RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
NUP98-207ENST00000429801 NRXN3Q9Y4C0 1643 aa11.89□□□□□ -0.51
NUP98-207ENST00000429801 TRAK1Q9UPV9 953 aa11.88□□□□□ -0.51
NUP98-207ENST00000429801 ASXL1Q8IXJ9 1541 aa11.88□□□□□ -0.51
NUP98-207ENST00000429801 ADAMTS13Q76LX8 1427 aa11.87□□□□□ -0.51
NUP98-207ENST00000429801 YTHDC2Q9H6S0 1430 aaKnown RBP11.87□□□□□ -0.51
NUP98-207ENST00000429801 SETD1AO15047 1707 aaKnown RBP11.87□□□□□ -0.51
NUP98-207ENST00000429801 TBX22Q9Y458 520 aa11.87□□□□□ -0.51
NUP98-207ENST00000429801 DIP2AQ14689 1571 aa11.86□□□□□ -0.51
NUP98-207ENST00000429801 MED14O60244 1454 aa11.86□□□□□ -0.51
NUP98-207ENST00000429801 TESK2Q96S53 571 aa11.86□□□□□ -0.51
NUP98-207ENST00000429801 STK26Q9P289 416 aa11.86□□□□□ -0.51
NUP98-207ENST00000429801 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
NUP98-207ENST00000429801 METP08581 1390 aa11.86□□□□□ -0.51
NUP98-207ENST00000429801 LRPPRCP42704 1394 aaKnown RBP11.86□□□□□ -0.51
NUP98-207ENST00000429801 TMF1P82094 1093 aa11.85□□□□□ -0.51
NUP98-207ENST00000429801 SLC26A8Q96RN1 970 aa11.85□□□□□ -0.51
NUP98-207ENST00000429801 WASHC2AQ641Q2 1341 aa11.85□□□□□ -0.51
NUP98-207ENST00000429801 ABCC11Q96J66 1382 aa11.85□□□□□ -0.51
NUP98-207ENST00000429801 CCDC7Q96M83 1385 aa11.84□□□□□ -0.51
NUP98-207ENST00000429801 C11orf95C9JLR9 678 aaPredicted RBP11.84□□□□□ -0.51
NUP98-207ENST00000429801 SBNO2Q9Y2G9 1366 aa11.84□□□□□ -0.51
NUP98-207ENST00000429801 KIF7Q2M1P5 1343 aa11.84□□□□□ -0.51
NUP98-207ENST00000429801 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.51
NUP98-207ENST00000429801 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
NUP98-207ENST00000429801 NPHP4O75161 1426 aaPredicted RBP11.83□□□□□ -0.52
NUP98-207ENST00000429801 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
NUP98-207ENST00000429801 CDCA8Q53HL2 280 aa11.83□□□□□ -0.52
NUP98-207ENST00000429801 LMTK3Q96Q04 1460 aa11.83□□□□□ -0.52
NUP98-207ENST00000429801 PIK3R4Q99570 1358 aa11.82□□□□□ -0.52
NUP98-207ENST00000429801 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
NUP98-207ENST00000429801 FANCIQ9NVI1 1328 aa11.82□□□□□ -0.52
NUP98-207ENST00000429801 NBR1Q14596 966 aa11.82□□□□□ -0.52
NUP98-207ENST00000429801 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
NUP98-207ENST00000429801 POGKQ9P215 609 aa11.82□□□□□ -0.52
NUP98-207ENST00000429801 TECPR2O15040 1411 aa11.82□□□□□ -0.52
NUP98-207ENST00000429801 DDX10Q13206 875 aaKnown RBP11.82□□□□□ -0.52
NUP98-207ENST00000429801 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
NUP98-207ENST00000429801 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
NUP98-207ENST00000429801 GLIPR1L2Q4G1C9 344 aa11.81□□□□□ -0.52
NUP98-207ENST00000429801 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
NUP98-207ENST00000429801 QRICH2Q9H0J4 1663 aa11.8□□□□□ -0.52
NUP98-207ENST00000429801 FAM135BQ49AJ0 1406 aa11.8□□□□□ -0.52
NUP98-207ENST00000429801 HSPA2P54652 639 aa11.8□□□□□ -0.52
NUP98-207ENST00000429801 POLR3GLQ9BT43 218 aa11.8□□□□□ -0.52
NUP98-207ENST00000429801 AMOTL2Q9Y2J4 779 aa11.8□□□□□ -0.52
NUP98-207ENST00000429801 CPS1P31327 1500 aa11.79□□□□□ -0.52
NUP98-207ENST00000429801 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
NUP98-207ENST00000429801 PTPRUQ92729 1446 aa11.78□□□□□ -0.52
NUP98-207ENST00000429801 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
NUP98-207ENST00000429801 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
NUP98-207ENST00000429801 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.53
NUP98-207ENST00000429801 PTCH1Q13635 1447 aa11.77□□□□□ -0.53
NUP98-207ENST00000429801 ROBO2Q9HCK4 1378 aa11.76□□□□□ -0.53
NUP98-207ENST00000429801 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
NUP98-207ENST00000429801 PUS7Q96PZ0 661 aaKnown RBP11.76□□□□□ -0.53
NUP98-207ENST00000429801 PLEKHH1Q9ULM0 1364 aa11.76□□□□□ -0.53
NUP98-207ENST00000429801 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
NUP98-207ENST00000429801 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
NUP98-207ENST00000429801 XRN1Q8IZH2 1706 aaKnown RBP11.75□□□□□ -0.53
NUP98-207ENST00000429801 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
NUP98-207ENST00000429801 CHD2O14647 1828 aaKnown RBP11.74□□□□□ -0.53
NUP98-207ENST00000429801 KCNA6P17658 529 aa11.74□□□□□ -0.53
NUP98-207ENST00000429801 DHX37Q8IY37 1157 aaKnown RBP11.74□□□□□ -0.53
NUP98-207ENST00000429801 TULP4Q9NRJ4 1543 aa11.73□□□□□ -0.53
NUP98-207ENST00000429801 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
NUP98-207ENST00000429801 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
NUP98-207ENST00000429801 CDK19Q9BWU1 502 aa11.71□□□□□ -0.53
NUP98-207ENST00000429801 DMRT2Q9Y5R5 561 aa11.71□□□□□ -0.53
NUP98-207ENST00000429801 NWD1Q149M9 1564 aa11.71□□□□□ -0.53
NUP98-207ENST00000429801 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.53
NUP98-207ENST00000429801 WASLO00401 505 aaPredicted RBP11.71□□□□□ -0.53
NUP98-207ENST00000429801 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
NUP98-207ENST00000429801 ADGRB2O60241 1585 aa11.7□□□□□ -0.54
NUP98-207ENST00000429801 NINLQ9Y2I6 1382 aa11.69□□□□□ -0.54
NUP98-207ENST00000429801 ANP32CO43423 234 aa11.69□□□□□ -0.54
NUP98-207ENST00000429801 PANK3Q9H999 370 aa11.69□□□□□ -0.54
NUP98-207ENST00000429801 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
NUP98-207ENST00000429801 NKTRP30414 1462 aaKnown RBP11.69□□□□□ -0.54
NUP98-207ENST00000429801 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
NUP98-207ENST00000429801 FKBP8Q14318 412 aa11.68□□□□□ -0.54
NUP98-207ENST00000429801 MYOM1P52179 1685 aa11.68□□□□□ -0.54
NUP98-207ENST00000429801 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
NUP98-207ENST00000429801 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
NUP98-207ENST00000429801 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
NUP98-207ENST00000429801 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
NUP98-207ENST00000429801 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
NUP98-207ENST00000429801 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
NUP98-207ENST00000429801 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
NUP98-207ENST00000429801 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
NUP98-207ENST00000429801 NCOA3Q9Y6Q9 1424 aa11.64□□□□□ -0.55
NUP98-207ENST00000429801 ANKRD36BQ8N2N9 1353 aa11.64□□□□□ -0.55
NUP98-207ENST00000429801 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
NUP98-207ENST00000429801 TERF2IPQ9NYB0 399 aa11.64□□□□□ -0.55
NUP98-207ENST00000429801 CABP1Q9NZU7 370 aa11.63□□□□□ -0.55
NUP98-207ENST00000429801 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
NUP98-207ENST00000429801 CDC42BPGQ6DT37 1551 aa11.63□□□□□ -0.55
NUP98-207ENST00000429801 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
NUP98-207ENST00000429801 HDGFL2Q7Z4V5 671 aaPredicted RBP11.63□□□□□ -0.55
NUP98-207ENST00000429801 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms