RNA–Protein interactions for RNA: ENST00000426221.5

SCML4-205, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 3

Gene SCML4, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-205ENST00000426221 ADGRB2O60241 1585 aa22.27■■□□□ 1.16
SCML4-205ENST00000426221 NHSL1Q5SYE7 1610 aa22.27■■□□□ 1.16
SCML4-205ENST00000426221 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
SCML4-205ENST00000426221 ATF3P18847 181 aa22.25■■□□□ 1.15
SCML4-205ENST00000426221 HSPA1LP34931 641 aa22.24■■□□□ 1.15
SCML4-205ENST00000426221 CADPS2Q86UW7 1296 aa22.24■■□□□ 1.15
SCML4-205ENST00000426221 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
SCML4-205ENST00000426221 COL16A1Q07092 1604 aaPredicted RBP22.24■■□□□ 1.15
SCML4-205ENST00000426221 AHDC1Q5TGY3 1603 aaPredicted RBP22.23■■□□□ 1.15
SCML4-205ENST00000426221 USP32Q8NFA0 1604 aa22.22■■□□□ 1.15
SCML4-205ENST00000426221 SAFB2Q14151 953 aaKnown RBP eCLIP22.22■■□□□ 1.15
SCML4-205ENST00000426221 NBPF1Q3BBV0 1214 aa22.22■■□□□ 1.15
SCML4-205ENST00000426221 SLAIN2Q9P270 581 aa22.22■■□□□ 1.15
SCML4-205ENST00000426221 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
SCML4-205ENST00000426221 C1orf167Q5SNV9 1468 aa22.21■■□□□ 1.15
SCML4-205ENST00000426221 RALGAPBQ86X10 1494 aa22.19■■□□□ 1.14
SCML4-205ENST00000426221 NBPF8Q3BBV2 869 aa22.18■■□□□ 1.14
SCML4-205ENST00000426221 POGKQ9P215 609 aa22.16■■□□□ 1.14
SCML4-205ENST00000426221 KIF1AQ12756 1690 aa22.16■■□□□ 1.14
SCML4-205ENST00000426221 ROCK2O75116 1388 aaKnown RBP22.15■■□□□ 1.14
SCML4-205ENST00000426221 BRINP3Q76B58 766 aa22.15■■□□□ 1.14
SCML4-205ENST00000426221 CCER1Q8TC90 406 aaPredicted RBP22.15■■□□□ 1.14
SCML4-205ENST00000426221 SIRT1Q96EB6 747 aa22.15■■□□□ 1.14
SCML4-205ENST00000426221 ITSN1Q15811 1721 aa22.14■■□□□ 1.13
SCML4-205ENST00000426221 MINK1Q8N4C8 1332 aaPredicted RBP22.13■■□□□ 1.13
SCML4-205ENST00000426221 NUTM2FA1L443 756 aa22.13■■□□□ 1.13
SCML4-205ENST00000426221 TOPAZ1Q8N9V7 1692 aa22.13■■□□□ 1.13
SCML4-205ENST00000426221 CLSPNQ9HAW4 1339 aa22.12■■□□□ 1.13
SCML4-205ENST00000426221 SHPRHQ149N8 1683 aa22.12■■□□□ 1.13
SCML4-205ENST00000426221 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
SCML4-205ENST00000426221 MED1Q15648 1581 aaPredicted RBP22.12■■□□□ 1.13
SCML4-205ENST00000426221 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
SCML4-205ENST00000426221 GPRASP1Q5JY77 1395 aa22.1■■□□□ 1.13
SCML4-205ENST00000426221 DDX17Q92841 729 aaKnown RBP22.09■■□□□ 1.13
SCML4-205ENST00000426221 ORAI2Q96SN7 254 aa22.09■■□□□ 1.13
SCML4-205ENST00000426221 ATP7BP35670 1465 aa22.05■■□□□ 1.12
SCML4-205ENST00000426221 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
SCML4-205ENST00000426221 CENPJQ9HC77 1338 aaPredicted RBP22.04■■□□□ 1.12
SCML4-205ENST00000426221 ESCO1Q5FWF5 840 aa22.03■■□□□ 1.12
SCML4-205ENST00000426221 PXDNQ92626 1479 aa22.03■■□□□ 1.12
SCML4-205ENST00000426221 PRR36Q9H6K5 1346 aa22.02■■□□□ 1.12
SCML4-205ENST00000426221 EIF3AQ14152 1382 aaKnown RBP22■■□□□ 1.11
SCML4-205ENST00000426221 TRPM3Q9HCF6 1732 aaPredicted RBP22■■□□□ 1.11
SCML4-205ENST00000426221 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
SCML4-205ENST00000426221 WASLO00401 505 aaPredicted RBP21.99■■□□□ 1.11
SCML4-205ENST00000426221 COL22A1Q8NFW1 1626 aaPredicted RBP21.98■■□□□ 1.11
SCML4-205ENST00000426221 JCADQ9P266 1359 aa21.98■■□□□ 1.11
SCML4-205ENST00000426221 LRP6O75581 1613 aa21.97■■□□□ 1.11
SCML4-205ENST00000426221 ABCA3Q99758 1704 aa21.97■■□□□ 1.11
SCML4-205ENST00000426221 XPCQ01831 940 aaPredicted RBP21.96■■□□□ 1.11
SCML4-205ENST00000426221 FOXO3O43524 673 aa21.93■■□□□ 1.1
SCML4-205ENST00000426221 SOS2Q07890 1332 aaPredicted RBP21.93■■□□□ 1.1
SCML4-205ENST00000426221 NPHP3Q7Z494 1330 aa21.93■■□□□ 1.1
SCML4-205ENST00000426221 PNPLA6Q8IY17 1366 aa21.93■■□□□ 1.1
SCML4-205ENST00000426221 PMFBP1Q8TBY8 1022 aa21.93■■□□□ 1.1
SCML4-205ENST00000426221 ALS2Q96Q42 1657 aa21.93■■□□□ 1.1
SCML4-205ENST00000426221 CDK19Q9BWU1 502 aa21.93■■□□□ 1.1
SCML4-205ENST00000426221 PHF8Q9UPP1 1060 aa21.93■■□□□ 1.1
SCML4-205ENST00000426221 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
SCML4-205ENST00000426221 AKAP12Q02952 1782 aa21.92■■□□□ 1.1
SCML4-205ENST00000426221 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
SCML4-205ENST00000426221 CRYBG1Q9Y4K1 1723 aa21.89■■□□□ 1.1
SCML4-205ENST00000426221 USP47Q96K76 1375 aa21.89■■□□□ 1.1
SCML4-205ENST00000426221 NUDT16Q96DE0 195 aaKnown RBP21.89■■□□□ 1.09
SCML4-205ENST00000426221 CABP2Q9NPB3 220 aa21.89■■□□□ 1.09
SCML4-205ENST00000426221 DISP3Q9P2K9 1392 aa21.88■■□□□ 1.09
SCML4-205ENST00000426221 SBNO2Q9Y2G9 1366 aa21.88■■□□□ 1.09
SCML4-205ENST00000426221 SRPK2P78362 688 aaKnown RBP21.88■■□□□ 1.09
SCML4-205ENST00000426221 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
SCML4-205ENST00000426221 TNS3Q68CZ2 1445 aa21.87■■□□□ 1.09
SCML4-205ENST00000426221 LRRC59Q96AG4 307 aaKnown RBP21.86■■□□□ 1.09
SCML4-205ENST00000426221 EVC2Q86UK5 1308 aa21.85■■□□□ 1.09
SCML4-205ENST00000426221 NRKQ7Z2Y5 1582 aa21.85■■□□□ 1.09
SCML4-205ENST00000426221 MON2Q7Z3U7 1717 aa21.85■■□□□ 1.09
SCML4-205ENST00000426221 KRT28Q7Z3Y7 464 aa21.84■■□□□ 1.09
SCML4-205ENST00000426221 PHRF1Q9P1Y6 1649 aaKnown RBP21.84■■□□□ 1.09
SCML4-205ENST00000426221 SPATA31A6Q5VVP1 1343 aa21.83■■□□□ 1.09
SCML4-205ENST00000426221 NUTM2BA6NNL0 878 aaPredicted RBP21.82■■□□□ 1.08
SCML4-205ENST00000426221 NUTM2EB1AL46 878 aaPredicted RBP21.82■■□□□ 1.08
SCML4-205ENST00000426221 NUTM2AQ8IVF1 878 aaPredicted RBP21.82■■□□□ 1.08
SCML4-205ENST00000426221 ST20-MTHFSA0A0A6YYL1 179 aa21.81■■□□□ 1.08
SCML4-205ENST00000426221 POLR3AO14802 1390 aaPredicted RBP21.81■■□□□ 1.08
SCML4-205ENST00000426221 MYOM1P52179 1685 aa21.81■■□□□ 1.08
SCML4-205ENST00000426221 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
SCML4-205ENST00000426221 NGDNQ8NEJ9 315 aaKnown RBP21.8■■□□□ 1.08
SCML4-205ENST00000426221 SBNO1A3KN83 1393 aa21.79■■□□□ 1.08
SCML4-205ENST00000426221 PSME1Q06323 249 aa21.79■■□□□ 1.08
SCML4-205ENST00000426221 TESK2Q96S53 571 aa21.79■■□□□ 1.08
SCML4-205ENST00000426221 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
SCML4-205ENST00000426221 ACEP12821 1306 aa21.79■■□□□ 1.08
SCML4-205ENST00000426221 PIK3C2AO00443 1686 aa21.79■■□□□ 1.08
SCML4-205ENST00000426221 PLCH1Q4KWH8 1693 aa21.77■■□□□ 1.08
SCML4-205ENST00000426221 PLEKHG5O94827 1062 aa21.77■■□□□ 1.08
SCML4-205ENST00000426221 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
SCML4-205ENST00000426221 ATAD2Q6PL18 1390 aa21.76■■□□□ 1.07
SCML4-205ENST00000426221 PLEKHG3A1L390 1219 aa21.75■■□□□ 1.07
SCML4-205ENST00000426221 MEX3CQ5U5Q3 659 aaKnown RBP21.75■■□□□ 1.07
SCML4-205ENST00000426221 LMOD2Q6P5Q4 547 aa21.74■■□□□ 1.07
SCML4-205ENST00000426221 CABP1Q9NZU7 370 aa21.74■■□□□ 1.07
SCML4-205ENST00000426221 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms