RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 PRDM9Q9NQV7 894 aa7.11□□□□□ -1.27
R3HDM1-207ENST00000436436 CLCN1P35523 988 aa7.1□□□□□ -1.27
R3HDM1-207ENST00000436436 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
R3HDM1-207ENST00000436436 USB1Q9BQ65 265 aaKnown RBP7.1□□□□□ -1.27
R3HDM1-207ENST00000436436 TOR4AQ9NXH8 423 aa7.1□□□□□ -1.27
R3HDM1-207ENST00000436436 AVPP01185 164 aa7.09□□□□□ -1.27
R3HDM1-207ENST00000436436 CCDC102AQ96A19 550 aa7.09□□□□□ -1.27
R3HDM1-207ENST00000436436 GPCPD1Q9NPB8 672 aa7.09□□□□□ -1.27
R3HDM1-207ENST00000436436 AAASQ9NRG9 546 aa7.09□□□□□ -1.27
R3HDM1-207ENST00000436436 WNT7AO00755 349 aa7.08□□□□□ -1.28
R3HDM1-207ENST00000436436 DXOO77932 396 aaKnown RBP7.08□□□□□ -1.28
R3HDM1-207ENST00000436436 CTC1Q2NKJ3 1217 aa7.08□□□□□ -1.28
R3HDM1-207ENST00000436436 ZNF775Q96BV0 537 aaPredicted RBP7.08□□□□□ -1.28
R3HDM1-207ENST00000436436 HOXA2O43364 376 aa7.07□□□□□ -1.28
R3HDM1-207ENST00000436436 TRIM32Q13049 653 aa7.07□□□□□ -1.28
R3HDM1-207ENST00000436436 SMCPP49901 116 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-207ENST00000436436 KRI1Q8N9T8 703 aaKnown RBP7.06□□□□□ -1.28
R3HDM1-207ENST00000436436 FAM217BQ9NTX9 383 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-207ENST00000436436 TTC24A2A3L6 582 aaPredicted RBP7.05□□□□□ -1.28
R3HDM1-207ENST00000436436 ST8SIA5O15466 376 aa7.05□□□□□ -1.28
R3HDM1-207ENST00000436436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.05□□□□□ -1.28
R3HDM1-207ENST00000436436 SNIP1Q8TAD8 396 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-207ENST00000436436 REPIN1Q9BWE0 567 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-207ENST00000436436 AXIN1O15169 862 aa7.04□□□□□ -1.28
R3HDM1-207ENST00000436436 NUTM1Q86Y26 1132 aa7.04□□□□□ -1.28
R3HDM1-207ENST00000436436 POTECB2RU33 542 aa7.03□□□□□ -1.28
R3HDM1-207ENST00000436436 JUNDP17535 347 aa7.02□□□□□ -1.29
R3HDM1-207ENST00000436436 WNT7BP56706 349 aa7.02□□□□□ -1.29
R3HDM1-207ENST00000436436 RETREG3Q86VR2 466 aa7.02□□□□□ -1.29
R3HDM1-207ENST00000436436 CCDC24Q8N4L8 307 aa7.01□□□□□ -1.29
R3HDM1-207ENST00000436436 SMPD1P17405 629 aa7□□□□□ -1.29
R3HDM1-207ENST00000436436 HLA-CQ95604 372 aa7□□□□□ -1.29
R3HDM1-207ENST00000436436 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
R3HDM1-207ENST00000436436 FDX1P10109 184 aa6.99□□□□□ -1.29
R3HDM1-207ENST00000436436 RC3H1Q5TC82 1133 aaKnown RBP6.99□□□□□ -1.29
R3HDM1-207ENST00000436436 BARGINQ6ZT62 677 aa6.99□□□□□ -1.29
R3HDM1-207ENST00000436436 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-207ENST00000436436 GUCA2AQ02747 115 aa6.98□□□□□ -1.29
R3HDM1-207ENST00000436436 AMHR2Q16671 573 aa6.98□□□□□ -1.29
R3HDM1-207ENST00000436436 NUDT12Q9BQG2 462 aa6.98□□□□□ -1.29
R3HDM1-207ENST00000436436 C11orf95C9JLR9 678 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-207ENST00000436436 ZMYND10O75800 440 aa6.97□□□□□ -1.29
R3HDM1-207ENST00000436436 TREML4Q6UXN2 200 aa6.97□□□□□ -1.29
R3HDM1-207ENST00000436436 GMPR2Q9P2T1 348 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-207ENST00000436436 DACH1Q9UI36 760 aa6.97□□□□□ -1.29
R3HDM1-207ENST00000436436 SPDYE5A6NIY4 337 aa6.96□□□□□ -1.3
R3HDM1-207ENST00000436436 C6orf229H3BNL8 230 aa6.96□□□□□ -1.3
R3HDM1-207ENST00000436436 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.3
R3HDM1-207ENST00000436436 SPIRE2Q8WWL2 714 aa6.96□□□□□ -1.3
R3HDM1-207ENST00000436436 SYMPKQ92797 1274 aaKnown RBP6.96□□□□□ -1.3
R3HDM1-207ENST00000436436 SENP2Q9HC62 589 aa6.96□□□□□ -1.3
R3HDM1-207ENST00000436436 J3QL48 77 aa6.95□□□□□ -1.3
R3HDM1-207ENST00000436436 MS4A1P11836 297 aa6.95□□□□□ -1.3
R3HDM1-207ENST00000436436 GJA5P36382 358 aa6.95□□□□□ -1.3
R3HDM1-207ENST00000436436 SKOR1P84550 965 aa6.95□□□□□ -1.3
R3HDM1-207ENST00000436436 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
R3HDM1-207ENST00000436436 PCDHGC3Q9UN70 934 aa6.95□□□□□ -1.3
R3HDM1-207ENST00000436436 CCNYL3P0C7X3 344 aa6.94□□□□□ -1.3
R3HDM1-207ENST00000436436 PTPRNQ16849 979 aa6.94□□□□□ -1.3
R3HDM1-207ENST00000436436 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
R3HDM1-207ENST00000436436 ATP13A2Q9NQ11 1180 aa6.94□□□□□ -1.3
R3HDM1-207ENST00000436436 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-207ENST00000436436 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
R3HDM1-207ENST00000436436 KIFC2Q96AC6 838 aa6.93□□□□□ -1.3
R3HDM1-207ENST00000436436 MTMR2Q13614 643 aa6.92□□□□□ -1.3
R3HDM1-207ENST00000436436 GIGYF2Q6Y7W6 1299 aaKnown RBP6.92□□□□□ -1.3
R3HDM1-207ENST00000436436 EHBP1Q8NDI1 1231 aa6.92□□□□□ -1.3
R3HDM1-207ENST00000436436 HPS1Q92902 700 aa6.92□□□□□ -1.3
R3HDM1-207ENST00000436436 TRIM47Q96LD4 638 aa6.92□□□□□ -1.3
R3HDM1-207ENST00000436436 EVA1BQ9NVM1 165 aa6.92□□□□□ -1.3
R3HDM1-207ENST00000436436 MOXD2PA6NHM9 499 aa6.91□□□□□ -1.3
R3HDM1-207ENST00000436436 SIAH2O43255 324 aa6.91□□□□□ -1.3
R3HDM1-207ENST00000436436 ALDH1A1P00352 501 aa6.91□□□□□ -1.3
R3HDM1-207ENST00000436436 PTCRAQ6ISU1 281 aaPredicted RBP6.91□□□□□ -1.3
R3HDM1-207ENST00000436436 WFS1O76024 890 aa6.9□□□□□ -1.3
R3HDM1-207ENST00000436436 NDUFV2P19404 249 aa6.9□□□□□ -1.3
R3HDM1-207ENST00000436436 KCNH2Q12809 1159 aa6.9□□□□□ -1.3
R3HDM1-207ENST00000436436 PRR7Q8TB68 274 aa6.9□□□□□ -1.3
R3HDM1-207ENST00000436436 BEGAINQ9BUH8 593 aa6.9□□□□□ -1.3
R3HDM1-207ENST00000436436 SH3BP2P78314 561 aa6.89□□□□□ -1.31
R3HDM1-207ENST00000436436 UNC93B1Q9H1C4 597 aa6.89□□□□□ -1.31
R3HDM1-207ENST00000436436 MPNDQ8N594 471 aa6.88□□□□□ -1.31
R3HDM1-207ENST00000436436 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
R3HDM1-207ENST00000436436 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
R3HDM1-207ENST00000436436 PLEKHG3A1L390 1219 aa6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 SPTLC1O15269 473 aa6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 SNRPBP14678 240 aaKnown RBP6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 NFX1Q12986 1120 aaKnown RBP6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 RSBN1LQ6PCB5 846 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 PARP9Q8IXQ6 854 aa6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 AK7Q96M32 723 aa6.87□□□□□ -1.31
R3HDM1-207ENST00000436436 TRIM66O15016 1216 aa6.86□□□□□ -1.31
R3HDM1-207ENST00000436436 WIPF1O43516 503 aa6.86□□□□□ -1.31
R3HDM1-207ENST00000436436 PRPF38BQ5VTL8 546 aaKnown RBP6.86□□□□□ -1.31
R3HDM1-207ENST00000436436 LYPD8Q6UX82 237 aa6.86□□□□□ -1.31
R3HDM1-207ENST00000436436 ZNF511Q8NB15 262 aa6.86□□□□□ -1.31
R3HDM1-207ENST00000436436 BAP1Q92560 729 aa6.85□□□□□ -1.31
R3HDM1-207ENST00000436436 ZBTB3Q9H5J0 574 aa6.85□□□□□ -1.31
R3HDM1-207ENST00000436436 TERTO14746 1132 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms