RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 IQGAP3Q86VI3 1631 aa18.75■□□□□ 0.59
MARK3-205ENST00000429436 U2SURPO15042 1029 aaKnown RBP18.74■□□□□ 0.59
MARK3-205ENST00000429436 ATP10AO60312 1499 aa18.74■□□□□ 0.59
MARK3-205ENST00000429436 TRMT2AQ8IZ69 625 aaKnown RBP18.74■□□□□ 0.59
MARK3-205ENST00000429436 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
MARK3-205ENST00000429436 PCDHB15Q9Y5E8 787 aa18.73■□□□□ 0.59
MARK3-205ENST00000429436 TSR2Q969E8 191 aaKnown RBP18.72■□□□□ 0.59
MARK3-205ENST00000429436 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
MARK3-205ENST00000429436 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
MARK3-205ENST00000429436 CFAP65Q6ZU64 1925 aaKnown RBP18.7■□□□□ 0.58
MARK3-205ENST00000429436 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
MARK3-205ENST00000429436 NSD3Q9BZ95 1437 aa18.7■□□□□ 0.58
MARK3-205ENST00000429436 RARSP54136 660 aaKnown RBP18.7■□□□□ 0.58
MARK3-205ENST00000429436 CABP2Q9NPB3 220 aa18.69■□□□□ 0.58
MARK3-205ENST00000429436 INSRP06213 1382 aa18.69■□□□□ 0.58
MARK3-205ENST00000429436 L1TD1Q5T7N2 865 aaKnown RBP18.69■□□□□ 0.58
MARK3-205ENST00000429436 FTSJ3Q8IY81 847 aaKnown RBP18.69■□□□□ 0.58
MARK3-205ENST00000429436 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
MARK3-205ENST00000429436 GOLGA6L3A6NEY3 463 aa18.68■□□□□ 0.58
MARK3-205ENST00000429436 PDZRN3Q9UPQ7 1066 aa18.68■□□□□ 0.58
MARK3-205ENST00000429436 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
MARK3-205ENST00000429436 PDE3AQ14432 1141 aa18.68■□□□□ 0.58
MARK3-205ENST00000429436 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
MARK3-205ENST00000429436 UPF2Q9HAU5 1272 aaKnown RBP18.67■□□□□ 0.58
MARK3-205ENST00000429436 CHD1O14646 1710 aa18.66■□□□□ 0.58
MARK3-205ENST00000429436 CFAP53Q96M91 514 aa18.66■□□□□ 0.58
MARK3-205ENST00000429436 BECN1Q14457 450 aa18.65■□□□□ 0.58
MARK3-205ENST00000429436 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
MARK3-205ENST00000429436 PLXNC1O60486 1568 aa18.65■□□□□ 0.58
MARK3-205ENST00000429436 CLTCL1P53675 1640 aa18.65■□□□□ 0.58
MARK3-205ENST00000429436 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
MARK3-205ENST00000429436 USP19O94966 1318 aa18.65■□□□□ 0.58
MARK3-205ENST00000429436 NOS1P29475 1434 aa18.64■□□□□ 0.58
MARK3-205ENST00000429436 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.58
MARK3-205ENST00000429436 MFAP1P55081 439 aaKnown RBP18.64■□□□□ 0.57
MARK3-205ENST00000429436 LAMC1P11047 1609 aa18.63■□□□□ 0.57
MARK3-205ENST00000429436 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
MARK3-205ENST00000429436 SMC4Q9NTJ3 1288 aa18.63■□□□□ 0.57
MARK3-205ENST00000429436 ITPRIPQ8IWB1 547 aa18.62■□□□□ 0.57
MARK3-205ENST00000429436 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
MARK3-205ENST00000429436 SYNMO15061 1565 aa18.62■□□□□ 0.57
MARK3-205ENST00000429436 VGLL3A8MV65 326 aa18.61■□□□□ 0.57
MARK3-205ENST00000429436 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
MARK3-205ENST00000429436 STAC3Q96MF2 364 aa18.61■□□□□ 0.57
MARK3-205ENST00000429436 ABCC1P33527 1531 aa18.6■□□□□ 0.57
MARK3-205ENST00000429436 FBLN1P23142 703 aa18.6■□□□□ 0.57
MARK3-205ENST00000429436 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
MARK3-205ENST00000429436 RWDD1Q9H446 243 aaPredicted RBP18.6■□□□□ 0.57
MARK3-205ENST00000429436 FANCAO15360 1455 aa18.59■□□□□ 0.57
MARK3-205ENST00000429436 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
MARK3-205ENST00000429436 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
MARK3-205ENST00000429436 TRPM2O94759 1503 aa18.59■□□□□ 0.57
MARK3-205ENST00000429436 CLCN1P35523 988 aa18.58■□□□□ 0.57
MARK3-205ENST00000429436 IQGAP1P46940 1657 aa18.58■□□□□ 0.56
MARK3-205ENST00000429436 PTPRTO14522 1441 aa18.58■□□□□ 0.56
MARK3-205ENST00000429436 NPC1L1Q9UHC9 1359 aa18.58■□□□□ 0.56
MARK3-205ENST00000429436 GTF2E1P29083 439 aaPredicted RBP18.58■□□□□ 0.56
MARK3-205ENST00000429436 TRIM44Q96DX7 344 aaPredicted RBP18.57■□□□□ 0.56
MARK3-205ENST00000429436 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
MARK3-205ENST00000429436 MYH16Q9H6N6 1097 aa18.57■□□□□ 0.56
MARK3-205ENST00000429436 BRD2P25440 801 aaKnown RBP18.56■□□□□ 0.56
MARK3-205ENST00000429436 DZIP1LQ8IYY4 767 aaKnown RBP18.56■□□□□ 0.56
MARK3-205ENST00000429436 MINK1Q8N4C8 1332 aaPredicted RBP18.56■□□□□ 0.56
MARK3-205ENST00000429436 ZCCHC11Q5TAX3 1644 aaKnown RBP18.56■□□□□ 0.56
MARK3-205ENST00000429436 ZKSCAN2Q63HK3 967 aa18.56■□□□□ 0.56
MARK3-205ENST00000429436 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
MARK3-205ENST00000429436 KDM5AP29375 1690 aaKnown RBP18.56■□□□□ 0.56
MARK3-205ENST00000429436 POLR3AO14802 1390 aaPredicted RBP18.56■□□□□ 0.56
MARK3-205ENST00000429436 ADGRL1O94910 1474 aa18.55■□□□□ 0.56
MARK3-205ENST00000429436 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
MARK3-205ENST00000429436 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
MARK3-205ENST00000429436 ERBB4Q15303 1308 aa18.54■□□□□ 0.56
MARK3-205ENST00000429436 ZFP91Q96JP5 570 aaPredicted RBP18.53■□□□□ 0.56
MARK3-205ENST00000429436 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
MARK3-205ENST00000429436 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
MARK3-205ENST00000429436 MYOM1P52179 1685 aa18.53■□□□□ 0.56
MARK3-205ENST00000429436 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
MARK3-205ENST00000429436 ESPNB1AK53 854 aa18.53■□□□□ 0.56
MARK3-205ENST00000429436 TULP1O00294 542 aaPredicted RBP18.53■□□□□ 0.56
MARK3-205ENST00000429436 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
MARK3-205ENST00000429436 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
MARK3-205ENST00000429436 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
MARK3-205ENST00000429436 RAPGEF3O95398 923 aa18.52■□□□□ 0.56
MARK3-205ENST00000429436 NPM1P06748 294 aaKnown RBP eCLIP18.52■□□□□ 0.56
MARK3-205ENST00000429436 NOB1Q9ULX3 412 aaKnown RBP18.52■□□□□ 0.56
MARK3-205ENST00000429436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.556e-6■□□□□ 8.8
MARK3-205ENST00000429436 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
MARK3-205ENST00000429436 FAM13BQ9NYF5 915 aa18.51■□□□□ 0.55
MARK3-205ENST00000429436 EVC2Q86UK5 1308 aa18.51■□□□□ 0.55
MARK3-205ENST00000429436 TRIM27P14373 513 aa18.51■□□□□ 0.55
MARK3-205ENST00000429436 RIPK4P57078 832 aa18.51■□□□□ 0.55
MARK3-205ENST00000429436 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
MARK3-205ENST00000429436 ATP7AQ04656 1500 aa18.51■□□□□ 0.55
MARK3-205ENST00000429436 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
MARK3-205ENST00000429436 IPO4Q8TEX9 1081 aaKnown RBP18.5■□□□□ 0.55
MARK3-205ENST00000429436 RTEL1-TNFRSF6BF6WH68 1400 aa18.5■□□□□ 0.55
MARK3-205ENST00000429436 TBC1D32Q96NH3 1257 aa18.5■□□□□ 0.55
MARK3-205ENST00000429436 C22orf23Q9BZE7 217 aa18.49■□□□□ 0.55
MARK3-205ENST00000429436 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
MARK3-205ENST00000429436 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms