRRC49-202ENST00000436542 ALG2Q9H553 416 aa3.17□□□□□ -1.9
LRRC49-202ENST00000436542 NPDC1Q9NQX5 325 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms