RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 BCAR3O75815 825 aa27.11■■□□□ 1.93
TOP2B-204ENST00000435706 SYNE3Q6ZMZ3 975 aa27.11■■□□□ 1.93
TOP2B-204ENST00000435706 NAT10Q9H0A0 1025 aaKnown RBP27.1■■□□□ 1.93
TOP2B-204ENST00000435706 FKBP5Q13451 457 aaPredicted RBP27.1■■□□□ 1.93
TOP2B-204ENST00000435706 NEK4P51957 841 aa27.1■■□□□ 1.93
TOP2B-204ENST00000435706 TCP11L2Q8N4U5 519 aa27.09■■□□□ 1.93
TOP2B-204ENST00000435706 MCM2P49736 904 aa27.09■■□□□ 1.93
TOP2B-204ENST00000435706 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
TOP2B-204ENST00000435706 VGFO15240 615 aaPredicted RBP27.08■■□□□ 1.93
TOP2B-204ENST00000435706 LRRFIP1Q32MZ4 808 aaKnown RBP27.08■■□□□ 1.93
TOP2B-204ENST00000435706 PATL2C9JE40 543 aaKnown RBP27.08■■□□□ 1.92
TOP2B-204ENST00000435706 CCDC27Q2M243 656 aa27.08■■□□□ 1.92
TOP2B-204ENST00000435706 PCMTD1Q96MG8 357 aaPredicted RBP27.08■■□□□ 1.92
TOP2B-204ENST00000435706 NUTM2FA1L443 756 aa27.07■■□□□ 1.92
TOP2B-204ENST00000435706 K7ELQ4 463 aaPredicted RBP27.07■■□□□ 1.92
TOP2B-204ENST00000435706 MINK1Q8N4C8 1332 aaPredicted RBP27.07■■□□□ 1.92
TOP2B-204ENST00000435706 EIF2S2P20042 333 aaKnown RBP27.07■■□□□ 1.92
TOP2B-204ENST00000435706 NECTIN2Q92692 538 aa27.07■■□□□ 1.92
TOP2B-204ENST00000435706 AK7Q96M32 723 aa27.07■■□□□ 1.92
TOP2B-204ENST00000435706 CWC22Q9HCG8 908 aaKnown RBP27.07■■□□□ 1.92
TOP2B-204ENST00000435706 ERC2O15083 957 aa27.06■■□□□ 1.92
TOP2B-204ENST00000435706 FOSBP53539 338 aa27.06■■□□□ 1.92
TOP2B-204ENST00000435706 MARCH6O60337 910 aa27.05■■□□□ 1.92
TOP2B-204ENST00000435706 RUFY1Q96T51 708 aa27.05■■□□□ 1.92
TOP2B-204ENST00000435706 HSP90AB4PQ58FF6 505 aa27.05■■□□□ 1.92
TOP2B-204ENST00000435706 NINLQ9Y2I6 1382 aa27.05■■□□□ 1.92
TOP2B-204ENST00000435706 NCBP3Q53F19 620 aaKnown RBP27.04■■□□□ 1.92
TOP2B-204ENST00000435706 GCC1Q96CN9 775 aa27.04■■□□□ 1.92
TOP2B-204ENST00000435706 CIZ1Q9ULV3 898 aaPredicted RBP27.04■■□□□ 1.92
TOP2B-204ENST00000435706 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
TOP2B-204ENST00000435706 NEXNQ0ZGT2 675 aa27.03■■□□□ 1.92
TOP2B-204ENST00000435706 SPC24Q8NBT2 197 aa27.03■■□□□ 1.92
TOP2B-204ENST00000435706 G3BP1Q13283 466 aaKnown RBP eCLIP27.02■■□□□ 1.921e-6■□□□□ 9.8
TOP2B-204ENST00000435706 TEFQ10587 303 aa27.02■■□□□ 1.92
TOP2B-204ENST00000435706 SDF4Q9BRK5 362 aa27.02■■□□□ 1.92
TOP2B-204ENST00000435706 WDR97A6NE52 1622 aa27.02■■□□□ 1.92
TOP2B-204ENST00000435706 ZNF644Q9H582 1327 aaPredicted RBP27.01■■□□□ 1.92
TOP2B-204ENST00000435706 ZSCAN30Q86W11 494 aa27.01■■□□□ 1.91
TOP2B-204ENST00000435706 FIBPO43427 364 aa27.01■■□□□ 1.91
TOP2B-204ENST00000435706 EXOSC9Q06265 439 aaKnown RBP27■■□□□ 1.91
TOP2B-204ENST00000435706 IGF1RP08069 1367 aa27■■□□□ 1.91
TOP2B-204ENST00000435706 PODXL2Q9NZ53 605 aa26.99■■□□□ 1.91
TOP2B-204ENST00000435706 HMOX1P09601 288 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 MPNDQ8N594 471 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 MTHFSP49914 203 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 NBPF8Q3BBV2 869 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 STAC3Q96MF2 364 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 NCOA2Q15596 1464 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 PDILTQ8N807 584 aa26.98■■□□□ 1.91
TOP2B-204ENST00000435706 PSMA5P28066 241 aa26.97■■□□□ 1.91
TOP2B-204ENST00000435706 OLFM4Q6UX06 510 aa26.97■■□□□ 1.91
TOP2B-204ENST00000435706 ATAD2BQ9ULI0 1458 aa26.97■■□□□ 1.91
TOP2B-204ENST00000435706 C1orf141Q5JVX7 400 aa26.97■■□□□ 1.91
TOP2B-204ENST00000435706 CCDC47Q96A33 483 aaKnown RBP26.97■■□□□ 1.91
TOP2B-204ENST00000435706 CCDC112Q8NEF3 446 aa26.97■■□□□ 1.91
TOP2B-204ENST00000435706 TRDNQ13061 729 aa26.96■■□□□ 1.91
TOP2B-204ENST00000435706 TSPYL4Q9UJ04 414 aa26.96■■□□□ 1.91
TOP2B-204ENST00000435706 ERCC4Q92889 916 aaPredicted RBP26.96■■□□□ 1.91
TOP2B-204ENST00000435706 C1orf115Q9H7X2 142 aa26.96■■□□□ 1.91
TOP2B-204ENST00000435706 ANKRD50Q9ULJ7 1429 aa26.95■■□□□ 1.91
TOP2B-204ENST00000435706 CCP110O43303 1012 aa26.95■■□□□ 1.9
TOP2B-204ENST00000435706 SMC2O95347 1197 aa26.95■■□□□ 1.9
TOP2B-204ENST00000435706 CNTROBQ8N137 903 aa26.95■■□□□ 1.9
TOP2B-204ENST00000435706 FYCO1Q9BQS8 1478 aa26.95■■□□□ 1.9
TOP2B-204ENST00000435706 CCDC192P0DO97 292 aa26.94■■□□□ 1.9
TOP2B-204ENST00000435706 NOB1Q9ULX3 412 aaKnown RBP26.94■■□□□ 1.9
TOP2B-204ENST00000435706 KINO60870 393 aaKnown RBP26.94■■□□□ 1.9
TOP2B-204ENST00000435706 GGNBP2Q9H3C7 697 aa26.94■■□□□ 1.9
TOP2B-204ENST00000435706 PDCP20941 246 aa26.93■■□□□ 1.9
TOP2B-204ENST00000435706 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
TOP2B-204ENST00000435706 APPP05067 770 aa26.93■■□□□ 1.9
TOP2B-204ENST00000435706 CDR1P51861 262 aa26.93■■□□□ 1.9
TOP2B-204ENST00000435706 CASKIN1Q8WXD9 1431 aa26.92■■□□□ 1.9
TOP2B-204ENST00000435706 LEKR1Q6ZMV7 388 aa26.92■■□□□ 1.9
TOP2B-204ENST00000435706 H0YHG0 523 aa26.91■■□□□ 1.9
TOP2B-204ENST00000435706 UBTFL1P0CB47 393 aaPredicted RBP26.91■■□□□ 1.9
TOP2B-204ENST00000435706 MVPQ14764 893 aaKnown RBP26.91■■□□□ 1.9
TOP2B-204ENST00000435706 WDR33Q9C0J8 1336 aaKnown RBP26.91■■□□□ 1.9
TOP2B-204ENST00000435706 NFXL1Q6ZNB6 911 aa26.91■■□□□ 1.9
TOP2B-204ENST00000435706 DDX58O95786 925 aaKnown RBP26.9■■□□□ 1.9
TOP2B-204ENST00000435706 VPS53Q5VIR6 699 aa26.9■■□□□ 1.9
TOP2B-204ENST00000435706 SAFBQ15424 915 aaKnown RBP eCLIP26.89■■□□□ 1.9
TOP2B-204ENST00000435706 EID1Q9Y6B2 187 aa26.89■■□□□ 1.89
TOP2B-204ENST00000435706 TSR2Q969E8 191 aaKnown RBP26.88■■□□□ 1.89
TOP2B-204ENST00000435706 CHD1LQ86WJ1 897 aa26.87■■□□□ 1.89
TOP2B-204ENST00000435706 FMNL2Q96PY5 1086 aa26.87■■□□□ 1.89
TOP2B-204ENST00000435706 GNAI3P08754 354 aa26.86■■□□□ 1.89
TOP2B-204ENST00000435706 CAGE1Q8TC20 777 aa26.86■■□□□ 1.89
TOP2B-204ENST00000435706 NAP1L1P55209 391 aaKnown RBP26.85■■□□□ 1.89
TOP2B-204ENST00000435706 PDCL2Q8N4E4 241 aa26.85■■□□□ 1.89
TOP2B-204ENST00000435706 TNMDQ9H2S6 317 aa26.84■■□□□ 1.89
TOP2B-204ENST00000435706 CT47B1P0C2W7 299 aaPredicted RBP26.84■■□□□ 1.89
TOP2B-204ENST00000435706 ATF7IPQ6VMQ6 1270 aa26.84■■□□□ 1.89
TOP2B-204ENST00000435706 RALYLQ86SE5 291 aaKnown RBP26.84■■□□□ 1.89
TOP2B-204ENST00000435706 WDR63Q8IWG1 891 aa26.84■■□□□ 1.89
TOP2B-204ENST00000435706 TTLL5Q6EMB2 1281 aa26.84■■□□□ 1.89
TOP2B-204ENST00000435706 SKAP1Q86WV1 359 aa26.83■■□□□ 1.89
TOP2B-204ENST00000435706 FSD1Q9BTV5 496 aa26.83■■□□□ 1.89
TOP2B-204ENST00000435706 SURF6O75683 361 aaKnown RBP26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms