RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 ARHGEF28Q8N1W1 1705 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-205ENST00000428174 XIRP1Q702N8 1843 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-205ENST00000428174 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-205ENST00000428174 USP47Q96K76 1375 aa18.15■□□□□ 0.5
CCHCR1-205ENST00000428174 ATF3P18847 181 aa18.14■□□□□ 0.49
CCHCR1-205ENST00000428174 CADPS2Q86UW7 1296 aa18.13■□□□□ 0.49
CCHCR1-205ENST00000428174 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-205ENST00000428174 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-205ENST00000428174 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
CCHCR1-205ENST00000428174 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
CCHCR1-205ENST00000428174 TOM1O60784 492 aa18.11■□□□□ 0.49
CCHCR1-205ENST00000428174 EIF4G2P78344 907 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCHCR1-205ENST00000428174 DCCP43146 1447 aa18.11■□□□□ 0.49
CCHCR1-205ENST00000428174 NALCNQ8IZF0 1738 aa18.11■□□□□ 0.49
CCHCR1-205ENST00000428174 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
CCHCR1-205ENST00000428174 HSPA5P11021 654 aaKnown RBP18.08■□□□□ 0.48
CCHCR1-205ENST00000428174 CDC42BPGQ6DT37 1551 aa18.07■□□□□ 0.48
CCHCR1-205ENST00000428174 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
CCHCR1-205ENST00000428174 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
CCHCR1-205ENST00000428174 ADGRB2O60241 1585 aa18.06■□□□□ 0.48
CCHCR1-205ENST00000428174 NUTM2FA1L443 756 aa18.06■□□□□ 0.48
CCHCR1-205ENST00000428174 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
CCHCR1-205ENST00000428174 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
CCHCR1-205ENST00000428174 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
CCHCR1-205ENST00000428174 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
CCHCR1-205ENST00000428174 TESK2Q96S53 571 aa18.05■□□□□ 0.48
CCHCR1-205ENST00000428174 MST1RQ04912 1400 aa18.04■□□□□ 0.48
CCHCR1-205ENST00000428174 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
CCHCR1-205ENST00000428174 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
CCHCR1-205ENST00000428174 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-205ENST00000428174 C1orf167Q5SNV9 1468 aa18.01■□□□□ 0.47
CCHCR1-205ENST00000428174 TMF1P82094 1093 aa18.01■□□□□ 0.47
CCHCR1-205ENST00000428174 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
CCHCR1-205ENST00000428174 TULP4Q9NRJ4 1543 aa18.01■□□□□ 0.47
CCHCR1-205ENST00000428174 FMN2Q9NZ56 1722 aa18.01■□□□□ 0.47
CCHCR1-205ENST00000428174 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
CCHCR1-205ENST00000428174 NUDT16Q96DE0 195 aaKnown RBP18■□□□□ 0.47
CCHCR1-205ENST00000428174 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
CCHCR1-205ENST00000428174 ESCO1Q5FWF5 840 aa17.99■□□□□ 0.47
CCHCR1-205ENST00000428174 FBXO41Q8TF61 875 aa17.99■□□□□ 0.47
CCHCR1-205ENST00000428174 ORAI2Q96SN7 254 aa17.99■□□□□ 0.47
CCHCR1-205ENST00000428174 BRINP3Q76B58 766 aa17.97■□□□□ 0.47
CCHCR1-205ENST00000428174 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
CCHCR1-205ENST00000428174 DISP3Q9P2K9 1392 aa17.96■□□□□ 0.47
CCHCR1-205ENST00000428174 CDCA8Q53HL2 280 aa17.96■□□□□ 0.47
CCHCR1-205ENST00000428174 PUS7Q96PZ0 661 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-205ENST00000428174 ATP7BP35670 1465 aa17.95■□□□□ 0.46
CCHCR1-205ENST00000428174 ATAD2Q6PL18 1390 aa17.95■□□□□ 0.46
CCHCR1-205ENST00000428174 PHF8Q9UPP1 1060 aa17.95■□□□□ 0.46
CCHCR1-205ENST00000428174 USP32Q8NFA0 1604 aa17.94■□□□□ 0.46
CCHCR1-205ENST00000428174 PMFBP1Q8TBY8 1022 aa17.93■□□□□ 0.46
CCHCR1-205ENST00000428174 ROBO1Q9Y6N7 1651 aa17.92■□□□□ 0.46
CCHCR1-205ENST00000428174 PLEKHG3A1L390 1219 aa17.91■□□□□ 0.46
CCHCR1-205ENST00000428174 NGDNQ8NEJ9 315 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-205ENST00000428174 POLR3GLQ9BT43 218 aa17.91■□□□□ 0.46
CCHCR1-205ENST00000428174 CABP1Q9NZU7 370 aa17.91■□□□□ 0.46
CCHCR1-205ENST00000428174 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-205ENST00000428174 PPIP5K1Q6PFW1 1433 aa17.9■□□□□ 0.46
CCHCR1-205ENST00000428174 FOXO3O43524 673 aa17.9■□□□□ 0.46
CCHCR1-205ENST00000428174 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
CCHCR1-205ENST00000428174 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-205ENST00000428174 DDX17Q92841 729 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-205ENST00000428174 NPHP3Q7Z494 1330 aa17.89■□□□□ 0.45
CCHCR1-205ENST00000428174 ACEP12821 1306 aa17.88■□□□□ 0.45
CCHCR1-205ENST00000428174 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
CCHCR1-205ENST00000428174 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
CCHCR1-205ENST00000428174 PSME1Q06323 249 aa17.87■□□□□ 0.45
CCHCR1-205ENST00000428174 SLC12A5Q9H2X9 1139 aa17.87■□□□□ 0.45
CCHCR1-205ENST00000428174 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
CCHCR1-205ENST00000428174 HSPA1LP34931 641 aa17.86■□□□□ 0.45
CCHCR1-205ENST00000428174 KRT28Q7Z3Y7 464 aa17.86■□□□□ 0.45
CCHCR1-205ENST00000428174 POLR3AO14802 1390 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-205ENST00000428174 XPCQ01831 940 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-205ENST00000428174 NINLQ9Y2I6 1382 aa17.85■□□□□ 0.45
CCHCR1-205ENST00000428174 AHDC1Q5TGY3 1603 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-205ENST00000428174 SOS2Q07890 1332 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-205ENST00000428174 KIF7Q2M1P5 1343 aa17.84■□□□□ 0.45
CCHCR1-205ENST00000428174 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-205ENST00000428174 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-205ENST00000428174 TERF2IPQ9NYB0 399 aa17.83■□□□□ 0.44
CCHCR1-205ENST00000428174 NHSL1Q5SYE7 1610 aa17.83■□□□□ 0.44
CCHCR1-205ENST00000428174 CCDC7Q96M83 1385 aa17.82■□□□□ 0.44
CCHCR1-205ENST00000428174 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
CCHCR1-205ENST00000428174 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
CCHCR1-205ENST00000428174 ILDR1Q86SU0 546 aaPredicted RBP17.8■□□□□ 0.44
CCHCR1-205ENST00000428174 LRRC59Q96AG4 307 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-205ENST00000428174 PXDNQ92626 1479 aa17.8■□□□□ 0.44
CCHCR1-205ENST00000428174 CPSF1Q10570 1443 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-205ENST00000428174 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
CCHCR1-205ENST00000428174 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-205ENST00000428174 ANKRD36BQ8N2N9 1353 aa17.79■□□□□ 0.44
CCHCR1-205ENST00000428174 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
CCHCR1-205ENST00000428174 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-205ENST00000428174 USP6P35125 1406 aa17.78■□□□□ 0.44
CCHCR1-205ENST00000428174 A0A1W2PP64 1363 aa17.78■□□□□ 0.44
CCHCR1-205ENST00000428174 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-205ENST00000428174 COL16A1Q07092 1604 aaPredicted RBP17.77■□□□□ 0.44
CCHCR1-205ENST00000428174 SPATA31A3Q5VYP0 1347 aa17.76■□□□□ 0.43
CCHCR1-205ENST00000428174 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
CCHCR1-205ENST00000428174 TTC21BQ7Z4L5 1316 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms