RNA–Protein interactions for RNA: ENST00000426471.6

LINC00993-202, long intergenic non-protein coding RNA 993, humanhuman

TSL 2

Gene LINC00993, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-202ENST00000426471 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
LINC00993-202ENST00000426471 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
LINC00993-202ENST00000426471 HOXA2O43364 376 aa11.26□□□□□ -0.61
LINC00993-202ENST00000426471 DGAT1O75907 488 aa11.26□□□□□ -0.61
LINC00993-202ENST00000426471 HLA-CQ95604 372 aa11.26□□□□□ -0.61
LINC00993-202ENST00000426471 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
LINC00993-202ENST00000426471 GDF9O60383 454 aa11.25□□□□□ -0.61
LINC00993-202ENST00000426471 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
LINC00993-202ENST00000426471 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
LINC00993-202ENST00000426471 GUCA2AQ02747 115 aa11.23□□□□□ -0.61
LINC00993-202ENST00000426471 ZMYND10O75800 440 aa11.22□□□□□ -0.61
LINC00993-202ENST00000426471 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
LINC00993-202ENST00000426471 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
LINC00993-202ENST00000426471 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
LINC00993-202ENST00000426471 MMP16P51512 607 aa11.2□□□□□ -0.62
LINC00993-202ENST00000426471 CYP4X1Q8N118 509 aa11.2□□□□□ -0.62
LINC00993-202ENST00000426471 PKD2L1Q9P0L9 805 aa11.2□□□□□ -0.62
LINC00993-202ENST00000426471 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
LINC00993-202ENST00000426471 DXOO77932 396 aaKnown RBP11.18□□□□□ -0.62
LINC00993-202ENST00000426471 MYT1Q01538 1121 aa11.18□□□□□ -0.62
LINC00993-202ENST00000426471 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
LINC00993-202ENST00000426471 FDX1P10109 184 aa11.17□□□□□ -0.62
LINC00993-202ENST00000426471 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
LINC00993-202ENST00000426471 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
LINC00993-202ENST00000426471 TRIM32Q13049 653 aa11.16□□□□□ -0.62
LINC00993-202ENST00000426471 AMHR2Q16671 573 aa11.15□□□□□ -0.62
LINC00993-202ENST00000426471 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
LINC00993-202ENST00000426471 JUNDP17535 347 aa11.14□□□□□ -0.63
LINC00993-202ENST00000426471 RETREG3Q86VR2 466 aa11.14□□□□□ -0.63
LINC00993-202ENST00000426471 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
LINC00993-202ENST00000426471 BEGAINQ9BUH8 593 aa11.12□□□□□ -0.63
LINC00993-202ENST00000426471 NDUFV2P19404 249 aa11.11□□□□□ -0.63
LINC00993-202ENST00000426471 AK7Q96M32 723 aa11.11□□□□□ -0.63
LINC00993-202ENST00000426471 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
LINC00993-202ENST00000426471 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
LINC00993-202ENST00000426471 TOR4AQ9NXH8 423 aa11.1□□□□□ -0.63
LINC00993-202ENST00000426471 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
LINC00993-202ENST00000426471 WNT7AO00755 349 aa11.09□□□□□ -0.63
LINC00993-202ENST00000426471 PCDHGC3Q9UN70 934 aa11.09□□□□□ -0.63
LINC00993-202ENST00000426471 TRIM66O15016 1216 aa11.08□□□□□ -0.64
LINC00993-202ENST00000426471 MS4A1P11836 297 aa11.07□□□□□ -0.64
LINC00993-202ENST00000426471 DIXDC1Q155Q3 683 aa11.07□□□□□ -0.64
LINC00993-202ENST00000426471 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
LINC00993-202ENST00000426471 SNIP1Q8TAD8 396 aaKnown RBP11.07□□□□□ -0.64
LINC00993-202ENST00000426471 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
LINC00993-202ENST00000426471 MRGPRX2Q96LB1 330 aa11.06□□□□□ -0.64
LINC00993-202ENST00000426471 AXIN1O15169 862 aa11.05□□□□□ -0.64
LINC00993-202ENST00000426471 RC3H1Q5TC82 1133 aaKnown RBP11.05□□□□□ -0.64
LINC00993-202ENST00000426471 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
LINC00993-202ENST00000426471 MTMR2Q13614 643 aa11.04□□□□□ -0.64
LINC00993-202ENST00000426471 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
LINC00993-202ENST00000426471 CCNYL3P0C7X3 344 aa11.03□□□□□ -0.64
LINC00993-202ENST00000426471 WNT7BP56706 349 aa11.03□□□□□ -0.64
LINC00993-202ENST00000426471 SPDYE5A6NIY4 337 aa11.02□□□□□ -0.65
LINC00993-202ENST00000426471 CTC1Q2NKJ3 1217 aa11.02□□□□□ -0.65
LINC00993-202ENST00000426471 POTECB2RU33 542 aa11.01□□□□□ -0.65
LINC00993-202ENST00000426471 AVPP01185 164 aa11.01□□□□□ -0.65
LINC00993-202ENST00000426471 J3QL48 77 aa11□□□□□ -0.65
LINC00993-202ENST00000426471 SKOR1P84550 965 aa11□□□□□ -0.65
LINC00993-202ENST00000426471 PTPRNQ16849 979 aa11□□□□□ -0.65
LINC00993-202ENST00000426471 PTCRAQ6ISU1 281 aaPredicted RBP11□□□□□ -0.65
LINC00993-202ENST00000426471 CRIPAKQ8N1N5 446 aa11□□□□□ -0.65
LINC00993-202ENST00000426471 ZNF775Q96BV0 537 aaPredicted RBP11□□□□□ -0.65
LINC00993-202ENST00000426471 SMPD1P17405 629 aa10.99□□□□□ -0.65
LINC00993-202ENST00000426471 PDE4DQ08499 809 aa10.99□□□□□ -0.65
LINC00993-202ENST00000426471 RSBN1LQ6PCB5 846 aaPredicted RBP10.99□□□□□ -0.65
LINC00993-202ENST00000426471 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
LINC00993-202ENST00000426471 SLC24A3Q9HC58 644 aa10.99□□□□□ -0.65
LINC00993-202ENST00000426471 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
LINC00993-202ENST00000426471 ALDH1A1P00352 501 aa10.97□□□□□ -0.65
LINC00993-202ENST00000426471 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
LINC00993-202ENST00000426471 DACH1Q9UI36 760 aa10.97□□□□□ -0.65
LINC00993-202ENST00000426471 CTHP32929 405 aa10.96□□□□□ -0.65
LINC00993-202ENST00000426471 GJA5P36382 358 aa10.96□□□□□ -0.65
LINC00993-202ENST00000426471 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.65
LINC00993-202ENST00000426471 UNC93B1Q9H1C4 597 aa10.96□□□□□ -0.65
LINC00993-202ENST00000426471 EVA1BQ9NVM1 165 aa10.96□□□□□ -0.65
LINC00993-202ENST00000426471 SPTLC1O15269 473 aa10.95□□□□□ -0.66
LINC00993-202ENST00000426471 SMCPP49901 116 aaPredicted RBP10.95□□□□□ -0.66
LINC00993-202ENST00000426471 KCNH2Q12809 1159 aa10.95□□□□□ -0.66
LINC00993-202ENST00000426471 LINC01559Q495D7 138 aa10.95□□□□□ -0.66
LINC00993-202ENST00000426471 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
LINC00993-202ENST00000426471 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
LINC00993-202ENST00000426471 DESI1Q6ICB0 168 aa10.94□□□□□ -0.66
LINC00993-202ENST00000426471 TSC1Q92574 1164 aa10.94□□□□□ -0.66
LINC00993-202ENST00000426471 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
LINC00993-202ENST00000426471 SH3BP2P78314 561 aa10.93□□□□□ -0.66
LINC00993-202ENST00000426471 HPS1Q92902 700 aa10.93□□□□□ -0.66
LINC00993-202ENST00000426471 WASF2Q9Y6W5 498 aa10.93□□□□□ -0.66
LINC00993-202ENST00000426471 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
LINC00993-202ENST00000426471 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
LINC00993-202ENST00000426471 HRCP23327 699 aa10.92□□□□□ -0.66
LINC00993-202ENST00000426471 NUTM2DQ5VT03 806 aaPredicted RBP10.92□□□□□ -0.66
LINC00993-202ENST00000426471 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
LINC00993-202ENST00000426471 BAP1Q92560 729 aa10.92□□□□□ -0.66
LINC00993-202ENST00000426471 CABLES1Q8TDN4 633 aa10.91□□□□□ -0.66
LINC00993-202ENST00000426471 CFAP99D6REC4 459 aa10.9□□□□□ -0.66
LINC00993-202ENST00000426471 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
LINC00993-202ENST00000426471 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
LINC00993-202ENST00000426471 LYPD8Q6UX82 237 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms