RNA–Protein interactions for RNA: ENST00000436542.6

LRRC49-202, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 2,294 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-202ENST00000436542 POTEDQ86YR6 584 aa10.02□□□□□ -0.81
LRRC49-202ENST00000436542 AEBP2Q6ZN18 517 aaPredicted RBP8.94□□□□□ -0.98
LRRC49-202ENST00000436542 CHIC1Q5VXU3 224 aa8.55□□□□□ -1.04
LRRC49-202ENST00000436542 SENP3Q9H4L4 574 aaPredicted RBP7.96□□□□□ -1.13
LRRC49-202ENST00000436542 PHF23Q9BUL5 403 aaPredicted RBP7.64□□□□□ -1.19
LRRC49-202ENST00000436542 POTEHQ6S545 545 aa7.47□□□□□ -1.21
LRRC49-202ENST00000436542 MSH5O43196 834 aa7.45□□□□□ -1.22
LRRC49-202ENST00000436542 FOXD1Q16676 465 aa7.41□□□□□ -1.22
LRRC49-202ENST00000436542 PLSCR2Q9NRY7 297 aa7.02□□□□□ -1.29
LRRC49-202ENST00000436542 CACNB1Q02641 598 aaPredicted RBP6.96□□□□□ -1.3
LRRC49-202ENST00000436542 PIAS4Q8N2W9 510 aaPredicted RBP6.78□□□□□ -1.32
LRRC49-202ENST00000436542 RNF39Q9H2S5 420 aa6.18□□□□□ -1.42
LRRC49-202ENST00000436542 PPP6R1Q9UPN7 881 aa6.14□□□□□ -1.43
LRRC49-202ENST00000436542 DMRT2Q9Y5R5 561 aa6.12□□□□□ -1.43
LRRC49-202ENST00000436542 C1QBPQ07021 282 aaKnown RBP6.11□□□□□ -1.43
LRRC49-202ENST00000436542 ADRA2BP18089 450 aa6.1□□□□□ -1.43
LRRC49-202ENST00000436542 SP7Q8TDD2 431 aaPredicted RBP6.01□□□□□ -1.45
LRRC49-202ENST00000436542 DCAF8L1A6NGE4 600 aa5.96□□□□□ -1.46
LRRC49-202ENST00000436542 MAPK8IP2Q13387 824 aaPredicted RBP5.86□□□□□ -1.47
LRRC49-202ENST00000436542 SCAF1Q9H7N4 1312 aaKnown RBP5.8□□□□□ -1.48
LRRC49-202ENST00000436542 PLPPR3Q6T4P5 718 aa5.79□□□□□ -1.48
LRRC49-202ENST00000436542 PCDH10Q9P2E7 1040 aa5.78□□□□□ -1.48
LRRC49-202ENST00000436542 DNAJC5BQ9UF47 199 aa5.67□□□□□ -1.5
LRRC49-202ENST00000436542 LHX8Q68G74 356 aa5.6□□□□□ -1.51
LRRC49-202ENST00000436542 CHRDL2Q6WN34 429 aa5.54□□□□□ -1.52
LRRC49-202ENST00000436542 HOXD11P31277 338 aaPredicted RBP5.51□□□□□ -1.53
LRRC49-202ENST00000436542 DSG3P32926 999 aa5.46□□□□□ -1.54
LRRC49-202ENST00000436542 HAX1O00165 279 aa5.39□□□□□ -1.55
LRRC49-202ENST00000436542 RBM42Q9BTD8 480 aaKnown RBP5.38□□□□□ -1.55
LRRC49-202ENST00000436542 POTEMA6NI47 508 aa5.34□□□□□ -1.56
LRRC49-202ENST00000436542 CAPN15O75808 1086 aa5.32□□□□□ -1.56
LRRC49-202ENST00000436542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.31□□□□□ -1.56
LRRC49-202ENST00000436542 RNF216Q9NWF9 866 aaPredicted RBP5.26□□□□□ -1.57
LRRC49-202ENST00000436542 POTEGQ6S5H5 508 aa5.23□□□□□ -1.57
LRRC49-202ENST00000436542 SPINK5Q9NQ38 1064 aaPredicted RBP5.18□□□□□ -1.58
LRRC49-202ENST00000436542 PIP4P2Q8N4L2 257 aa5.16□□□□□ -1.58
LRRC49-202ENST00000436542 EHMT2Q96KQ7 1210 aa5.12□□□□□ -1.59
LRRC49-202ENST00000436542 EVX2Q03828 476 aa5.08□□□□□ -1.6
LRRC49-202ENST00000436542 CNKSR2Q8WXI2 1034 aa5.07□□□□□ -1.6
LRRC49-202ENST00000436542 ABCB7O75027 752 aa5.05□□□□□ -1.6
LRRC49-202ENST00000436542 SLC24A1O60721 1099 aa5.03□□□□□ -1.6
LRRC49-202ENST00000436542 GABBR2O75899 941 aa5.03□□□□□ -1.6
LRRC49-202ENST00000436542 ZNF219Q9P2Y4 722 aaPredicted RBP5.02□□□□□ -1.61
LRRC49-202ENST00000436542 APLP2Q06481 763 aa5□□□□□ -1.61
LRRC49-202ENST00000436542 U3KPZ7 1027 aaPredicted RBP5□□□□□ -1.61
LRRC49-202ENST00000436542 TRHP20396 242 aaPredicted RBP4.99□□□□□ -1.61
LRRC49-202ENST00000436542 FXR2P51116 673 aaKnown RBP eCLIP4.99□□□□□ -1.61
LRRC49-202ENST00000436542 AKT1S1Q96B36 256 aa4.99□□□□□ -1.61
LRRC49-202ENST00000436542 KCNA4P22459 653 aa4.89□□□□□ -1.63
LRRC49-202ENST00000436542 PPP4R3CPQ6ZMV5 832 aa4.89□□□□□ -1.63
LRRC49-202ENST00000436542 REM2Q8IYK8 340 aaPredicted RBP4.89□□□□□ -1.63
LRRC49-202ENST00000436542 C19orf67A6NJJ6 358 aa4.88□□□□□ -1.63
LRRC49-202ENST00000436542 CLCN6P51797 869 aa4.87□□□□□ -1.63
LRRC49-202ENST00000436542 OTUD5Q96G74 571 aa4.87□□□□□ -1.63
LRRC49-202ENST00000436542 CSRNP3Q8WYN3 585 aa4.84□□□□□ -1.64
LRRC49-202ENST00000436542 PITPNM1O00562 1244 aa4.83□□□□□ -1.64
LRRC49-202ENST00000436542 POTEIP0CG38 1075 aa4.83□□□□□ -1.64
LRRC49-202ENST00000436542 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
LRRC49-202ENST00000436542 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
LRRC49-202ENST00000436542 DCBLD2Q96PD2 775 aa4.78□□□□□ -1.64
LRRC49-202ENST00000436542 CDAN1Q8IWY9 1227 aa4.75□□□□□ -1.65
LRRC49-202ENST00000436542 RTN4Q9NQC3 1192 aaKnown RBP4.74□□□□□ -1.65
LRRC49-202ENST00000436542 MMRN1Q13201 1228 aa4.74□□□□□ -1.65
LRRC49-202ENST00000436542 SLC4A1APQ9BWU0 796 aaKnown RBP4.74□□□□□ -1.65
LRRC49-202ENST00000436542 PRKAR2AP13861 404 aaKnown RBP4.73□□□□□ -1.65
LRRC49-202ENST00000436542 AMER1Q5JTC6 1135 aaPredicted RBP4.72□□□□□ -1.65
LRRC49-202ENST00000436542 FAM163AQ96GL9 167 aaPredicted RBP4.72□□□□□ -1.65
LRRC49-202ENST00000436542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.72□□□□□ -1.65
LRRC49-202ENST00000436542 HNRNPUL2Q1KMD3 747 aaKnown RBP4.72□□□□□ -1.65
LRRC49-202ENST00000436542 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
LRRC49-202ENST00000436542 MAMSTRQ6ZN01 415 aa4.66□□□□□ -1.66
LRRC49-202ENST00000436542 SPNS2Q8IVW8 549 aa4.63□□□□□ -1.67
LRRC49-202ENST00000436542 POTEB2H3BUK9 544 aa4.63□□□□□ -1.67
LRRC49-202ENST00000436542 POLA2Q14181 598 aa4.62□□□□□ -1.67
LRRC49-202ENST00000436542 SAMD1Q6SPF0 538 aaPredicted RBP4.6□□□□□ -1.67
LRRC49-202ENST00000436542 ZBTB12Q9Y330 459 aaPredicted RBP4.6□□□□□ -1.67
LRRC49-202ENST00000436542 SCUBE2Q9NQ36 999 aa4.55□□□□□ -1.68
LRRC49-202ENST00000436542 NCBP3Q53F19 620 aaKnown RBP4.55□□□□□ -1.68
LRRC49-202ENST00000436542 CD44P16070 742 aaKnown RBP4.53□□□□□ -1.68
LRRC49-202ENST00000436542 ZBTB22O15209 634 aa4.51□□□□□ -1.69
LRRC49-202ENST00000436542 XP32Q5T750 250 aa4.5□□□□□ -1.69
LRRC49-202ENST00000436542 OSCARQ8IYS5 282 aa4.49□□□□□ -1.69
LRRC49-202ENST00000436542 SPDYE1Q8NFV5 336 aaPredicted RBP4.48□□□□□ -1.69
LRRC49-202ENST00000436542 CLEC11AQ9Y240 323 aa4.48□□□□□ -1.69
LRRC49-202ENST00000436542 NPM3O75607 178 aaKnown RBP4.44□□□□□ -1.7
LRRC49-202ENST00000436542 ZNF579Q8NAF0 562 aaKnown RBP4.42□□□□□ -1.7
LRRC49-202ENST00000436542 METRNQ9UJH8 293 aa4.42□□□□□ -1.7
LRRC49-202ENST00000436542 C7P10643 843 aa4.41□□□□□ -1.7
LRRC49-202ENST00000436542 CHADLQ6NUI6 762 aa4.41□□□□□ -1.7
LRRC49-202ENST00000436542 POTEJP0CG39 1038 aa4.4□□□□□ -1.71
LRRC49-202ENST00000436542 SLC39A7Q92504 469 aa4.4□□□□□ -1.71
LRRC49-202ENST00000436542 PRKCSHP14314 528 aaPredicted RBP4.38□□□□□ -1.71
LRRC49-202ENST00000436542 FOXD4L1Q9NU39 408 aa4.37□□□□□ -1.71
LRRC49-202ENST00000436542 GALR2O43603 387 aaPredicted RBP4.37□□□□□ -1.71
LRRC49-202ENST00000436542 FKBP8Q14318 412 aa4.35□□□□□ -1.71
LRRC49-202ENST00000436542 ST18O60284 1047 aa4.34□□□□□ -1.71
LRRC49-202ENST00000436542 PLCB2Q00722 1185 aa4.34□□□□□ -1.72
LRRC49-202ENST00000436542 BCANQ96GW7 911 aa4.34□□□□□ -1.72
LRRC49-202ENST00000436542 DAXXQ9UER7 740 aaPredicted RBP4.33□□□□□ -1.72
LRRC49-202ENST00000436542 TMEM121BQ9BXQ6 578 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms