RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 MORC1Q86VD1 984 aa19.42■□□□□ 0.7
RFTN1-203ENST00000432519 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
RFTN1-203ENST00000432519 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
RFTN1-203ENST00000432519 PRAM1Q96QH2 718 aa19.4■□□□□ 0.7
RFTN1-203ENST00000432519 STAG3Q9UJ98 1225 aa19.4■□□□□ 0.7
RFTN1-203ENST00000432519 KIF13AQ9H1H9 1805 aa19.4■□□□□ 0.7
RFTN1-203ENST00000432519 PTPRMP28827 1452 aa19.4■□□□□ 0.7
RFTN1-203ENST00000432519 C20orf194Q5TEA3 1177 aa19.39■□□□□ 0.7
RFTN1-203ENST00000432519 AGLP35573 1532 aa19.39■□□□□ 0.69
RFTN1-203ENST00000432519 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
RFTN1-203ENST00000432519 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
RFTN1-203ENST00000432519 GOLGA2Q08379 1002 aa19.38■□□□□ 0.69
RFTN1-203ENST00000432519 YTHDC2Q9H6S0 1430 aaKnown RBP19.37■□□□□ 0.69
RFTN1-203ENST00000432519 POLR3AO14802 1390 aaPredicted RBP19.37■□□□□ 0.69
RFTN1-203ENST00000432519 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
RFTN1-203ENST00000432519 ANKRD36BQ8N2N9 1353 aa19.36■□□□□ 0.69
RFTN1-203ENST00000432519 MTHFSP49914 203 aa19.36■□□□□ 0.69
RFTN1-203ENST00000432519 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
RFTN1-203ENST00000432519 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
RFTN1-203ENST00000432519 SLFN5Q08AF3 891 aa19.35■□□□□ 0.69
RFTN1-203ENST00000432519 CGNL1Q0VF96 1302 aa19.35■□□□□ 0.69
RFTN1-203ENST00000432519 A0A1W2PP64 1363 aa19.35■□□□□ 0.69
RFTN1-203ENST00000432519 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
RFTN1-203ENST00000432519 MSH5O43196 834 aa19.34■□□□□ 0.69
RFTN1-203ENST00000432519 POGKQ9P215 609 aa19.34■□□□□ 0.69
RFTN1-203ENST00000432519 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.68
RFTN1-203ENST00000432519 SPATA31D1Q6ZQQ2 1576 aa19.32■□□□□ 0.68
RFTN1-203ENST00000432519 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
RFTN1-203ENST00000432519 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
RFTN1-203ENST00000432519 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
RFTN1-203ENST00000432519 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
RFTN1-203ENST00000432519 USP32Q8NFA0 1604 aa19.31■□□□□ 0.68
RFTN1-203ENST00000432519 NEUROD2Q15784 382 aa19.31■□□□□ 0.68
RFTN1-203ENST00000432519 ARHGEF40Q8TER5 1519 aa19.31■□□□□ 0.68
RFTN1-203ENST00000432519 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
RFTN1-203ENST00000432519 CD163L1Q9NR16 1453 aa19.29■□□□□ 0.68
RFTN1-203ENST00000432519 SKAP1Q86WV1 359 aa19.29■□□□□ 0.68
RFTN1-203ENST00000432519 RIMS2Q9UQ26 1411 aa19.29■□□□□ 0.68
RFTN1-203ENST00000432519 CDK19Q9BWU1 502 aa19.28■□□□□ 0.68
RFTN1-203ENST00000432519 ZMYM3Q14202 1370 aa19.28■□□□□ 0.68
RFTN1-203ENST00000432519 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
RFTN1-203ENST00000432519 MYT1Q01538 1121 aa19.27■□□□□ 0.67
RFTN1-203ENST00000432519 ABCC11Q96J66 1382 aa19.27■□□□□ 0.67
RFTN1-203ENST00000432519 CABP1Q9NZU7 370 aa19.26■□□□□ 0.67
RFTN1-203ENST00000432519 FYB1O15117 783 aa19.26■□□□□ 0.67
RFTN1-203ENST00000432519 BCAR3O75815 825 aa19.25■□□□□ 0.67
RFTN1-203ENST00000432519 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
RFTN1-203ENST00000432519 TCP11L2Q8N4U5 519 aa19.25■□□□□ 0.67
RFTN1-203ENST00000432519 METP08581 1390 aa19.24■□□□□ 0.67
RFTN1-203ENST00000432519 FANCIQ9NVI1 1328 aa19.24■□□□□ 0.67
RFTN1-203ENST00000432519 FBLN1P23142 703 aa19.23■□□□□ 0.67
RFTN1-203ENST00000432519 NRXN3Q9Y4C0 1643 aa19.23■□□□□ 0.67
RFTN1-203ENST00000432519 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
RFTN1-203ENST00000432519 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
RFTN1-203ENST00000432519 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
RFTN1-203ENST00000432519 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
RFTN1-203ENST00000432519 E9PSI1 815 aa19.22■□□□□ 0.67
RFTN1-203ENST00000432519 ESF1Q9H501 851 aaKnown RBP19.21■□□□□ 0.67
RFTN1-203ENST00000432519 NSD2O96028 1365 aa19.21■□□□□ 0.67
RFTN1-203ENST00000432519 IQSEC2Q5JU85 1478 aa19.21■□□□□ 0.67
RFTN1-203ENST00000432519 U2AF1L5P0DN76 240 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-203ENST00000432519 U2AF1Q01081 240 aaKnown RBP eCLIP19.2■□□□□ 0.66
RFTN1-203ENST00000432519 NCKAP5LQ9HCH0 1330 aa19.2■□□□□ 0.66
RFTN1-203ENST00000432519 TXNDC2Q86VQ3 553 aa19.2■□□□□ 0.66
RFTN1-203ENST00000432519 TERF2IPQ9NYB0 399 aa19.2■□□□□ 0.66
RFTN1-203ENST00000432519 NINLQ9Y2I6 1382 aa19.19■□□□□ 0.66
RFTN1-203ENST00000432519 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
RFTN1-203ENST00000432519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.18■□□□□ 0.66
RFTN1-203ENST00000432519 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
RFTN1-203ENST00000432519 CEBPAP49715 358 aaPredicted RBP19.18■□□□□ 0.66
RFTN1-203ENST00000432519 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
RFTN1-203ENST00000432519 U2SURPO15042 1029 aaKnown RBP19.15■□□□□ 0.66
RFTN1-203ENST00000432519 TNRQ92752 1358 aa19.15■□□□□ 0.66
RFTN1-203ENST00000432519 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
RFTN1-203ENST00000432519 COL3A1P02461 1466 aaPredicted RBP19.15■□□□□ 0.66
RFTN1-203ENST00000432519 HDGFL2Q7Z4V5 671 aaPredicted RBP19.14■□□□□ 0.65
RFTN1-203ENST00000432519 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
RFTN1-203ENST00000432519 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
RFTN1-203ENST00000432519 ZRANB1Q9UGI0 708 aa19.12■□□□□ 0.65
RFTN1-203ENST00000432519 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
RFTN1-203ENST00000432519 ANKRD26Q9UPS8 1709 aa19.11■□□□□ 0.65
RFTN1-203ENST00000432519 KDM2BQ8NHM5 1336 aa19.11■□□□□ 0.65
RFTN1-203ENST00000432519 WASLO00401 505 aaPredicted RBP19.11■□□□□ 0.65
RFTN1-203ENST00000432519 LTKP29376 864 aa19.11■□□□□ 0.65
RFTN1-203ENST00000432519 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.1■□□□□ 0.65
RFTN1-203ENST00000432519 BCL2L13Q9BXK5 485 aa19.1■□□□□ 0.65
RFTN1-203ENST00000432519 TNNQ9UQP3 1299 aa19.1■□□□□ 0.65
RFTN1-203ENST00000432519 TMEM2Q9UHN6 1383 aa19.1■□□□□ 0.65
RFTN1-203ENST00000432519 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-203ENST00000432519 MED14O60244 1454 aa19.09■□□□□ 0.65
RFTN1-203ENST00000432519 UBR1Q8IWV7 1749 aa19.09■□□□□ 0.65
RFTN1-203ENST00000432519 PPM1GO15355 546 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-203ENST00000432519 PANK1Q8TE04 598 aa19.08■□□□□ 0.65
RFTN1-203ENST00000432519 NME9Q86XW9 330 aa19.08■□□□□ 0.64
RFTN1-203ENST00000432519 KIF20BQ96Q89 1820 aa19.08■□□□□ 0.64
RFTN1-203ENST00000432519 ADGRB2O60241 1585 aa19.08■□□□□ 0.64
RFTN1-203ENST00000432519 PPIP5K1Q6PFW1 1433 aa19.08■□□□□ 0.64
RFTN1-203ENST00000432519 WDR63Q8IWG1 891 aa19.08■□□□□ 0.64
RFTN1-203ENST00000432519 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
RFTN1-203ENST00000432519 CCDC27Q2M243 656 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms