RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 USP47Q96K76 1375 aa33.97■■■■□ 3.03
APOE-202ENST00000425718 WAPLQ7Z5K2 1190 aa33.96■■■■□ 3.03
APOE-202ENST00000425718 C19orf44Q9H6X5 657 aa33.96■■■■□ 3.03
APOE-202ENST00000425718 CERKQ8TCT0 537 aa33.95■■■■□ 3.03
APOE-202ENST00000425718 ADGRB2O60241 1585 aa33.94■■■■□ 3.02
APOE-202ENST00000425718 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.93■■■■□ 3.02
APOE-202ENST00000425718 PLEKHH1Q9ULM0 1364 aa33.92■■■■□ 3.02
APOE-202ENST00000425718 SBNO2Q9Y2G9 1366 aa33.92■■■■□ 3.02
APOE-202ENST00000425718 CDC42BPGQ6DT37 1551 aa33.91■■■■□ 3.02
APOE-202ENST00000425718 EIF4G2P78344 907 aaKnown RBP eCLIP33.91■■■■□ 3.02
APOE-202ENST00000425718 ATF3P18847 181 aa33.88■■■■□ 3.01
APOE-202ENST00000425718 SAFB2Q14151 953 aaKnown RBP eCLIP33.88■■■■□ 3.01
APOE-202ENST00000425718 CADPS2Q86UW7 1296 aa33.88■■■■□ 3.01
APOE-202ENST00000425718 RBM33Q96EV2 1170 aaKnown RBP33.85■■■■□ 3.01
APOE-202ENST00000425718 MINK1Q8N4C8 1332 aaPredicted RBP33.83■■■■□ 3.01
APOE-202ENST00000425718 ST20-MTHFSA0A0A6YYL1 179 aa33.82■■■■□ 3
APOE-202ENST00000425718 TOM1O60784 492 aa33.81■■■■□ 3
APOE-202ENST00000425718 FMN2Q9NZ56 1722 aa33.81■■■■□ 3
APOE-202ENST00000425718 EVC2Q86UK5 1308 aa33.79■■■■□ 3
APOE-202ENST00000425718 WASLO00401 505 aaPredicted RBP33.77■■■■□ 3
APOE-202ENST00000425718 ANKARQ7Z5J8 1434 aa33.74■■■□□ 2.99
APOE-202ENST00000425718 HSPA5P11021 654 aaKnown RBP33.74■■■□□ 2.99
APOE-202ENST00000425718 HIRIP3Q9BW71 556 aaPredicted RBP33.74■■■□□ 2.99
APOE-202ENST00000425718 ITSN1Q15811 1721 aa33.73■■■□□ 2.99
APOE-202ENST00000425718 TMF1P82094 1093 aa33.73■■■□□ 2.99
APOE-202ENST00000425718 CDCA8Q53HL2 280 aa33.73■■■□□ 2.99
APOE-202ENST00000425718 TULP4Q9NRJ4 1543 aa33.73■■■□□ 2.99
APOE-202ENST00000425718 TESK2Q96S53 571 aa33.72■■■□□ 2.99
APOE-202ENST00000425718 PUS7Q96PZ0 661 aaKnown RBP33.71■■■□□ 2.99
APOE-202ENST00000425718 MST1RQ04912 1400 aa33.7■■■□□ 2.98
APOE-202ENST00000425718 UBAP1LF5GYI3 381 aa33.69■■■□□ 2.98
APOE-202ENST00000425718 CDK19Q9BWU1 502 aa33.69■■■□□ 2.98
APOE-202ENST00000425718 SLAIN2Q9P270 581 aa33.68■■■□□ 2.98
APOE-202ENST00000425718 SRPK2P78362 688 aaKnown RBP33.67■■■□□ 2.98
APOE-202ENST00000425718 RGPD8O14715 1765 aaPredicted RBP33.65■■■□□ 2.98
APOE-202ENST00000425718 C1orf167Q5SNV9 1468 aa33.65■■■□□ 2.98
APOE-202ENST00000425718 ATAD2Q6PL18 1390 aa33.65■■■□□ 2.98
APOE-202ENST00000425718 KIF1AQ12756 1690 aa33.63■■■□□ 2.97
APOE-202ENST00000425718 USP32Q8NFA0 1604 aa33.61■■■□□ 2.97
APOE-202ENST00000425718 ATP7BP35670 1465 aa33.6■■■□□ 2.97
APOE-202ENST00000425718 NUDT16Q96DE0 195 aaKnown RBP33.59■■■□□ 2.97
APOE-202ENST00000425718 TOPAZ1Q8N9V7 1692 aa33.58■■■□□ 2.97
APOE-202ENST00000425718 CCDC61Q9Y6R9 512 aa33.58■■■□□ 2.97
APOE-202ENST00000425718 ROBO1Q9Y6N7 1651 aa33.56■■■□□ 2.96
APOE-202ENST00000425718 CABP2Q9NPB3 220 aa33.56■■■□□ 2.96
APOE-202ENST00000425718 NINLQ9Y2I6 1382 aa33.56■■■□□ 2.96
APOE-202ENST00000425718 NUTM2FA1L443 756 aa33.54■■■□□ 2.96
APOE-202ENST00000425718 ESCO1Q5FWF5 840 aa33.54■■■□□ 2.96
APOE-202ENST00000425718 DISP3Q9P2K9 1392 aa33.54■■■□□ 2.96
APOE-202ENST00000425718 PRR36Q9H6K5 1346 aa33.52■■■□□ 2.96
APOE-202ENST00000425718 PHF8Q9UPP1 1060 aa33.5■■■□□ 2.95
APOE-202ENST00000425718 SCAF1Q9H7N4 1312 aaKnown RBP33.5■■■□□ 2.95
APOE-202ENST00000425718 PIP4K2BP78356 416 aa33.49■■■□□ 2.95
APOE-202ENST00000425718 PPIP5K1Q6PFW1 1433 aa33.49■■■□□ 2.95
APOE-202ENST00000425718 BRINP3Q76B58 766 aa33.49■■■□□ 2.95
APOE-202ENST00000425718 FBXO41Q8TF61 875 aa33.48■■■□□ 2.95
APOE-202ENST00000425718 PLEKHG3A1L390 1219 aa33.47■■■□□ 2.95
APOE-202ENST00000425718 NHSL1Q5SYE7 1610 aa33.46■■■□□ 2.95
APOE-202ENST00000425718 ORAI2Q96SN7 254 aa33.46■■■□□ 2.95
APOE-202ENST00000425718 NPHP3Q7Z494 1330 aa33.45■■■□□ 2.95
APOE-202ENST00000425718 AHDC1Q5TGY3 1603 aaPredicted RBP33.44■■■□□ 2.94
APOE-202ENST00000425718 NGDNQ8NEJ9 315 aaKnown RBP33.42■■■□□ 2.94
APOE-202ENST00000425718 AKAP12Q02952 1782 aa33.4■■■□□ 2.94
APOE-202ENST00000425718 POLR3AO14802 1390 aaPredicted RBP33.4■■■□□ 2.94
APOE-202ENST00000425718 TMC1Q8TDI8 760 aa33.4■■■□□ 2.94
APOE-202ENST00000425718 CABP1Q9NZU7 370 aa33.4■■■□□ 2.94
APOE-202ENST00000425718 BRD4O60885 1362 aaPredicted RBP33.39■■■□□ 2.94
APOE-202ENST00000425718 ZNF692Q9BU19 519 aaPredicted RBP33.39■■■□□ 2.94
APOE-202ENST00000425718 TERF2IPQ9NYB0 399 aa33.39■■■□□ 2.94
APOE-202ENST00000425718 PHLPP1O60346 1717 aa33.39■■■□□ 2.94
APOE-202ENST00000425718 MYOM1P52179 1685 aa33.37■■■□□ 2.93
APOE-202ENST00000425718 PSME1Q06323 249 aa33.37■■■□□ 2.93
APOE-202ENST00000425718 HDGFL2Q7Z4V5 671 aaPredicted RBP33.37■■■□□ 2.93
APOE-202ENST00000425718 PMFBP1Q8TBY8 1022 aa33.37■■■□□ 2.93
APOE-202ENST00000425718 POLR3GLQ9BT43 218 aa33.36■■■□□ 2.93
APOE-202ENST00000425718 ACEP12821 1306 aa33.35■■■□□ 2.93
APOE-202ENST00000425718 KIF7Q2M1P5 1343 aa33.35■■■□□ 2.93
APOE-202ENST00000425718 CCDC7Q96M83 1385 aa33.34■■■□□ 2.93
APOE-202ENST00000425718 FOXO3O43524 673 aa33.34■■■□□ 2.93
APOE-202ENST00000425718 MON2Q7Z3U7 1717 aa33.32■■■□□ 2.92
APOE-202ENST00000425718 SLC12A5Q9H2X9 1139 aa33.31■■■□□ 2.92
APOE-202ENST00000425718 ANKRD36BQ8N2N9 1353 aa33.31■■■□□ 2.92
APOE-202ENST00000425718 CPSF1Q10570 1443 aaKnown RBP33.3■■■□□ 2.92
APOE-202ENST00000425718 C11orf95C9JLR9 678 aaPredicted RBP33.3■■■□□ 2.92
APOE-202ENST00000425718 SOS2Q07890 1332 aaPredicted RBP33.29■■■□□ 2.92
APOE-202ENST00000425718 KRT28Q7Z3Y7 464 aa33.28■■■□□ 2.92
APOE-202ENST00000425718 SBNO1A3KN83 1393 aa33.28■■■□□ 2.92
APOE-202ENST00000425718 PXDNQ92626 1479 aa33.28■■■□□ 2.92
APOE-202ENST00000425718 WASHC2AQ641Q2 1341 aa33.27■■■□□ 2.92
APOE-202ENST00000425718 KTN1Q86UP2 1357 aaKnown RBP33.26■■■□□ 2.92
APOE-202ENST00000425718 COL16A1Q07092 1604 aaPredicted RBP33.26■■■□□ 2.91
APOE-202ENST00000425718 USP6P35125 1406 aa33.26■■■□□ 2.91
APOE-202ENST00000425718 TRPM3Q9HCF6 1732 aaPredicted RBP33.25■■■□□ 2.91
APOE-202ENST00000425718 LRRC59Q96AG4 307 aaKnown RBP33.25■■■□□ 2.91
APOE-202ENST00000425718 CD163L1Q9NR16 1453 aa33.24■■■□□ 2.91
APOE-202ENST00000425718 A0A1W2PP64 1363 aa33.23■■■□□ 2.91
APOE-202ENST00000425718 EDC4Q6P2E9 1401 aaKnown RBP33.22■■■□□ 2.91
APOE-202ENST00000425718 ZNF316A6NFI3 1004 aaPredicted RBP33.22■■■□□ 2.91
APOE-202ENST00000425718 NRKQ7Z2Y5 1582 aa33.2■■■□□ 2.91
APOE-202ENST00000425718 TTC21AQ8NDW8 1320 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms