RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 RALGAPBQ86X10 1494 aa30.84■■■□□ 2.53
RPUSD3-205ENST00000427174 GPRASP1Q5JY77 1395 aa30.84■■■□□ 2.53
RPUSD3-205ENST00000427174 CADPS2Q86UW7 1296 aa30.83■■■□□ 2.53
RPUSD3-205ENST00000427174 ROBO1Q9Y6N7 1651 aa30.83■■■□□ 2.53
RPUSD3-205ENST00000427174 PRAM1Q96QH2 718 aa30.82■■■□□ 2.52
RPUSD3-205ENST00000427174 ADGRB2O60241 1585 aa30.82■■■□□ 2.52
RPUSD3-205ENST00000427174 MST1RQ04912 1400 aa30.81■■■□□ 2.52
RPUSD3-205ENST00000427174 ATF3P18847 181 aa30.8■■■□□ 2.52
RPUSD3-205ENST00000427174 FMN2Q9NZ56 1722 aa30.8■■■□□ 2.52
RPUSD3-205ENST00000427174 PIP4K2BP78356 416 aa30.79■■■□□ 2.52
RPUSD3-205ENST00000427174 SLAIN2Q9P270 581 aa30.79■■■□□ 2.52
RPUSD3-205ENST00000427174 ROCK2O75116 1388 aaKnown RBP30.79■■■□□ 2.52
RPUSD3-205ENST00000427174 POGKQ9P215 609 aa30.74■■■□□ 2.51
RPUSD3-205ENST00000427174 QRICH2Q9H0J4 1663 aa30.73■■■□□ 2.51
RPUSD3-205ENST00000427174 SCAF1Q9H7N4 1312 aaKnown RBP30.73■■■□□ 2.51
RPUSD3-205ENST00000427174 RGPD8O14715 1765 aaPredicted RBP30.72■■■□□ 2.51
RPUSD3-205ENST00000427174 SAFB2Q14151 953 aaKnown RBP eCLIP30.72■■■□□ 2.51
RPUSD3-205ENST00000427174 C1orf167Q5SNV9 1468 aa30.71■■■□□ 2.51
RPUSD3-205ENST00000427174 USP32Q8NFA0 1604 aa30.67■■■□□ 2.5
RPUSD3-205ENST00000427174 NHSL1Q5SYE7 1610 aa30.66■■■□□ 2.5
RPUSD3-205ENST00000427174 AHDC1Q5TGY3 1603 aaPredicted RBP30.65■■■□□ 2.5
RPUSD3-205ENST00000427174 BRINP3Q76B58 766 aa30.64■■■□□ 2.5
RPUSD3-205ENST00000427174 MINK1Q8N4C8 1332 aaPredicted RBP30.64■■■□□ 2.5
RPUSD3-205ENST00000427174 CENPJQ9HC77 1338 aaPredicted RBP30.64■■■□□ 2.5
RPUSD3-205ENST00000427174 CARD11Q9BXL7 1154 aa30.63■■■□□ 2.49
RPUSD3-205ENST00000427174 PHLPP1O60346 1717 aa30.62■■■□□ 2.49
RPUSD3-205ENST00000427174 HSPA1LP34931 641 aa30.62■■■□□ 2.49
RPUSD3-205ENST00000427174 HIRIP3Q9BW71 556 aaPredicted RBP30.61■■■□□ 2.49
RPUSD3-205ENST00000427174 EIF3AQ14152 1382 aaKnown RBP30.6■■■□□ 2.49
RPUSD3-205ENST00000427174 COL16A1Q07092 1604 aaPredicted RBP30.59■■■□□ 2.49
RPUSD3-205ENST00000427174 TULP4Q9NRJ4 1543 aa30.59■■■□□ 2.49
RPUSD3-205ENST00000427174 ANKARQ7Z5J8 1434 aa30.58■■■□□ 2.49
RPUSD3-205ENST00000427174 WASLO00401 505 aaPredicted RBP30.58■■■□□ 2.49
RPUSD3-205ENST00000427174 ORAI2Q96SN7 254 aa30.57■■■□□ 2.48
RPUSD3-205ENST00000427174 KIF1AQ12756 1690 aa30.57■■■□□ 2.48
RPUSD3-205ENST00000427174 ITSN1Q15811 1721 aa30.55■■■□□ 2.48
RPUSD3-205ENST00000427174 NUTM2FA1L443 756 aa30.54■■■□□ 2.48
RPUSD3-205ENST00000427174 TOPAZ1Q8N9V7 1692 aa30.54■■■□□ 2.48
RPUSD3-205ENST00000427174 SBNO2Q9Y2G9 1366 aa30.54■■■□□ 2.48
RPUSD3-205ENST00000427174 PRR36Q9H6K5 1346 aa30.52■■■□□ 2.48
RPUSD3-205ENST00000427174 ATP7BP35670 1465 aa30.52■■■□□ 2.48
RPUSD3-205ENST00000427174 ESCO1Q5FWF5 840 aa30.49■■■□□ 2.47
RPUSD3-205ENST00000427174 CDK19Q9BWU1 502 aa30.49■■■□□ 2.47
RPUSD3-205ENST00000427174 USP47Q96K76 1375 aa30.45■■■□□ 2.47
RPUSD3-205ENST00000427174 DDX17Q92841 729 aaKnown RBP30.45■■■□□ 2.47
RPUSD3-205ENST00000427174 PXDNQ92626 1479 aa30.44■■■□□ 2.46
RPUSD3-205ENST00000427174 SHPRHQ149N8 1683 aa30.42■■■□□ 2.46
RPUSD3-205ENST00000427174 NUDT16Q96DE0 195 aaKnown RBP30.42■■■□□ 2.46
RPUSD3-205ENST00000427174 PHF8Q9UPP1 1060 aa30.42■■■□□ 2.46
RPUSD3-205ENST00000427174 SOS2Q07890 1332 aaPredicted RBP30.42■■■□□ 2.46
RPUSD3-205ENST00000427174 ST20-MTHFSA0A0A6YYL1 179 aa30.41■■■□□ 2.46
RPUSD3-205ENST00000427174 TESK2Q96S53 571 aa30.41■■■□□ 2.46
RPUSD3-205ENST00000427174 NPHP3Q7Z494 1330 aa30.4■■■□□ 2.46
RPUSD3-205ENST00000427174 EVC2Q86UK5 1308 aa30.4■■■□□ 2.46
RPUSD3-205ENST00000427174 FOXO3O43524 673 aa30.38■■■□□ 2.45
RPUSD3-205ENST00000427174 CABP2Q9NPB3 220 aa30.37■■■□□ 2.45
RPUSD3-205ENST00000427174 TRPM3Q9HCF6 1732 aaPredicted RBP30.36■■■□□ 2.45
RPUSD3-205ENST00000427174 SRPK2P78362 688 aaKnown RBP30.35■■■□□ 2.45
RPUSD3-205ENST00000427174 CCDC61Q9Y6R9 512 aa30.35■■■□□ 2.45
RPUSD3-205ENST00000427174 JCADQ9P266 1359 aa30.34■■■□□ 2.45
RPUSD3-205ENST00000427174 PMFBP1Q8TBY8 1022 aa30.34■■■□□ 2.45
RPUSD3-205ENST00000427174 PLEKHG3A1L390 1219 aa30.32■■■□□ 2.44
RPUSD3-205ENST00000427174 POLR3AO14802 1390 aaPredicted RBP30.31■■■□□ 2.44
RPUSD3-205ENST00000427174 LRRC59Q96AG4 307 aaKnown RBP30.31■■■□□ 2.44
RPUSD3-205ENST00000427174 PPIP5K1Q6PFW1 1433 aa30.3■■■□□ 2.44
RPUSD3-205ENST00000427174 COL22A1Q8NFW1 1626 aaPredicted RBP30.3■■■□□ 2.44
RPUSD3-205ENST00000427174 XPCQ01831 940 aaPredicted RBP30.29■■■□□ 2.44
RPUSD3-205ENST00000427174 AKAP12Q02952 1782 aa30.28■■■□□ 2.44
RPUSD3-205ENST00000427174 ALS2Q96Q42 1657 aa30.28■■■□□ 2.44
RPUSD3-205ENST00000427174 PNPLA6Q8IY17 1366 aa30.28■■■□□ 2.44
RPUSD3-205ENST00000427174 SLC24A1O60721 1099 aa30.27■■■□□ 2.44
RPUSD3-205ENST00000427174 KRT28Q7Z3Y7 464 aa30.27■■■□□ 2.44
RPUSD3-205ENST00000427174 PUS7Q96PZ0 661 aaKnown RBP30.27■■■□□ 2.44
RPUSD3-205ENST00000427174 ATAD2Q6PL18 1390 aa30.27■■■□□ 2.44
RPUSD3-205ENST00000427174 DISP3Q9P2K9 1392 aa30.26■■■□□ 2.43
RPUSD3-205ENST00000427174 MED1Q15648 1581 aaPredicted RBP30.25■■■□□ 2.43
RPUSD3-205ENST00000427174 SBNO1A3KN83 1393 aa30.25■■■□□ 2.43
RPUSD3-205ENST00000427174 ACEP12821 1306 aa30.24■■■□□ 2.43
RPUSD3-205ENST00000427174 SPATA31A3Q5VYP0 1347 aa30.23■■■□□ 2.43
RPUSD3-205ENST00000427174 EIF4G2P78344 907 aaKnown RBP eCLIP30.23■■■□□ 2.43
RPUSD3-205ENST00000427174 NGDNQ8NEJ9 315 aaKnown RBP30.23■■■□□ 2.43
RPUSD3-205ENST00000427174 PSME1Q06323 249 aa30.22■■■□□ 2.43
RPUSD3-205ENST00000427174 CABP1Q9NZU7 370 aa30.22■■■□□ 2.43
RPUSD3-205ENST00000427174 TNS3Q68CZ2 1445 aa30.22■■■□□ 2.43
RPUSD3-205ENST00000427174 HSPA5P11021 654 aaKnown RBP30.21■■■□□ 2.43
RPUSD3-205ENST00000427174 SPATA31A6Q5VVP1 1343 aa30.21■■■□□ 2.43
RPUSD3-205ENST00000427174 MON2Q7Z3U7 1717 aa30.19■■■□□ 2.42
RPUSD3-205ENST00000427174 LRP6O75581 1613 aa30.19■■■□□ 2.42
RPUSD3-205ENST00000427174 TMF1P82094 1093 aa30.19■■■□□ 2.42
RPUSD3-205ENST00000427174 CD163L1Q9NR16 1453 aa30.18■■■□□ 2.42
RPUSD3-205ENST00000427174 ABCA3Q99758 1704 aa30.17■■■□□ 2.42
RPUSD3-205ENST00000427174 CPSF1Q10570 1443 aaKnown RBP30.17■■■□□ 2.42
RPUSD3-205ENST00000427174 CRYBG1Q9Y4K1 1723 aa30.16■■■□□ 2.42
RPUSD3-205ENST00000427174 NRKQ7Z2Y5 1582 aa30.16■■■□□ 2.42
RPUSD3-205ENST00000427174 MYOM1P52179 1685 aa30.16■■■□□ 2.42
RPUSD3-205ENST00000427174 USP6P35125 1406 aa30.14■■■□□ 2.42
RPUSD3-205ENST00000427174 SSH2Q76I76 1423 aa30.13■■■□□ 2.41
RPUSD3-205ENST00000427174 MARF1Q9Y4F3 1742 aaKnown RBP30.13■■■□□ 2.41
RPUSD3-205ENST00000427174 BRD4O60885 1362 aaPredicted RBP30.13■■■□□ 2.41
RPUSD3-205ENST00000427174 ARHGEF10O15013 1369 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms