RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 IFFO2Q5TF58 517 aa14.54□□□□□ -0.08
LSG1-202ENST00000427461 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
LSG1-202ENST00000427461 BAG6P46379 1132 aa14.53□□□□□ -0.08
LSG1-202ENST00000427461 XPCQ01831 940 aaPredicted RBP14.52□□□□□ -0.09
LSG1-202ENST00000427461 EN1Q05925 392 aaPredicted RBP14.52□□□□□ -0.09
LSG1-202ENST00000427461 E9PCH4 1651 aa14.52□□□□□ -0.09
LSG1-202ENST00000427461 SLIT2O94813 1529 aa14.51□□□□□ -0.09
LSG1-202ENST00000427461 KRT27Q7Z3Y8 459 aa14.5□□□□□ -0.09
LSG1-202ENST00000427461 PXDNQ92626 1479 aa14.48□□□□□ -0.09
LSG1-202ENST00000427461 FOXO3O43524 673 aa14.46□□□□□ -0.09
LSG1-202ENST00000427461 CCDC9Q9Y3X0 531 aaKnown RBP14.46□□□□□ -0.09
LSG1-202ENST00000427461 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.09
LSG1-202ENST00000427461 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
LSG1-202ENST00000427461 ONECUT3O60422 494 aaPredicted RBP14.45□□□□□ -0.1
LSG1-202ENST00000427461 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
LSG1-202ENST00000427461 FAM182BQ5T319 152 aa14.45□□□□□ -0.1
LSG1-202ENST00000427461 ROBO2Q9HCK4 1378 aa14.45□□□□□ -0.1
LSG1-202ENST00000427461 VPS72Q15906 364 aa14.44□□□□□ -0.1
LSG1-202ENST00000427461 IQGAP3Q86VI3 1631 aa14.44□□□□□ -0.1
LSG1-202ENST00000427461 SENP3-EIF4A1A0A087X0R7 540 aa14.43□□□□□ -0.1
LSG1-202ENST00000427461 A0A0G2JS52 829 aa14.43□□□□□ -0.1
LSG1-202ENST00000427461 MYT1Q01538 1121 aa14.43□□□□□ -0.1
LSG1-202ENST00000427461 EZH2Q15910 746 aaKnown RBP14.43□□□□□ -0.1
LSG1-202ENST00000427461 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
LSG1-202ENST00000427461 ADGRL2O95490 1459 aa14.43□□□□□ -0.1
LSG1-202ENST00000427461 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
LSG1-202ENST00000427461 USP32Q8NFA0 1604 aa14.42□□□□□ -0.1
LSG1-202ENST00000427461 RGPD1P0DJD0 1748 aa14.42□□□□□ -0.1
LSG1-202ENST00000427461 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
LSG1-202ENST00000427461 PLCH1Q4KWH8 1693 aa14.41□□□□□ -0.1
LSG1-202ENST00000427461 TNS1Q9HBL0 1735 aaKnown RBP14.4□□□□□ -0.1
LSG1-202ENST00000427461 CAMTA1Q9Y6Y1 1673 aa14.39□□□□□ -0.11
LSG1-202ENST00000427461 NUTM2FA1L443 756 aa14.39□□□□□ -0.11
LSG1-202ENST00000427461 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
LSG1-202ENST00000427461 CABLES1Q8TDN4 633 aa14.39□□□□□ -0.11
LSG1-202ENST00000427461 ZNF784Q8NCA9 323 aaPredicted RBP14.38□□□□□ -0.11
LSG1-202ENST00000427461 SPATA31A3Q5VYP0 1347 aa14.38□□□□□ -0.11
LSG1-202ENST00000427461 ADRA2BP18089 450 aa14.37□□□□□ -0.11
LSG1-202ENST00000427461 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
LSG1-202ENST00000427461 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
LSG1-202ENST00000427461 DISP2A7MBM2 1401 aa14.36□□□□□ -0.11
LSG1-202ENST00000427461 CAMKK2Q96RR4 588 aa14.36□□□□□ -0.11
LSG1-202ENST00000427461 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
LSG1-202ENST00000427461 HAP1P54257 671 aaPredicted RBP14.35□□□□□ -0.11
LSG1-202ENST00000427461 PPP1R1BQ9UD71 204 aaPredicted RBP14.35□□□□□ -0.11
LSG1-202ENST00000427461 CDC42BPGQ6DT37 1551 aa14.34□□□□□ -0.11
LSG1-202ENST00000427461 LRPPRCP42704 1394 aaKnown RBP14.34□□□□□ -0.11
LSG1-202ENST00000427461 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
LSG1-202ENST00000427461 FAM83GA6ND36 823 aa14.32□□□□□ -0.12
LSG1-202ENST00000427461 C1QTNF8P60827 252 aa14.32□□□□□ -0.12
LSG1-202ENST00000427461 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
LSG1-202ENST00000427461 TRIM37O94972 964 aa14.31□□□□□ -0.12
LSG1-202ENST00000427461 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
LSG1-202ENST00000427461 KRT28Q7Z3Y7 464 aa14.31□□□□□ -0.12
LSG1-202ENST00000427461 ABCA3Q99758 1704 aa14.31□□□□□ -0.12
LSG1-202ENST00000427461 UTRNP46939 3433 aa14.3□□□□□ -0.12
LSG1-202ENST00000427461 NUP155O75694 1391 aa14.3□□□□□ -0.12
LSG1-202ENST00000427461 NINLQ9Y2I6 1382 aa14.3□□□□□ -0.12
LSG1-202ENST00000427461 PRAG1Q86YV5 1406 aa14.3□□□□□ -0.12
LSG1-202ENST00000427461 NUP188Q5SRE5 1749 aa14.29□□□□□ -0.12
LSG1-202ENST00000427461 APBA3O96018 575 aa14.29□□□□□ -0.12
LSG1-202ENST00000427461 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
LSG1-202ENST00000427461 NAIPQ13075 1403 aa14.29□□□□□ -0.12
LSG1-202ENST00000427461 RREB1Q92766 1687 aa14.29□□□□□ -0.12
LSG1-202ENST00000427461 KCNQ2O43526 872 aa14.28□□□□□ -0.12
LSG1-202ENST00000427461 CLTCL1P53675 1640 aa14.28□□□□□ -0.12
LSG1-202ENST00000427461 ADGRB2O60241 1585 aa14.27□□□□□ -0.12
LSG1-202ENST00000427461 CCDC144AA2RUR9 1427 aa14.27□□□□□ -0.12
LSG1-202ENST00000427461 TNS3Q68CZ2 1445 aa14.27□□□□□ -0.12
LSG1-202ENST00000427461 LMOD2Q6P5Q4 547 aa14.27□□□□□ -0.13
LSG1-202ENST00000427461 BTG4Q9NY30 223 aa14.27□□□□□ -0.13
LSG1-202ENST00000427461 WAPLQ7Z5K2 1190 aa14.26□□□□□ -0.13
LSG1-202ENST00000427461 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
LSG1-202ENST00000427461 KIF1AQ12756 1690 aa14.25□□□□□ -0.13
LSG1-202ENST00000427461 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
LSG1-202ENST00000427461 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
LSG1-202ENST00000427461 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
LSG1-202ENST00000427461 CEP350Q5VT06 3117 aa14.24□□□□□ -0.13
LSG1-202ENST00000427461 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
LSG1-202ENST00000427461 PARD3Q8TEW0 1356 aa14.23□□□□□ -0.13
LSG1-202ENST00000427461 SPATA31A5Q5VU36 1347 aa14.23□□□□□ -0.13
LSG1-202ENST00000427461 SPATA31A7Q8IWB4 1347 aa14.23□□□□□ -0.13
LSG1-202ENST00000427461 KIF1BO60333 1816 aa14.23□□□□□ -0.13
LSG1-202ENST00000427461 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
LSG1-202ENST00000427461 FAM196AQ6ZSG2 479 aa14.22□□□□□ -0.13
LSG1-202ENST00000427461 STK26Q9P289 416 aa14.22□□□□□ -0.13
LSG1-202ENST00000427461 PLEKHH1Q9ULM0 1364 aa14.22□□□□□ -0.13
LSG1-202ENST00000427461 NRKQ7Z2Y5 1582 aa14.21□□□□□ -0.14
LSG1-202ENST00000427461 PSME1Q06323 249 aa14.2□□□□□ -0.14
LSG1-202ENST00000427461 APLP2Q06481 763 aa14.2□□□□□ -0.14
LSG1-202ENST00000427461 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
LSG1-202ENST00000427461 CHD4Q14839 1912 aa14.19□□□□□ -0.14
LSG1-202ENST00000427461 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
LSG1-202ENST00000427461 SBNO1A3KN83 1393 aa14.19□□□□□ -0.14
LSG1-202ENST00000427461 PDGFDQ9GZP0 370 aaPredicted RBP14.18□□□□□ -0.14
LSG1-202ENST00000427461 ARHGEF10O15013 1369 aa14.18□□□□□ -0.14
LSG1-202ENST00000427461 MYOM1P52179 1685 aa14.17□□□□□ -0.14
LSG1-202ENST00000427461 LOC105371045A0A1W2PR82 267 aa14.17□□□□□ -0.14
LSG1-202ENST00000427461 PPLO60437 1756 aa14.16□□□□□ -0.14
LSG1-202ENST00000427461 CASZ1Q86V15 1759 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms