RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
RPL28-202ENST00000426763 FBXO31Q5XUX0 539 aaPredicted RBP17.18■□□□□ 0.34
RPL28-202ENST00000426763 LRRFIP1Q32MZ4 808 aaKnown RBP17.18■□□□□ 0.34
RPL28-202ENST00000426763 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
RPL28-202ENST00000426763 FAM135AQ9P2D6 1515 aa17.18■□□□□ 0.34
RPL28-202ENST00000426763 NUDT16Q96DE0 195 aaKnown RBP17.17■□□□□ 0.34
RPL28-202ENST00000426763 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
RPL28-202ENST00000426763 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
RPL28-202ENST00000426763 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
RPL28-202ENST00000426763 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
RPL28-202ENST00000426763 IDI1Q13907 227 aa17.17■□□□□ 0.34
RPL28-202ENST00000426763 TOMM22Q9NS69 142 aa17.17■□□□□ 0.34
RPL28-202ENST00000426763 CTTNBP2Q8WZ74 1663 aa17.16■□□□□ 0.34
RPL28-202ENST00000426763 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
RPL28-202ENST00000426763 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
RPL28-202ENST00000426763 RBM19Q9Y4C8 960 aaKnown RBP17.16■□□□□ 0.34
RPL28-202ENST00000426763 WDR62O43379 1518 aa17.15■□□□□ 0.34
RPL28-202ENST00000426763 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
RPL28-202ENST00000426763 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
RPL28-202ENST00000426763 GBP4Q96PP9 640 aa17.15■□□□□ 0.34
RPL28-202ENST00000426763 TOM1L2Q6ZVM7 507 aa17.15■□□□□ 0.34
RPL28-202ENST00000426763 G3BP1Q13283 466 aaKnown RBP eCLIP17.15■□□□□ 0.34
RPL28-202ENST00000426763 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
RPL28-202ENST00000426763 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
RPL28-202ENST00000426763 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
RPL28-202ENST00000426763 AIMP1Q12904 312 aaKnown RBP17.14■□□□□ 0.33
RPL28-202ENST00000426763 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
RPL28-202ENST00000426763 NUTM2BA6NNL0 878 aaPredicted RBP17.13■□□□□ 0.33
RPL28-202ENST00000426763 NUTM2EB1AL46 878 aaPredicted RBP17.13■□□□□ 0.33
RPL28-202ENST00000426763 NUTM2AQ8IVF1 878 aaPredicted RBP17.13■□□□□ 0.33
RPL28-202ENST00000426763 NRDCO43847 1150 aa17.13■□□□□ 0.33
RPL28-202ENST00000426763 CCDC30Q5VVM6 783 aa17.13■□□□□ 0.33
RPL28-202ENST00000426763 PTMSP20962 102 aa17.13■□□□□ 0.33
RPL28-202ENST00000426763 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
RPL28-202ENST00000426763 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
RPL28-202ENST00000426763 ST18O60284 1047 aa17.12■□□□□ 0.33
RPL28-202ENST00000426763 KDM5BQ9UGL1 1544 aa17.12■□□□□ 0.33
RPL28-202ENST00000426763 DIAPH3Q9NSV4 1193 aa17.12■□□□□ 0.33
RPL28-202ENST00000426763 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
RPL28-202ENST00000426763 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
RPL28-202ENST00000426763 NOL10Q9BSC4 688 aaKnown RBP17.11■□□□□ 0.33
RPL28-202ENST00000426763 AAMPQ13685 434 aa17.11■□□□□ 0.33
RPL28-202ENST00000426763 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
RPL28-202ENST00000426763 PIP4K2BP78356 416 aa17.1■□□□□ 0.33
RPL28-202ENST00000426763 KCNH5Q8NCM2 988 aa17.1■□□□□ 0.33
RPL28-202ENST00000426763 RUFY2Q8WXA3 655 aa17.1■□□□□ 0.33
RPL28-202ENST00000426763 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
RPL28-202ENST00000426763 VPS37DQ86XT2 251 aa17.1■□□□□ 0.33
RPL28-202ENST00000426763 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
RPL28-202ENST00000426763 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
RPL28-202ENST00000426763 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
RPL28-202ENST00000426763 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
RPL28-202ENST00000426763 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
RPL28-202ENST00000426763 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
RPL28-202ENST00000426763 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
RPL28-202ENST00000426763 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
RPL28-202ENST00000426763 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
RPL28-202ENST00000426763 TNRQ92752 1358 aa17.09■□□□□ 0.33
RPL28-202ENST00000426763 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.33
RPL28-202ENST00000426763 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
RPL28-202ENST00000426763 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.32
RPL28-202ENST00000426763 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
RPL28-202ENST00000426763 DUOX2Q9NRD8 1548 aa17.07■□□□□ 0.32
RPL28-202ENST00000426763 CABP4P57796 275 aa17.07■□□□□ 0.32
RPL28-202ENST00000426763 FAM161AQ3B820 660 aa17.07■□□□□ 0.32
RPL28-202ENST00000426763 NOS1P29475 1434 aa17.07■□□□□ 0.32
RPL28-202ENST00000426763 RRS1Q15050 365 aaKnown RBP17.07■□□□□ 0.32
RPL28-202ENST00000426763 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
RPL28-202ENST00000426763 A2MP01023 1474 aa17.07■□□□□ 0.32
RPL28-202ENST00000426763 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
RPL28-202ENST00000426763 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
RPL28-202ENST00000426763 KIF6Q6ZMV9 814 aa17.06■□□□□ 0.32
RPL28-202ENST00000426763 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
RPL28-202ENST00000426763 DDX54Q8TDD1 881 aaKnown RBP17.06■□□□□ 0.32
RPL28-202ENST00000426763 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
RPL28-202ENST00000426763 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
RPL28-202ENST00000426763 RBM33Q96EV2 1170 aaKnown RBP17.05■□□□□ 0.32
RPL28-202ENST00000426763 CCDC34Q96HJ3 373 aa17.05■□□□□ 0.32
RPL28-202ENST00000426763 NUP160Q12769 1436 aa17.05■□□□□ 0.32
RPL28-202ENST00000426763 GNAI3P08754 354 aa17.04■□□□□ 0.32
RPL28-202ENST00000426763 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
RPL28-202ENST00000426763 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
RPL28-202ENST00000426763 REC8O95072 547 aa17.04■□□□□ 0.32
RPL28-202ENST00000426763 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
RPL28-202ENST00000426763 CLSTN1O94985 981 aa17.03■□□□□ 0.32
RPL28-202ENST00000426763 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
RPL28-202ENST00000426763 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
RPL28-202ENST00000426763 ERC2O15083 957 aa17.03■□□□□ 0.32
RPL28-202ENST00000426763 FCHSD2O94868 740 aa17.03■□□□□ 0.32
RPL28-202ENST00000426763 C14orf93Q9H972 538 aaKnown RBP17.03■□□□□ 0.32
RPL28-202ENST00000426763 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
RPL28-202ENST00000426763 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.32
RPL28-202ENST00000426763 HDGFL1Q5TGJ6 251 aa17.02■□□□□ 0.31
RPL28-202ENST00000426763 WDR63Q8IWG1 891 aa17.02■□□□□ 0.31
RPL28-202ENST00000426763 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
RPL28-202ENST00000426763 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
RPL28-202ENST00000426763 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
RPL28-202ENST00000426763 SCAF11Q99590 1463 aaKnown RBP17.01■□□□□ 0.31
RPL28-202ENST00000426763 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
RPL28-202ENST00000426763 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms