RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 GJA5P36382 358 aa12.69□□□□□ -0.38
LINC01953-201ENST00000426870 FAM160A2Q8N612 972 aaPredicted RBP12.69□□□□□ -0.38
LINC01953-201ENST00000426870 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
LINC01953-201ENST00000426870 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
LINC01953-201ENST00000426870 RETREG3Q86VR2 466 aa12.68□□□□□ -0.38
LINC01953-201ENST00000426870 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
LINC01953-201ENST00000426870 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
LINC01953-201ENST00000426870 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
LINC01953-201ENST00000426870 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
LINC01953-201ENST00000426870 RIC3Q7Z5B4 369 aa12.66□□□□□ -0.38
LINC01953-201ENST00000426870 SLC19A1P41440 591 aa12.65□□□□□ -0.38
LINC01953-201ENST00000426870 SPTLC1O15269 473 aa12.64□□□□□ -0.39
LINC01953-201ENST00000426870 MTMR2Q13614 643 aa12.64□□□□□ -0.39
LINC01953-201ENST00000426870 SYMPKQ92797 1274 aaKnown RBP12.64□□□□□ -0.39
LINC01953-201ENST00000426870 PRDM9Q9NQV7 894 aa12.64□□□□□ -0.39
LINC01953-201ENST00000426870 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
LINC01953-201ENST00000426870 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
LINC01953-201ENST00000426870 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
LINC01953-201ENST00000426870 MYSM1Q5VVJ2 828 aa12.63□□□□□ -0.39
LINC01953-201ENST00000426870 ZBTB24O43167 697 aaPredicted RBP12.62□□□□□ -0.39
LINC01953-201ENST00000426870 MMP16P51512 607 aa12.62□□□□□ -0.39
LINC01953-201ENST00000426870 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
LINC01953-201ENST00000426870 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
LINC01953-201ENST00000426870 DXOO77932 396 aaKnown RBP12.6□□□□□ -0.39
LINC01953-201ENST00000426870 JUNDP17535 347 aa12.6□□□□□ -0.39
LINC01953-201ENST00000426870 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
LINC01953-201ENST00000426870 CLK2P49760 499 aaKnown RBP12.59□□□□□ -0.39
LINC01953-201ENST00000426870 PRPF38BQ5VTL8 546 aaKnown RBP12.59□□□□□ -0.39
LINC01953-201ENST00000426870 FAM117AQ9C073 453 aa12.59□□□□□ -0.39
LINC01953-201ENST00000426870 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
LINC01953-201ENST00000426870 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
LINC01953-201ENST00000426870 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
LINC01953-201ENST00000426870 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
LINC01953-201ENST00000426870 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
LINC01953-201ENST00000426870 RPIAP49247 311 aa12.57□□□□□ -0.4
LINC01953-201ENST00000426870 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
LINC01953-201ENST00000426870 PRR7Q8TB68 274 aa12.57□□□□□ -0.4
LINC01953-201ENST00000426870 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
LINC01953-201ENST00000426870 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
LINC01953-201ENST00000426870 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
LINC01953-201ENST00000426870 SPRYD7Q5W111 196 aa12.55□□□□□ -0.4
LINC01953-201ENST00000426870 HRCP23327 699 aa12.54□□□□□ -0.4
LINC01953-201ENST00000426870 SKIV2LQ15477 1246 aaKnown RBP12.54□□□□□ -0.4
LINC01953-201ENST00000426870 PLA2G2CQ5R387 149 aa12.54□□□□□ -0.4
LINC01953-201ENST00000426870 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
LINC01953-201ENST00000426870 ZNF598Q86UK7 904 aaKnown RBP12.54□□□□□ -0.4
LINC01953-201ENST00000426870 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
LINC01953-201ENST00000426870 LAPTM4AQ15012 233 aa12.53□□□□□ -0.4
LINC01953-201ENST00000426870 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
LINC01953-201ENST00000426870 NUDT12Q9BQG2 462 aa12.53□□□□□ -0.4
LINC01953-201ENST00000426870 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
LINC01953-201ENST00000426870 ZNF697Q5TEC3 545 aa12.52□□□□□ -0.41
LINC01953-201ENST00000426870 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
LINC01953-201ENST00000426870 CABLES1Q8TDN4 633 aa12.51□□□□□ -0.41
LINC01953-201ENST00000426870 TSC1Q92574 1164 aa12.51□□□□□ -0.41
LINC01953-201ENST00000426870 CCNYL3P0C7X3 344 aa12.5□□□□□ -0.41
LINC01953-201ENST00000426870 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
LINC01953-201ENST00000426870 PTPRNQ16849 979 aa12.5□□□□□ -0.41
LINC01953-201ENST00000426870 GFRA3O60609 400 aa12.49□□□□□ -0.41
LINC01953-201ENST00000426870 HELBQ8NG08 1087 aaPredicted RBP12.49□□□□□ -0.41
LINC01953-201ENST00000426870 PLEKHG3A1L390 1219 aa12.48□□□□□ -0.41
LINC01953-201ENST00000426870 LILRB3O75022 631 aa12.48□□□□□ -0.41
LINC01953-201ENST00000426870 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
LINC01953-201ENST00000426870 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
LINC01953-201ENST00000426870 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
LINC01953-201ENST00000426870 QPCTQ16769 361 aa12.47□□□□□ -0.41
LINC01953-201ENST00000426870 CFAP99D6REC4 459 aa12.46□□□□□ -0.41
LINC01953-201ENST00000426870 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.41
LINC01953-201ENST00000426870 TRIM32Q13049 653 aa12.45□□□□□ -0.42
LINC01953-201ENST00000426870 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
LINC01953-201ENST00000426870 CTHP32929 405 aa12.43□□□□□ -0.42
LINC01953-201ENST00000426870 LYPD8Q6UX82 237 aa12.43□□□□□ -0.42
LINC01953-201ENST00000426870 GOPCQ9HD26 462 aa12.43□□□□□ -0.42
LINC01953-201ENST00000426870 EVA1BQ9NVM1 165 aa12.43□□□□□ -0.42
LINC01953-201ENST00000426870 FOXC1Q12948 553 aa12.42□□□□□ -0.42
LINC01953-201ENST00000426870 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
LINC01953-201ENST00000426870 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
LINC01953-201ENST00000426870 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
LINC01953-201ENST00000426870 PRR20EP86478 221 aa12.4□□□□□ -0.42
LINC01953-201ENST00000426870 PRR20CP86479 221 aa12.4□□□□□ -0.42
LINC01953-201ENST00000426870 PRR20DP86480 221 aa12.4□□□□□ -0.42
LINC01953-201ENST00000426870 PRR20BP86481 221 aa12.4□□□□□ -0.42
LINC01953-201ENST00000426870 PRR20AP86496 221 aa12.4□□□□□ -0.42
LINC01953-201ENST00000426870 Q6ZNB5 142 aa12.39□□□□□ -0.43
LINC01953-201ENST00000426870 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01953-201ENST00000426870 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
LINC01953-201ENST00000426870 WNT7BP56706 349 aa12.38□□□□□ -0.43
LINC01953-201ENST00000426870 UNC93B1Q9H1C4 597 aa12.38□□□□□ -0.43
LINC01953-201ENST00000426870 GDF9O60383 454 aa12.36□□□□□ -0.43
LINC01953-201ENST00000426870 PPP2R2DQ66LE6 453 aa12.36□□□□□ -0.43
LINC01953-201ENST00000426870 PTCRAQ6ISU1 281 aaPredicted RBP12.36□□□□□ -0.43
LINC01953-201ENST00000426870 TRIM67Q6ZTA4 783 aa12.35□□□□□ -0.43
LINC01953-201ENST00000426870 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
LINC01953-201ENST00000426870 WNT7AO00755 349 aa12.34□□□□□ -0.43
LINC01953-201ENST00000426870 PER1O15534 1290 aaPredicted RBP12.33□□□□□ -0.44
LINC01953-201ENST00000426870 ARMC2Q8NEN0 867 aa12.33□□□□□ -0.44
LINC01953-201ENST00000426870 PKD2L1Q9P0L9 805 aa12.33□□□□□ -0.44
LINC01953-201ENST00000426870 AP1G2O75843 785 aa12.32□□□□□ -0.44
LINC01953-201ENST00000426870 PKDCCQ504Y2 493 aa12.32□□□□□ -0.44
LINC01953-201ENST00000426870 TTC24A2A3L6 582 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms