RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PLEKHH1Q9ULM0 1364 aa21.22■□□□□ 0.99
SMARCE1-205ENST00000431889 ESCO1Q5FWF5 840 aa21.22■□□□□ 0.99
SMARCE1-205ENST00000431889 NGLY1Q96IV0 654 aa21.18■□□□□ 0.98
SMARCE1-205ENST00000431889 SOS2Q07890 1332 aaPredicted RBP21.17■□□□□ 0.98
SMARCE1-205ENST00000431889 FOXO3O43524 673 aa21.17■□□□□ 0.98
SMARCE1-205ENST00000431889 QTRT2Q9H974 415 aaKnown RBP21.17■□□□□ 0.98
SMARCE1-205ENST00000431889 LAMC1P11047 1609 aa21.16■□□□□ 0.98
SMARCE1-205ENST00000431889 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMARCE1-205ENST00000431889 PIK3C2GO75747 1445 aa21.15■□□□□ 0.98
SMARCE1-205ENST00000431889 PRAG1Q86YV5 1406 aa21.15■□□□□ 0.98
SMARCE1-205ENST00000431889 CDC42BPGQ6DT37 1551 aa21.15■□□□□ 0.98
SMARCE1-205ENST00000431889 LRPPRCP42704 1394 aaKnown RBP21.15■□□□□ 0.98
SMARCE1-205ENST00000431889 ANKRD30BQ9BXX2 1392 aa21.15■□□□□ 0.98
SMARCE1-205ENST00000431889 PLEKHG5O94827 1062 aa21.14■□□□□ 0.98
SMARCE1-205ENST00000431889 SAFB2Q14151 953 aaKnown RBP eCLIP21.14■□□□□ 0.98
SMARCE1-205ENST00000431889 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
SMARCE1-205ENST00000431889 CFAP70Q5T0N1 1121 aa21.14■□□□□ 0.97
SMARCE1-205ENST00000431889 RGPD8O14715 1765 aaPredicted RBP21.12■□□□□ 0.97
SMARCE1-205ENST00000431889 KNDC1Q76NI1 1749 aa21.12■□□□□ 0.97
SMARCE1-205ENST00000431889 RGS12O14924 1447 aa21.11■□□□□ 0.97
SMARCE1-205ENST00000431889 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
SMARCE1-205ENST00000431889 PXDNQ92626 1479 aa21.1■□□□□ 0.97
SMARCE1-205ENST00000431889 TECPR2O15040 1411 aa21.09■□□□□ 0.97
SMARCE1-205ENST00000431889 USP21Q9UK80 565 aa21.09■□□□□ 0.97
SMARCE1-205ENST00000431889 NPHP3Q7Z494 1330 aa21.09■□□□□ 0.97
SMARCE1-205ENST00000431889 ABCC11Q96J66 1382 aa21.09■□□□□ 0.97
SMARCE1-205ENST00000431889 FMN2Q9NZ56 1722 aa21.08■□□□□ 0.97
SMARCE1-205ENST00000431889 RBM6P78332 1123 aaKnown RBP21.07■□□□□ 0.96
SMARCE1-205ENST00000431889 KDM2AQ9Y2K7 1162 aa21.07■□□□□ 0.96
SMARCE1-205ENST00000431889 C14orf93Q9H972 538 aaKnown RBP21.06■□□□□ 0.96
SMARCE1-205ENST00000431889 COL22A1Q8NFW1 1626 aaPredicted RBP21.06■□□□□ 0.96
SMARCE1-205ENST00000431889 PRAM1Q96QH2 718 aa21.05■□□□□ 0.96
SMARCE1-205ENST00000431889 CDK12Q9NYV4 1490 aaPredicted RBP21.03■□□□□ 0.96
SMARCE1-205ENST00000431889 MYOM2P54296 1465 aa21.03■□□□□ 0.96
SMARCE1-205ENST00000431889 DHX57Q6P158 1386 aaKnown RBP21.02■□□□□ 0.96
SMARCE1-205ENST00000431889 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.95
SMARCE1-205ENST00000431889 MARF1Q9Y4F3 1742 aaKnown RBP21.01■□□□□ 0.95
SMARCE1-205ENST00000431889 NRXN1Q9ULB1 1477 aa21.01■□□□□ 0.95
SMARCE1-205ENST00000431889 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
SMARCE1-205ENST00000431889 TRAK1Q9UPV9 953 aa21.01■□□□□ 0.95
SMARCE1-205ENST00000431889 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
SMARCE1-205ENST00000431889 CABLES1Q8TDN4 633 aa21■□□□□ 0.95
SMARCE1-205ENST00000431889 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
SMARCE1-205ENST00000431889 PMFBP1Q8TBY8 1022 aa20.99■□□□□ 0.95
SMARCE1-205ENST00000431889 DCAF11Q8TEB1 546 aa20.99■□□□□ 0.95
SMARCE1-205ENST00000431889 POGKQ9P215 609 aa20.99■□□□□ 0.95
SMARCE1-205ENST00000431889 EP400Q96L91 3159 aa20.98■□□□□ 0.95
SMARCE1-205ENST00000431889 LMOD2Q6P5Q4 547 aa20.98■□□□□ 0.95
SMARCE1-205ENST00000431889 KIF1AQ12756 1690 aa20.98■□□□□ 0.95
SMARCE1-205ENST00000431889 PHF8Q9UPP1 1060 aa20.97■□□□□ 0.95
SMARCE1-205ENST00000431889 SPATA31A3Q5VYP0 1347 aa20.97■□□□□ 0.95
SMARCE1-205ENST00000431889 BCL9LQ86UU0 1499 aa20.96■□□□□ 0.95
SMARCE1-205ENST00000431889 MINK1Q8N4C8 1332 aaPredicted RBP20.96■□□□□ 0.95
SMARCE1-205ENST00000431889 ATRNO75882 1429 aa20.96■□□□□ 0.95
SMARCE1-205ENST00000431889 USP32Q8NFA0 1604 aa20.95■□□□□ 0.94
SMARCE1-205ENST00000431889 HAP1P54257 671 aaPredicted RBP20.93■□□□□ 0.94
SMARCE1-205ENST00000431889 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
SMARCE1-205ENST00000431889 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
SMARCE1-205ENST00000431889 PSME1Q06323 249 aa20.93■□□□□ 0.94
SMARCE1-205ENST00000431889 TNS3Q68CZ2 1445 aa20.9■□□□□ 0.94
SMARCE1-205ENST00000431889 GJD4Q96KN9 370 aaPredicted RBP20.89■□□□□ 0.94
SMARCE1-205ENST00000431889 ACIN1Q9UKV3 1341 aaKnown RBP20.89■□□□□ 0.94
SMARCE1-205ENST00000431889 DLC1Q96QB1 1528 aa20.88■□□□□ 0.93
SMARCE1-205ENST00000431889 PRR36Q9H6K5 1346 aa20.88■□□□□ 0.93
SMARCE1-205ENST00000431889 ABCA3Q99758 1704 aa20.88■□□□□ 0.93
SMARCE1-205ENST00000431889 ATAD2Q6PL18 1390 aa20.88■□□□□ 0.93
SMARCE1-205ENST00000431889 SRCAPQ6ZRS2 3230 aa20.87■□□□□ 0.93
SMARCE1-205ENST00000431889 GLI3P10071 1580 aa20.87■□□□□ 0.93
SMARCE1-205ENST00000431889 UNC5CLQ8IV45 518 aa20.86■□□□□ 0.93
SMARCE1-205ENST00000431889 RALGAPBQ86X10 1494 aa20.85■□□□□ 0.93
SMARCE1-205ENST00000431889 SLIT2O94813 1529 aa20.85■□□□□ 0.93
SMARCE1-205ENST00000431889 PLCH1Q4KWH8 1693 aa20.85■□□□□ 0.93
SMARCE1-205ENST00000431889 BRWD3Q6RI45 1802 aa20.85■□□□□ 0.93
SMARCE1-205ENST00000431889 CCDC9Q9Y3X0 531 aaKnown RBP20.85■□□□□ 0.93
SMARCE1-205ENST00000431889 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.84■□□□□ 0.93
SMARCE1-205ENST00000431889 ADGRB2O60241 1585 aa20.84■□□□□ 0.93
SMARCE1-205ENST00000431889 ARHGEF28Q8N1W1 1705 aaKnown RBP20.83■□□□□ 0.92
SMARCE1-205ENST00000431889 TRPM3Q9HCF6 1732 aaPredicted RBP20.82■□□□□ 0.92
SMARCE1-205ENST00000431889 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
SMARCE1-205ENST00000431889 FAM83GA6ND36 823 aa20.81■□□□□ 0.92
SMARCE1-205ENST00000431889 WASLO00401 505 aaPredicted RBP20.81■□□□□ 0.92
SMARCE1-205ENST00000431889 PAK3O75914 559 aaPredicted RBP20.81■□□□□ 0.92
SMARCE1-205ENST00000431889 ANKARQ7Z5J8 1434 aa20.81■□□□□ 0.92
SMARCE1-205ENST00000431889 TULP4Q9NRJ4 1543 aa20.79■□□□□ 0.92
SMARCE1-205ENST00000431889 NGDNQ8NEJ9 315 aaKnown RBP20.79■□□□□ 0.92
SMARCE1-205ENST00000431889 ALS2Q96Q42 1657 aa20.78■□□□□ 0.92
SMARCE1-205ENST00000431889 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
SMARCE1-205ENST00000431889 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
SMARCE1-205ENST00000431889 A0A0G2JS52 829 aa20.76■□□□□ 0.91
SMARCE1-205ENST00000431889 MYT1Q01538 1121 aa20.76■□□□□ 0.91
SMARCE1-205ENST00000431889 NBPF1Q3BBV0 1214 aa20.76■□□□□ 0.91
SMARCE1-205ENST00000431889 NUTM2GQ5VZR2 741 aa20.76■□□□□ 0.91
SMARCE1-205ENST00000431889 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
SMARCE1-205ENST00000431889 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
SMARCE1-205ENST00000431889 HRCP23327 699 aa20.75■□□□□ 0.91
SMARCE1-205ENST00000431889 VPS72Q15906 364 aa20.75■□□□□ 0.91
SMARCE1-205ENST00000431889 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
SMARCE1-205ENST00000431889 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
SMARCE1-205ENST00000431889 CDK19Q9BWU1 502 aa20.74■□□□□ 0.91
SMARCE1-205ENST00000431889 DEFB132Q7Z7B7 95 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms