RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 SKAP1Q86WV1 359 aa10.24□□□□□ -0.77
LRCH3-204ENST00000428136 WWC1Q8IX03 1113 aa10.24□□□□□ -0.77
LRCH3-204ENST00000428136 NSD3Q9BZ95 1437 aa10.23□□□□□ -0.77
LRCH3-204ENST00000428136 CAMSAP1Q5T5Y3 1602 aa10.23□□□□□ -0.77
LRCH3-204ENST00000428136 DMRT2Q9Y5R5 561 aa10.23□□□□□ -0.77
LRCH3-204ENST00000428136 AAMPQ13685 434 aa10.22□□□□□ -0.77
LRCH3-204ENST00000428136 CCDC27Q2M243 656 aa10.22□□□□□ -0.77
LRCH3-204ENST00000428136 CGNL1Q0VF96 1302 aa10.22□□□□□ -0.77
LRCH3-204ENST00000428136 ARHGEF28Q8N1W1 1705 aaKnown RBP10.22□□□□□ -0.77
LRCH3-204ENST00000428136 SIGLEC1Q9BZZ2 1709 aa10.22□□□□□ -0.77
LRCH3-204ENST00000428136 BCAR3O75815 825 aa10.22□□□□□ -0.77
LRCH3-204ENST00000428136 GLI2P10070 1586 aa10.22□□□□□ -0.77
LRCH3-204ENST00000428136 NSD2O96028 1365 aa10.22□□□□□ -0.77
LRCH3-204ENST00000428136 NEXMIFQ5QGS0 1516 aa10.21□□□□□ -0.77
LRCH3-204ENST00000428136 ZFYVE9O95405 1425 aa10.21□□□□□ -0.77
LRCH3-204ENST00000428136 ARHGAP31Q2M1Z3 1444 aa10.21□□□□□ -0.77
LRCH3-204ENST00000428136 WDR63Q8IWG1 891 aa10.21□□□□□ -0.77
LRCH3-204ENST00000428136 RUNDC1Q96C34 613 aa10.21□□□□□ -0.78
LRCH3-204ENST00000428136 ZMYM3Q14202 1370 aa10.21□□□□□ -0.78
LRCH3-204ENST00000428136 CD109Q6YHK3 1445 aa10.21□□□□□ -0.78
LRCH3-204ENST00000428136 TULP4Q9NRJ4 1543 aa10.2□□□□□ -0.78
LRCH3-204ENST00000428136 ADGRB2O60241 1585 aa10.2□□□□□ -0.78
LRCH3-204ENST00000428136 NEO1Q92859 1461 aa10.19□□□□□ -0.78
LRCH3-204ENST00000428136 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
LRCH3-204ENST00000428136 ANKRD36BQ8N2N9 1353 aa10.19□□□□□ -0.78
LRCH3-204ENST00000428136 SLC12A5Q9H2X9 1139 aa10.19□□□□□ -0.78
LRCH3-204ENST00000428136 IGHDP01880 384 aa10.18□□□□□ -0.78
LRCH3-204ENST00000428136 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
LRCH3-204ENST00000428136 NEFMP07197 916 aa10.18□□□□□ -0.78
LRCH3-204ENST00000428136 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
LRCH3-204ENST00000428136 RARSP54136 660 aaKnown RBP10.17□□□□□ -0.78
LRCH3-204ENST00000428136 DIP2CQ9Y2E4 1556 aa10.17□□□□□ -0.78
LRCH3-204ENST00000428136 EVC2Q86UK5 1308 aa10.16□□□□□ -0.78
LRCH3-204ENST00000428136 MAPK8IP3Q9UPT6 1336 aa10.16□□□□□ -0.78
LRCH3-204ENST00000428136 TCP11L2Q8N4U5 519 aa10.16□□□□□ -0.78
LRCH3-204ENST00000428136 LAS1LQ9Y4W2 734 aaKnown RBP10.16□□□□□ -0.78
LRCH3-204ENST00000428136 MED14O60244 1454 aa10.16□□□□□ -0.78
LRCH3-204ENST00000428136 CLTCQ00610 1675 aaKnown RBP10.16□□□□□ -0.78
LRCH3-204ENST00000428136 VGFO15240 615 aaPredicted RBP10.16□□□□□ -0.78
LRCH3-204ENST00000428136 USP19O94966 1318 aa10.15□□□□□ -0.78
LRCH3-204ENST00000428136 ANKRD26Q9UPS8 1709 aa10.15□□□□□ -0.78
LRCH3-204ENST00000428136 MTHFSP49914 203 aa10.15□□□□□ -0.78
LRCH3-204ENST00000428136 COL3A1P02461 1466 aaPredicted RBP10.15□□□□□ -0.79
LRCH3-204ENST00000428136 TMEM132EQ6IEE7 984 aa10.14□□□□□ -0.79
LRCH3-204ENST00000428136 CFAP53Q96M91 514 aa10.14□□□□□ -0.79
LRCH3-204ENST00000428136 CFAP65Q6ZU64 1925 aaKnown RBP10.14□□□□□ -0.79
LRCH3-204ENST00000428136 ABCC11Q96J66 1382 aa10.14□□□□□ -0.79
LRCH3-204ENST00000428136 RICTORQ6R327 1708 aa10.14□□□□□ -0.79
LRCH3-204ENST00000428136 CT47B1P0C2W7 299 aaPredicted RBP10.14□□□□□ -0.79
LRCH3-204ENST00000428136 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
LRCH3-204ENST00000428136 NLRP1Q9C000 1473 aa10.14□□□□□ -0.79
LRCH3-204ENST00000428136 CHGAP10645 457 aaKnown RBP10.13□□□□□ -0.79
LRCH3-204ENST00000428136 GGT6Q6P531 493 aa10.13□□□□□ -0.79
LRCH3-204ENST00000428136 PMFBP1Q8TBY8 1022 aa10.13□□□□□ -0.79
LRCH3-204ENST00000428136 PANK1Q8TE04 598 aa10.13□□□□□ -0.79
LRCH3-204ENST00000428136 TMEM131LA2VDJ0 1609 aa10.13□□□□□ -0.79
LRCH3-204ENST00000428136 PTPRMP28827 1452 aa10.13□□□□□ -0.79
LRCH3-204ENST00000428136 RGS3P49796 1198 aa10.12□□□□□ -0.79
LRCH3-204ENST00000428136 NFKBIBQ15653 356 aa10.12□□□□□ -0.79
LRCH3-204ENST00000428136 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
LRCH3-204ENST00000428136 MYH16Q9H6N6 1097 aa10.12□□□□□ -0.79
LRCH3-204ENST00000428136 PLEKHF1Q96S99 279 aa10.12□□□□□ -0.79
LRCH3-204ENST00000428136 SLC52A1Q9NWF4 448 aa10.12□□□□□ -0.79
LRCH3-204ENST00000428136 CD163L1Q9NR16 1453 aa10.11□□□□□ -0.79
LRCH3-204ENST00000428136 PREX1Q8TCU6 1659 aa10.11□□□□□ -0.79
LRCH3-204ENST00000428136 RLBP1P12271 317 aa10.11□□□□□ -0.79
LRCH3-204ENST00000428136 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
LRCH3-204ENST00000428136 CDC42BPGQ6DT37 1551 aa10.1□□□□□ -0.79
LRCH3-204ENST00000428136 A0A1W2PP64 1363 aa10.1□□□□□ -0.79
LRCH3-204ENST00000428136 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
LRCH3-204ENST00000428136 IL16Q14005 1332 aa10.1□□□□□ -0.79
LRCH3-204ENST00000428136 PNPLA6Q8IY17 1366 aa10.1□□□□□ -0.79
LRCH3-204ENST00000428136 CANXP27824 592 aaKnown RBP10.09□□□□□ -0.79
LRCH3-204ENST00000428136 SLC4A3P48751 1232 aa10.09□□□□□ -0.79
LRCH3-204ENST00000428136 IDI1Q13907 227 aa10.09□□□□□ -0.79
LRCH3-204ENST00000428136 MYO5BQ9ULV0 1848 aa10.09□□□□□ -0.79
LRCH3-204ENST00000428136 ATAD2Q6PL18 1390 aa10.09□□□□□ -0.79
LRCH3-204ENST00000428136 TNNT2P45379 298 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-204ENST00000428136 DAXXQ9UER7 740 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-204ENST00000428136 GSE1Q14687 1217 aa10.09□□□□□ -0.79
LRCH3-204ENST00000428136 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
LRCH3-204ENST00000428136 MVPQ14764 893 aaKnown RBP10.08□□□□□ -0.8
LRCH3-204ENST00000428136 CABP2Q9NPB3 220 aa10.08□□□□□ -0.8
LRCH3-204ENST00000428136 FRAT1Q92837 279 aaPredicted RBP10.08□□□□□ -0.8
LRCH3-204ENST00000428136 SEC24BO95487 1268 aa10.07□□□□□ -0.8
LRCH3-204ENST00000428136 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
LRCH3-204ENST00000428136 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
LRCH3-204ENST00000428136 ARHGEF40Q8TER5 1519 aa10.07□□□□□ -0.8
LRCH3-204ENST00000428136 TRIM35Q9UPQ4 493 aa10.07□□□□□ -0.8
LRCH3-204ENST00000428136 TNNQ9UQP3 1299 aa10.07□□□□□ -0.8
LRCH3-204ENST00000428136 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
LRCH3-204ENST00000428136 RAPGEF3O95398 923 aa10.07□□□□□ -0.8
LRCH3-204ENST00000428136 U2AF1L5P0DN76 240 aaPredicted RBP10.07□□□□□ -0.8
LRCH3-204ENST00000428136 U2AF1Q01081 240 aaKnown RBP eCLIP10.07□□□□□ -0.8
LRCH3-204ENST00000428136 ZKSCAN2Q63HK3 967 aa10.07□□□□□ -0.8
LRCH3-204ENST00000428136 DLC1Q96QB1 1528 aa10.06□□□□□ -0.8
LRCH3-204ENST00000428136 KIF20BQ96Q89 1820 aa10.06□□□□□ -0.8
LRCH3-204ENST00000428136 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
LRCH3-204ENST00000428136 ALKQ9UM73 1620 aa10.06□□□□□ -0.8
LRCH3-204ENST00000428136 FYB1O15117 783 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms