RNA–Protein interactions for RNA: ENST00000429812.5

PDLIM2-210, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-210ENST00000429812 RXRBP28702 533 aa26.47■■□□□ 1.83
PDLIM2-210ENST00000429812 SOS2Q07890 1332 aaPredicted RBP26.46■■□□□ 1.83
PDLIM2-210ENST00000429812 IFT172Q9UG01 1749 aa26.45■■□□□ 1.83
PDLIM2-210ENST00000429812 ESCO1Q5FWF5 840 aa26.45■■□□□ 1.82
PDLIM2-210ENST00000429812 XPCQ01831 940 aaPredicted RBP26.44■■□□□ 1.82
PDLIM2-210ENST00000429812 LRPPRCP42704 1394 aaKnown RBP26.44■■□□□ 1.82
PDLIM2-210ENST00000429812 PIK3C2GO75747 1445 aa26.43■■□□□ 1.82
PDLIM2-210ENST00000429812 RAB3GAP2Q9H2M9 1393 aa26.42■■□□□ 1.82
PDLIM2-210ENST00000429812 LAMC1P11047 1609 aa26.41■■□□□ 1.82
PDLIM2-210ENST00000429812 NGLY1Q96IV0 654 aa26.4■■□□□ 1.82
PDLIM2-210ENST00000429812 QTRT2Q9H974 415 aaKnown RBP26.4■■□□□ 1.82
PDLIM2-210ENST00000429812 CDC42BPGQ6DT37 1551 aa26.4■■□□□ 1.82
PDLIM2-210ENST00000429812 TECPR2O15040 1411 aa26.39■■□□□ 1.82
PDLIM2-210ENST00000429812 ABCC11Q96J66 1382 aa26.39■■□□□ 1.82
PDLIM2-210ENST00000429812 FOXO3O43524 673 aa26.39■■□□□ 1.82
PDLIM2-210ENST00000429812 CFAP70Q5T0N1 1121 aa26.38■■□□□ 1.81
PDLIM2-210ENST00000429812 YTHDC2Q9H6S0 1430 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-210ENST00000429812 UPF1Q92900 1129 aaKnown RBP eCLIP26.37■■□□□ 1.81
PDLIM2-210ENST00000429812 C14orf93Q9H972 538 aaKnown RBP26.35■■□□□ 1.81
PDLIM2-210ENST00000429812 NPHP3Q7Z494 1330 aa26.35■■□□□ 1.81
PDLIM2-210ENST00000429812 SAFB2Q14151 953 aaKnown RBP eCLIP26.33■■□□□ 1.81
PDLIM2-210ENST00000429812 PXDNQ92626 1479 aa26.33■■□□□ 1.81
PDLIM2-210ENST00000429812 RGS12O14924 1447 aa26.31■■□□□ 1.8
PDLIM2-210ENST00000429812 KNDC1Q76NI1 1749 aa26.31■■□□□ 1.8
PDLIM2-210ENST00000429812 RBM6P78332 1123 aaKnown RBP26.31■■□□□ 1.8
PDLIM2-210ENST00000429812 USP21Q9UK80 565 aa26.3■■□□□ 1.8
PDLIM2-210ENST00000429812 CDK12Q9NYV4 1490 aaPredicted RBP26.3■■□□□ 1.8
PDLIM2-210ENST00000429812 NRXN1Q9ULB1 1477 aa26.3■■□□□ 1.8
PDLIM2-210ENST00000429812 PRAM1Q96QH2 718 aa26.27■■□□□ 1.8
PDLIM2-210ENST00000429812 DHX57Q6P158 1386 aaKnown RBP26.27■■□□□ 1.8
PDLIM2-210ENST00000429812 MYOM2P54296 1465 aa26.27■■□□□ 1.8
PDLIM2-210ENST00000429812 FMN2Q9NZ56 1722 aa26.26■■□□□ 1.79
PDLIM2-210ENST00000429812 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.79
PDLIM2-210ENST00000429812 KDM2AQ9Y2K7 1162 aa26.26■■□□□ 1.79
PDLIM2-210ENST00000429812 COL22A1Q8NFW1 1626 aaPredicted RBP26.25■■□□□ 1.79
PDLIM2-210ENST00000429812 PLEKHG5O94827 1062 aa26.24■■□□□ 1.79
PDLIM2-210ENST00000429812 FNBP4Q8N3X1 1017 aaPredicted RBP26.23■■□□□ 1.79
PDLIM2-210ENST00000429812 SIRT1Q96EB6 747 aa26.23■■□□□ 1.79
PDLIM2-210ENST00000429812 KRT28Q7Z3Y7 464 aa26.21■■□□□ 1.79
PDLIM2-210ENST00000429812 TRPC5Q9UL62 973 aaPredicted RBP26.21■■□□□ 1.79
PDLIM2-210ENST00000429812 DCAF11Q8TEB1 546 aa26.2■■□□□ 1.78
PDLIM2-210ENST00000429812 POGKQ9P215 609 aa26.2■■□□□ 1.78
PDLIM2-210ENST00000429812 TRAK1Q9UPV9 953 aa26.2■■□□□ 1.78
PDLIM2-210ENST00000429812 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
PDLIM2-210ENST00000429812 PHF8Q9UPP1 1060 aa26.19■■□□□ 1.78
PDLIM2-210ENST00000429812 RGPD8O14715 1765 aaPredicted RBP26.19■■□□□ 1.78
PDLIM2-210ENST00000429812 HIRIP3Q9BW71 556 aaPredicted RBP26.18■■□□□ 1.78
PDLIM2-210ENST00000429812 ATRNO75882 1429 aa26.17■■□□□ 1.78
PDLIM2-210ENST00000429812 BCL9LQ86UU0 1499 aa26.17■■□□□ 1.78
PDLIM2-210ENST00000429812 ADGRB1O14514 1584 aa26.16■■□□□ 1.78
PDLIM2-210ENST00000429812 PMFBP1Q8TBY8 1022 aa26.15■■□□□ 1.78
PDLIM2-210ENST00000429812 CABLES1Q8TDN4 633 aa26.15■■□□□ 1.78
PDLIM2-210ENST00000429812 KIF1AQ12756 1690 aa26.15■■□□□ 1.78
PDLIM2-210ENST00000429812 MINK1Q8N4C8 1332 aaPredicted RBP26.14■■□□□ 1.77
PDLIM2-210ENST00000429812 LMOD2Q6P5Q4 547 aa26.13■■□□□ 1.77
PDLIM2-210ENST00000429812 DLC1Q96QB1 1528 aa26.11■■□□□ 1.77
PDLIM2-210ENST00000429812 MARF1Q9Y4F3 1742 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-210ENST00000429812 TNS3Q68CZ2 1445 aa26.09■■□□□ 1.77
PDLIM2-210ENST00000429812 HAP1P54257 671 aaPredicted RBP26.09■■□□□ 1.77
PDLIM2-210ENST00000429812 PSME1Q06323 249 aa26.09■■□□□ 1.77
PDLIM2-210ENST00000429812 USP32Q8NFA0 1604 aa26.09■■□□□ 1.77
PDLIM2-210ENST00000429812 GJD4Q96KN9 370 aaPredicted RBP26.07■■□□□ 1.76
PDLIM2-210ENST00000429812 PRR36Q9H6K5 1346 aa26.07■■□□□ 1.76
PDLIM2-210ENST00000429812 ATAD2Q6PL18 1390 aa26.06■■□□□ 1.76
PDLIM2-210ENST00000429812 HRCP23327 699 aa26.05■■□□□ 1.76
PDLIM2-210ENST00000429812 UNC5CLQ8IV45 518 aa26.05■■□□□ 1.76
PDLIM2-210ENST00000429812 SLIT2O94813 1529 aa26.04■■□□□ 1.76
PDLIM2-210ENST00000429812 SBNO1A3KN83 1393 aa26.03■■□□□ 1.76
PDLIM2-210ENST00000429812 ANKARQ7Z5J8 1434 aa26.03■■□□□ 1.76
PDLIM2-210ENST00000429812 ADGRB2O60241 1585 aa26.03■■□□□ 1.76
PDLIM2-210ENST00000429812 WASLO00401 505 aaPredicted RBP26.01■■□□□ 1.75
PDLIM2-210ENST00000429812 RALGAPBQ86X10 1494 aa26.01■■□□□ 1.75
PDLIM2-210ENST00000429812 GLI3P10071 1580 aa25.99■■□□□ 1.75
PDLIM2-210ENST00000429812 ARHGEF10O15013 1369 aa25.97■■□□□ 1.75
PDLIM2-210ENST00000429812 TULP4Q9NRJ4 1543 aa25.97■■□□□ 1.75
PDLIM2-210ENST00000429812 FAM83GA6ND36 823 aa25.96■■□□□ 1.75
PDLIM2-210ENST00000429812 CCDC9Q9Y3X0 531 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-210ENST00000429812 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-210ENST00000429812 ABCA3Q99758 1704 aa25.95■■□□□ 1.74
PDLIM2-210ENST00000429812 EP400Q96L91 3159 aa25.95■■□□□ 1.74
PDLIM2-210ENST00000429812 NGDNQ8NEJ9 315 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-210ENST00000429812 STAC3Q96MF2 364 aa25.94■■□□□ 1.74
PDLIM2-210ENST00000429812 TRPM3Q9HCF6 1732 aaPredicted RBP25.94■■□□□ 1.74
PDLIM2-210ENST00000429812 GPRASP1Q5JY77 1395 aa25.94■■□□□ 1.74
PDLIM2-210ENST00000429812 PAK3O75914 559 aaPredicted RBP25.93■■□□□ 1.74
PDLIM2-210ENST00000429812 ARHGEF28Q8N1W1 1705 aaKnown RBP25.93■■□□□ 1.74
PDLIM2-210ENST00000429812 VPS72Q15906 364 aa25.92■■□□□ 1.74
PDLIM2-210ENST00000429812 NBPF1Q3BBV0 1214 aa25.92■■□□□ 1.74
PDLIM2-210ENST00000429812 PLCH1Q4KWH8 1693 aa25.92■■□□□ 1.74
PDLIM2-210ENST00000429812 EIF3AQ14152 1382 aaKnown RBP25.92■■□□□ 1.74
PDLIM2-210ENST00000429812 SEPT12Q8IYM1 358 aa25.91■■□□□ 1.74
PDLIM2-210ENST00000429812 NUDT16Q96DE0 195 aaKnown RBP25.91■■□□□ 1.74
PDLIM2-210ENST00000429812 CDK19Q9BWU1 502 aa25.89■■□□□ 1.74
PDLIM2-210ENST00000429812 ALS2Q96Q42 1657 aa25.88■■□□□ 1.73
PDLIM2-210ENST00000429812 ATP7BP35670 1465 aa25.88■■□□□ 1.73
PDLIM2-210ENST00000429812 BTG4Q9NY30 223 aa25.87■■□□□ 1.73
PDLIM2-210ENST00000429812 BRWD3Q6RI45 1802 aa25.86■■□□□ 1.73
PDLIM2-210ENST00000429812 NUTM2GQ5VZR2 741 aa25.85■■□□□ 1.73
PDLIM2-210ENST00000429812 NWD2Q9ULI1 1742 aa25.84■■□□□ 1.73
PDLIM2-210ENST00000429812 A0A0G2JS52 829 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms