RNA–Protein interactions for RNA: ENST00000427217.5

ARPC1B-205, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-205ENST00000427217 FMN2Q9NZ56 1722 aa28.75■■■□□ 2.19
ARPC1B-205ENST00000427217 NBPF1Q3BBV0 1214 aa28.74■■■□□ 2.19
ARPC1B-205ENST00000427217 NBPF8Q3BBV2 869 aa28.74■■■□□ 2.19
ARPC1B-205ENST00000427217 GPRASP1Q5JY77 1395 aa28.74■■■□□ 2.19
ARPC1B-205ENST00000427217 WAPLQ7Z5K2 1190 aa28.73■■■□□ 2.19
ARPC1B-205ENST00000427217 ATF3P18847 181 aa28.72■■■□□ 2.19
ARPC1B-205ENST00000427217 TRAK1Q9UPV9 953 aa28.72■■■□□ 2.19
ARPC1B-205ENST00000427217 ROCK2O75116 1388 aaKnown RBP28.72■■■□□ 2.19
ARPC1B-205ENST00000427217 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.19
ARPC1B-205ENST00000427217 MST1RQ04912 1400 aa28.7■■■□□ 2.19
ARPC1B-205ENST00000427217 PRAM1Q96QH2 718 aa28.7■■■□□ 2.18
ARPC1B-205ENST00000427217 PIP4K2BP78356 416 aa28.67■■■□□ 2.18
ARPC1B-205ENST00000427217 SLAIN2Q9P270 581 aa28.67■■■□□ 2.18
ARPC1B-205ENST00000427217 POGKQ9P215 609 aa28.66■■■□□ 2.18
ARPC1B-205ENST00000427217 RGPD8O14715 1765 aaPredicted RBP28.65■■■□□ 2.18
ARPC1B-205ENST00000427217 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.17
ARPC1B-205ENST00000427217 NHSL1Q5SYE7 1610 aa28.62■■■□□ 2.17
ARPC1B-205ENST00000427217 C1orf167Q5SNV9 1468 aa28.62■■■□□ 2.17
ARPC1B-205ENST00000427217 PHLPP1O60346 1717 aa28.6■■■□□ 2.17
ARPC1B-205ENST00000427217 AHDC1Q5TGY3 1603 aaPredicted RBP28.6■■■□□ 2.17
ARPC1B-205ENST00000427217 EIF3AQ14152 1382 aaKnown RBP28.6■■■□□ 2.17
ARPC1B-205ENST00000427217 USP32Q8NFA0 1604 aa28.59■■■□□ 2.17
ARPC1B-205ENST00000427217 KIF1AQ12756 1690 aa28.58■■■□□ 2.17
ARPC1B-205ENST00000427217 ITSN1Q15811 1721 aa28.58■■■□□ 2.17
ARPC1B-205ENST00000427217 SAFB2Q14151 953 aaKnown RBP eCLIP28.58■■■□□ 2.17
ARPC1B-205ENST00000427217 CENPJQ9HC77 1338 aaPredicted RBP28.56■■■□□ 2.16
ARPC1B-205ENST00000427217 TULP4Q9NRJ4 1543 aa28.55■■■□□ 2.16
ARPC1B-205ENST00000427217 CARD11Q9BXL7 1154 aa28.55■■■□□ 2.16
ARPC1B-205ENST00000427217 ANKARQ7Z5J8 1434 aa28.54■■■□□ 2.16
ARPC1B-205ENST00000427217 MINK1Q8N4C8 1332 aaPredicted RBP28.53■■■□□ 2.16
ARPC1B-205ENST00000427217 BRINP3Q76B58 766 aa28.53■■■□□ 2.16
ARPC1B-205ENST00000427217 COL16A1Q07092 1604 aaPredicted RBP28.53■■■□□ 2.16
ARPC1B-205ENST00000427217 TOPAZ1Q8N9V7 1692 aa28.51■■■□□ 2.16
ARPC1B-205ENST00000427217 SBNO2Q9Y2G9 1366 aa28.5■■■□□ 2.15
ARPC1B-205ENST00000427217 WASLO00401 505 aaPredicted RBP28.48■■■□□ 2.15
ARPC1B-205ENST00000427217 HSPA1LP34931 641 aa28.48■■■□□ 2.15
ARPC1B-205ENST00000427217 HIRIP3Q9BW71 556 aaPredicted RBP28.48■■■□□ 2.15
ARPC1B-205ENST00000427217 ATP7BP35670 1465 aa28.45■■■□□ 2.14
ARPC1B-205ENST00000427217 ORAI2Q96SN7 254 aa28.43■■■□□ 2.14
ARPC1B-205ENST00000427217 SHPRHQ149N8 1683 aa28.42■■■□□ 2.14
ARPC1B-205ENST00000427217 NUTM2FA1L443 756 aa28.4■■■□□ 2.14
ARPC1B-205ENST00000427217 ESCO1Q5FWF5 840 aa28.4■■■□□ 2.14
ARPC1B-205ENST00000427217 USP47Q96K76 1375 aa28.39■■■□□ 2.14
ARPC1B-205ENST00000427217 DISP3Q9P2K9 1392 aa28.39■■■□□ 2.14
ARPC1B-205ENST00000427217 PRR36Q9H6K5 1346 aa28.39■■■□□ 2.13
ARPC1B-205ENST00000427217 CDK19Q9BWU1 502 aa28.38■■■□□ 2.13
ARPC1B-205ENST00000427217 EVC2Q86UK5 1308 aa28.37■■■□□ 2.13
ARPC1B-205ENST00000427217 PXDNQ92626 1479 aa28.36■■■□□ 2.13
ARPC1B-205ENST00000427217 NPHP3Q7Z494 1330 aa28.35■■■□□ 2.13
ARPC1B-205ENST00000427217 PHF8Q9UPP1 1060 aa28.34■■■□□ 2.13
ARPC1B-205ENST00000427217 SOS2Q07890 1332 aaPredicted RBP28.33■■■□□ 2.13
ARPC1B-205ENST00000427217 TRPM3Q9HCF6 1732 aaPredicted RBP28.32■■■□□ 2.12
ARPC1B-205ENST00000427217 NUDT16Q96DE0 195 aaKnown RBP28.32■■■□□ 2.12
ARPC1B-205ENST00000427217 JCADQ9P266 1359 aa28.3■■■□□ 2.12
ARPC1B-205ENST00000427217 ST20-MTHFSA0A0A6YYL1 179 aa28.3■■■□□ 2.12
ARPC1B-205ENST00000427217 SLC24A1O60721 1099 aa28.3■■■□□ 2.12
ARPC1B-205ENST00000427217 SRPK2P78362 688 aaKnown RBP28.3■■■□□ 2.12
ARPC1B-205ENST00000427217 COL22A1Q8NFW1 1626 aaPredicted RBP28.29■■■□□ 2.12
ARPC1B-205ENST00000427217 DDX17Q92841 729 aaKnown RBP28.29■■■□□ 2.12
ARPC1B-205ENST00000427217 TESK2Q96S53 571 aa28.29■■■□□ 2.12
ARPC1B-205ENST00000427217 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
ARPC1B-205ENST00000427217 FOXO3O43524 673 aa28.28■■■□□ 2.12
ARPC1B-205ENST00000427217 CCDC61Q9Y6R9 512 aa28.28■■■□□ 2.12
ARPC1B-205ENST00000427217 ATAD2Q6PL18 1390 aa28.26■■■□□ 2.12
ARPC1B-205ENST00000427217 LRRC59Q96AG4 307 aaKnown RBP28.26■■■□□ 2.11
ARPC1B-205ENST00000427217 CABP2Q9NPB3 220 aa28.26■■■□□ 2.11
ARPC1B-205ENST00000427217 PPIP5K1Q6PFW1 1433 aa28.26■■■□□ 2.11
ARPC1B-205ENST00000427217 ALS2Q96Q42 1657 aa28.26■■■□□ 2.11
ARPC1B-205ENST00000427217 POLR3AO14802 1390 aaPredicted RBP28.25■■■□□ 2.11
ARPC1B-205ENST00000427217 PLEKHG3A1L390 1219 aa28.23■■■□□ 2.11
ARPC1B-205ENST00000427217 PMFBP1Q8TBY8 1022 aa28.23■■■□□ 2.11
ARPC1B-205ENST00000427217 PUS7Q96PZ0 661 aaKnown RBP28.23■■■□□ 2.11
ARPC1B-205ENST00000427217 MED1Q15648 1581 aaPredicted RBP28.23■■■□□ 2.11
ARPC1B-205ENST00000427217 SBNO1A3KN83 1393 aa28.21■■■□□ 2.11
ARPC1B-205ENST00000427217 PNPLA6Q8IY17 1366 aa28.21■■■□□ 2.11
ARPC1B-205ENST00000427217 MON2Q7Z3U7 1717 aa28.21■■■□□ 2.11
ARPC1B-205ENST00000427217 EIF4G2P78344 907 aaKnown RBP eCLIP28.19■■■□□ 2.17e-8■■■■■ 27.1
ARPC1B-205ENST00000427217 KRT28Q7Z3Y7 464 aa28.19■■■□□ 2.1
ARPC1B-205ENST00000427217 SPATA31A6Q5VVP1 1343 aa28.18■■■□□ 2.1
ARPC1B-205ENST00000427217 TNS3Q68CZ2 1445 aa28.18■■■□□ 2.1
ARPC1B-205ENST00000427217 PSME1Q06323 249 aa28.18■■■□□ 2.1
ARPC1B-205ENST00000427217 NGDNQ8NEJ9 315 aaKnown RBP28.18■■■□□ 2.1
ARPC1B-205ENST00000427217 ABCA3Q99758 1704 aa28.18■■■□□ 2.1
ARPC1B-205ENST00000427217 XPCQ01831 940 aaPredicted RBP28.17■■■□□ 2.1
ARPC1B-205ENST00000427217 ILDR2Q71H61 639 aa28.17■■■□□ 2.1
ARPC1B-205ENST00000427217 MARF1Q9Y4F3 1742 aaKnown RBP28.17■■■□□ 2.1
ARPC1B-205ENST00000427217 NRKQ7Z2Y5 1582 aa28.16■■■□□ 2.1
ARPC1B-205ENST00000427217 TMF1P82094 1093 aa28.16■■■□□ 2.1
ARPC1B-205ENST00000427217 ACEP12821 1306 aa28.16■■■□□ 2.1
ARPC1B-205ENST00000427217 SPATA31A3Q5VYP0 1347 aa28.16■■■□□ 2.1
ARPC1B-205ENST00000427217 CRYBG1Q9Y4K1 1723 aa28.15■■■□□ 2.1
ARPC1B-205ENST00000427217 MYOM1P52179 1685 aa28.14■■■□□ 2.1
ARPC1B-205ENST00000427217 BRD4O60885 1362 aaPredicted RBP28.13■■■□□ 2.09
ARPC1B-205ENST00000427217 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
ARPC1B-205ENST00000427217 CABP1Q9NZU7 370 aa28.12■■■□□ 2.09
ARPC1B-205ENST00000427217 ARHGEF10O15013 1369 aa28.11■■■□□ 2.09
ARPC1B-205ENST00000427217 HSPA5P11021 654 aaKnown RBP28.11■■■□□ 2.09
ARPC1B-205ENST00000427217 LRP6O75581 1613 aa28.1■■■□□ 2.09
ARPC1B-205ENST00000427217 USP6P35125 1406 aa28.1■■■□□ 2.09
ARPC1B-205ENST00000427217 CPSF1Q10570 1443 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms