RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 ZBED9Q6R2W3 1325 aa35.96■■■■□ 3.35
SH3GL3-202ENST00000427482 SLC12A5Q9H2X9 1139 aa35.94■■■■□ 3.34
SH3GL3-202ENST00000427482 PLEKHG1Q9ULL1 1385 aa35.94■■■■□ 3.34
SH3GL3-202ENST00000427482 MINK1Q8N4C8 1332 aaPredicted RBP35.92■■■■□ 3.34
SH3GL3-202ENST00000427482 PLPPR3Q6T4P5 718 aa35.92■■■■□ 3.34
SH3GL3-202ENST00000427482 ADAMTS13Q76LX8 1427 aa35.91■■■■□ 3.34
SH3GL3-202ENST00000427482 CABP2Q9NPB3 220 aa35.91■■■■□ 3.34
SH3GL3-202ENST00000427482 NINLQ9Y2I6 1382 aa35.91■■■■□ 3.34
SH3GL3-202ENST00000427482 TECPR2O15040 1411 aa35.91■■■■□ 3.34
SH3GL3-202ENST00000427482 NSD3Q9BZ95 1437 aa35.91■■■■□ 3.34
SH3GL3-202ENST00000427482 CPS1P31327 1500 aa35.9■■■■□ 3.34
SH3GL3-202ENST00000427482 LTKP29376 864 aa35.89■■■■□ 3.34
SH3GL3-202ENST00000427482 PPP2R1AP30153 589 aa35.89■■■■□ 3.34
SH3GL3-202ENST00000427482 ATAD2Q6PL18 1390 aa35.88■■■■□ 3.33
SH3GL3-202ENST00000427482 ANKRD36BQ8N2N9 1353 aa35.88■■■■□ 3.33
SH3GL3-202ENST00000427482 PLEKHH1Q9ULM0 1364 aa35.86■■■■□ 3.33
SH3GL3-202ENST00000427482 SRPK2P78362 688 aaKnown RBP35.85■■■■□ 3.33
SH3GL3-202ENST00000427482 CEP170BQ9Y4F5 1589 aaPredicted RBP35.85■■■■□ 3.33
SH3GL3-202ENST00000427482 TXNDC2Q86VQ3 553 aa35.85■■■■□ 3.33
SH3GL3-202ENST00000427482 FAM135BQ49AJ0 1406 aa35.84■■■■□ 3.33
SH3GL3-202ENST00000427482 MED14O60244 1454 aa35.84■■■■□ 3.33
SH3GL3-202ENST00000427482 BCANQ96GW7 911 aa35.84■■■■□ 3.33
SH3GL3-202ENST00000427482 EID1Q9Y6B2 187 aa35.83■■■■□ 3.33
SH3GL3-202ENST00000427482 WAPLQ7Z5K2 1190 aa35.83■■■■□ 3.33
SH3GL3-202ENST00000427482 SIRT1Q96EB6 747 aa35.82■■■■□ 3.32
SH3GL3-202ENST00000427482 THEMISQ8N1K5 641 aaPredicted RBP35.81■■■■□ 3.32
SH3GL3-202ENST00000427482 INSRP06213 1382 aa35.81■■■■□ 3.32
SH3GL3-202ENST00000427482 ZNF142P52746 1687 aaPredicted RBP35.79■■■■□ 3.32
SH3GL3-202ENST00000427482 CDK19Q9BWU1 502 aa35.78■■■■□ 3.32
SH3GL3-202ENST00000427482 DIP2AQ14689 1571 aa35.75■■■■□ 3.31
SH3GL3-202ENST00000427482 A0A1W2PP64 1363 aa35.74■■■■□ 3.31
SH3GL3-202ENST00000427482 CGNL1Q0VF96 1302 aa35.74■■■■□ 3.31
SH3GL3-202ENST00000427482 CD163L1Q9NR16 1453 aa35.73■■■■□ 3.31
SH3GL3-202ENST00000427482 BLMP54132 1417 aaPredicted RBP35.72■■■■□ 3.31
SH3GL3-202ENST00000427482 NSD2O96028 1365 aa35.71■■■■□ 3.31
SH3GL3-202ENST00000427482 SETD1BQ9UPS6 1966 aaKnown RBP35.7■■■■□ 3.31
SH3GL3-202ENST00000427482 ROBO2Q9HCK4 1378 aa35.68■■■■□ 3.3
SH3GL3-202ENST00000427482 TERF2IPQ9NYB0 399 aa35.67■■■■□ 3.3
SH3GL3-202ENST00000427482 ANKRD26Q9UPS8 1709 aa35.67■■■■□ 3.3
SH3GL3-202ENST00000427482 ADGRB2O60241 1585 aa35.66■■■■□ 3.3
SH3GL3-202ENST00000427482 PTPRUQ92729 1446 aa35.66■■■■□ 3.3
SH3GL3-202ENST00000427482 TBX22Q9Y458 520 aa35.66■■■■□ 3.3
SH3GL3-202ENST00000427482 MORC1Q86VD1 984 aa35.65■■■■□ 3.3
SH3GL3-202ENST00000427482 SLC26A8Q96RN1 970 aa35.65■■■■□ 3.3
SH3GL3-202ENST00000427482 WASLO00401 505 aaPredicted RBP35.64■■■■□ 3.3
SH3GL3-202ENST00000427482 ATP7BP35670 1465 aa35.64■■■■□ 3.3
SH3GL3-202ENST00000427482 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.64■■■■□ 3.3
SH3GL3-202ENST00000427482 KIF20BQ96Q89 1820 aa35.61■■■■□ 3.29
SH3GL3-202ENST00000427482 CABP1Q9NZU7 370 aa35.6■■■■□ 3.29
SH3GL3-202ENST00000427482 SUPT16HQ9Y5B9 1047 aaKnown RBP35.6■■■■□ 3.29
SH3GL3-202ENST00000427482 SMG6Q86US8 1419 aaKnown RBP35.59■■■■□ 3.29
SH3GL3-202ENST00000427482 XRN1Q8IZH2 1706 aaKnown RBP35.59■■■■□ 3.29
SH3GL3-202ENST00000427482 HDGFL2Q7Z4V5 671 aaPredicted RBP35.59■■■■□ 3.29
SH3GL3-202ENST00000427482 WDR43Q15061 677 aaKnown RBP eCLIP35.58■■■■□ 3.29
SH3GL3-202ENST00000427482 POLR3AO14802 1390 aaPredicted RBP35.58■■■■□ 3.29
SH3GL3-202ENST00000427482 ADAMTS8Q9UP79 889 aa35.57■■■■□ 3.29
SH3GL3-202ENST00000427482 PTCH1Q13635 1447 aa35.57■■■■□ 3.28
SH3GL3-202ENST00000427482 SENP3-EIF4A1A0A087X0R7 540 aa35.54■■■■□ 3.28
SH3GL3-202ENST00000427482 PPIP5K1Q6PFW1 1433 aa35.53■■■■□ 3.28
SH3GL3-202ENST00000427482 SHPRHQ149N8 1683 aa35.52■■■■□ 3.28
SH3GL3-202ENST00000427482 NEFLP07196 543 aa35.52■■■■□ 3.28
SH3GL3-202ENST00000427482 AMOTL2Q9Y2J4 779 aa35.52■■■■□ 3.28
SH3GL3-202ENST00000427482 CDC42BPGQ6DT37 1551 aa35.52■■■■□ 3.28
SH3GL3-202ENST00000427482 AKAP12Q02952 1782 aa35.51■■■■□ 3.28
SH3GL3-202ENST00000427482 ITSN1Q15811 1721 aa35.51■■■■□ 3.27
SH3GL3-202ENST00000427482 MON2Q7Z3U7 1717 aa35.5■■■■□ 3.27
SH3GL3-202ENST00000427482 TOPAZ1Q8N9V7 1692 aa35.5■■■■□ 3.27
SH3GL3-202ENST00000427482 CPSF1Q10570 1443 aaKnown RBP35.49■■■■□ 3.27
SH3GL3-202ENST00000427482 NUDT16Q96DE0 195 aaKnown RBP35.49■■■■□ 3.27
SH3GL3-202ENST00000427482 NUDCQ9Y266 331 aa35.49■■■■□ 3.27
SH3GL3-202ENST00000427482 PIK3R4Q99570 1358 aa35.49■■■■□ 3.27
SH3GL3-202ENST00000427482 TNNT2P45379 298 aaPredicted RBP35.48■■■■□ 3.27
SH3GL3-202ENST00000427482 FKBP8Q14318 412 aa35.48■■■■□ 3.27
SH3GL3-202ENST00000427482 FYB1O15117 783 aa35.46■■■■□ 3.27
SH3GL3-202ENST00000427482 ANKLE2Q86XL3 938 aa35.46■■■■□ 3.27
SH3GL3-202ENST00000427482 CCDC61Q9Y6R9 512 aa35.45■■■■□ 3.27
SH3GL3-202ENST00000427482 GGNBP2Q9H3C7 697 aa35.43■■■■□ 3.26
SH3GL3-202ENST00000427482 CHD2O14647 1828 aaKnown RBP35.43■■■■□ 3.26
SH3GL3-202ENST00000427482 PRR36Q9H6K5 1346 aa35.43■■■■□ 3.26
SH3GL3-202ENST00000427482 EDC4Q6P2E9 1401 aaKnown RBP35.42■■■■□ 3.26
SH3GL3-202ENST00000427482 MTHFSP49914 203 aa35.41■■■■□ 3.26
SH3GL3-202ENST00000427482 PDE3BQ13370 1112 aa35.41■■■■□ 3.26
SH3GL3-202ENST00000427482 SALL2Q9Y467 1007 aaPredicted RBP35.39■■■■□ 3.26
SH3GL3-202ENST00000427482 NCKAP5LQ9HCH0 1330 aa35.37■■■■□ 3.25
SH3GL3-202ENST00000427482 CFAP53Q96M91 514 aa35.36■■■■□ 3.25
SH3GL3-202ENST00000427482 NRKQ7Z2Y5 1582 aa35.32■■■■□ 3.24
SH3GL3-202ENST00000427482 KCNA6P17658 529 aa35.32■■■■□ 3.24
SH3GL3-202ENST00000427482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.32■■■■□ 3.24
SH3GL3-202ENST00000427482 ZNF692Q9BU19 519 aaPredicted RBP35.29■■■■□ 3.24
SH3GL3-202ENST00000427482 NPHP4O75161 1426 aaPredicted RBP35.29■■■■□ 3.24
SH3GL3-202ENST00000427482 NKTRP30414 1462 aaKnown RBP35.29■■■■□ 3.24
SH3GL3-202ENST00000427482 RGPD8O14715 1765 aaPredicted RBP35.28■■■■□ 3.24
SH3GL3-202ENST00000427482 CCDC146Q8IYE0 955 aa35.28■■■■□ 3.24
SH3GL3-202ENST00000427482 COL3A1P02461 1466 aaPredicted RBP35.28■■■■□ 3.24
SH3GL3-202ENST00000427482 PLEKHG3A1L390 1219 aa35.27■■■■□ 3.24
SH3GL3-202ENST00000427482 FMN2Q9NZ56 1722 aa35.26■■■■□ 3.23
SH3GL3-202ENST00000427482 MAP2P11137 1827 aaKnown RBP35.24■■■■□ 3.23
SH3GL3-202ENST00000427482 ZNF521Q96K83 1311 aa35.23■■■■□ 3.23
SH3GL3-202ENST00000427482 NALCNQ8IZF0 1738 aa35.23■■■■□ 3.23
SH3GL3-202ENST00000427482 CDCA7LQ96GN5 454 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms