RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FOXO3O43524 673 aa18.25■□□□□ 0.51
HLA-DQB3-203ENST00000425319 ROBO2Q9HCK4 1378 aa18.25■□□□□ 0.51
HLA-DQB3-203ENST00000425319 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
HLA-DQB3-203ENST00000425319 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
HLA-DQB3-203ENST00000425319 KIF1BO60333 1816 aa18.22■□□□□ 0.51
HLA-DQB3-203ENST00000425319 PSME1Q06323 249 aa18.22■□□□□ 0.51
HLA-DQB3-203ENST00000425319 NHSL1Q5SYE7 1610 aa18.22■□□□□ 0.51
HLA-DQB3-203ENST00000425319 ANKRD30BQ9BXX2 1392 aa18.21■□□□□ 0.51
HLA-DQB3-203ENST00000425319 CLTCL1P53675 1640 aa18.21■□□□□ 0.51
HLA-DQB3-203ENST00000425319 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
HLA-DQB3-203ENST00000425319 RGS12O14924 1447 aa18.21■□□□□ 0.51
HLA-DQB3-203ENST00000425319 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
HLA-DQB3-203ENST00000425319 SF3B2Q13435 895 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB3-203ENST00000425319 GJD4Q96KN9 370 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB3-203ENST00000425319 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
HLA-DQB3-203ENST00000425319 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
HLA-DQB3-203ENST00000425319 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB3-203ENST00000425319 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
HLA-DQB3-203ENST00000425319 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
HLA-DQB3-203ENST00000425319 PRAG1Q86YV5 1406 aa18.16■□□□□ 0.5
HLA-DQB3-203ENST00000425319 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
HLA-DQB3-203ENST00000425319 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
HLA-DQB3-203ENST00000425319 UNC5CLQ8IV45 518 aa18.15■□□□□ 0.5
HLA-DQB3-203ENST00000425319 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
HLA-DQB3-203ENST00000425319 NALCNQ8IZF0 1738 aa18.13■□□□□ 0.49
HLA-DQB3-203ENST00000425319 LMOD2Q6P5Q4 547 aa18.13■□□□□ 0.49
HLA-DQB3-203ENST00000425319 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB3-203ENST00000425319 DHX57Q6P158 1386 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB3-203ENST00000425319 POGKQ9P215 609 aa18.12■□□□□ 0.49
HLA-DQB3-203ENST00000425319 ATRNO75882 1429 aa18.12■□□□□ 0.49
HLA-DQB3-203ENST00000425319 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
HLA-DQB3-203ENST00000425319 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
HLA-DQB3-203ENST00000425319 C14orf93Q9H972 538 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB3-203ENST00000425319 LAMC1P11047 1609 aa18.08■□□□□ 0.48
HLA-DQB3-203ENST00000425319 A0A0G2JS52 829 aa18.07■□□□□ 0.48
HLA-DQB3-203ENST00000425319 MYT1Q01538 1121 aa18.07■□□□□ 0.48
HLA-DQB3-203ENST00000425319 CDC42BPGQ6DT37 1551 aa18.07■□□□□ 0.48
HLA-DQB3-203ENST00000425319 MYOM2P54296 1465 aa18.07■□□□□ 0.48
HLA-DQB3-203ENST00000425319 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
HLA-DQB3-203ENST00000425319 BCL9LQ86UU0 1499 aa18.06■□□□□ 0.48
HLA-DQB3-203ENST00000425319 TECPR2O15040 1411 aa18.06■□□□□ 0.48
HLA-DQB3-203ENST00000425319 YTHDC2Q9H6S0 1430 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB3-203ENST00000425319 PXDNQ92626 1479 aa18.04■□□□□ 0.48
HLA-DQB3-203ENST00000425319 VPS72Q15906 364 aa18.04■□□□□ 0.48
HLA-DQB3-203ENST00000425319 ARHGEF10O15013 1369 aa18.04■□□□□ 0.48
HLA-DQB3-203ENST00000425319 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
HLA-DQB3-203ENST00000425319 CFAP70Q5T0N1 1121 aa18.03■□□□□ 0.48
HLA-DQB3-203ENST00000425319 SEPT12Q8IYM1 358 aa18.03■□□□□ 0.48
HLA-DQB3-203ENST00000425319 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
HLA-DQB3-203ENST00000425319 COL22A1Q8NFW1 1626 aaPredicted RBP18.02■□□□□ 0.48
HLA-DQB3-203ENST00000425319 STAC3Q96MF2 364 aa18.02■□□□□ 0.48
HLA-DQB3-203ENST00000425319 PPLO60437 1756 aa18.02■□□□□ 0.47
HLA-DQB3-203ENST00000425319 SPATA31E1Q6ZUB1 1445 aa18.01■□□□□ 0.47
HLA-DQB3-203ENST00000425319 GPRASP1Q5JY77 1395 aa18.01■□□□□ 0.47
HLA-DQB3-203ENST00000425319 PLEKHH1Q9ULM0 1364 aa18.01■□□□□ 0.47
HLA-DQB3-203ENST00000425319 BLMP54132 1417 aaPredicted RBP18■□□□□ 0.47
HLA-DQB3-203ENST00000425319 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
HLA-DQB3-203ENST00000425319 CABLES1Q8TDN4 633 aa18■□□□□ 0.47
HLA-DQB3-203ENST00000425319 SBNO1A3KN83 1393 aa18■□□□□ 0.47
HLA-DQB3-203ENST00000425319 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
HLA-DQB3-203ENST00000425319 PIK3C2GO75747 1445 aa17.99■□□□□ 0.47
HLA-DQB3-203ENST00000425319 BAG6P46379 1132 aa17.99■□□□□ 0.47
HLA-DQB3-203ENST00000425319 PMFBP1Q8TBY8 1022 aa17.99■□□□□ 0.47
HLA-DQB3-203ENST00000425319 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
HLA-DQB3-203ENST00000425319 RALGAPBQ86X10 1494 aa17.97■□□□□ 0.47
HLA-DQB3-203ENST00000425319 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
HLA-DQB3-203ENST00000425319 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB3-203ENST00000425319 SLIT2O94813 1529 aa17.97■□□□□ 0.47
HLA-DQB3-203ENST00000425319 PAK3O75914 559 aaPredicted RBP17.96■□□□□ 0.47
HLA-DQB3-203ENST00000425319 TRAK1Q9UPV9 953 aa17.96■□□□□ 0.47
HLA-DQB3-203ENST00000425319 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
HLA-DQB3-203ENST00000425319 FAM83GA6ND36 823 aa17.95■□□□□ 0.46
HLA-DQB3-203ENST00000425319 KIF1AQ12756 1690 aa17.94■□□□□ 0.46
HLA-DQB3-203ENST00000425319 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
HLA-DQB3-203ENST00000425319 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
HLA-DQB3-203ENST00000425319 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
HLA-DQB3-203ENST00000425319 BTG4Q9NY30 223 aa17.93■□□□□ 0.46
HLA-DQB3-203ENST00000425319 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB3-203ENST00000425319 MINK1Q8N4C8 1332 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB3-203ENST00000425319 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB3-203ENST00000425319 FAM98CQ17RN3 349 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB3-203ENST00000425319 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
HLA-DQB3-203ENST00000425319 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.45
HLA-DQB3-203ENST00000425319 KNDC1Q76NI1 1749 aa17.88■□□□□ 0.45
HLA-DQB3-203ENST00000425319 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
HLA-DQB3-203ENST00000425319 EVA1CP58658 441 aa17.87■□□□□ 0.45
HLA-DQB3-203ENST00000425319 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB3-203ENST00000425319 USP32Q8NFA0 1604 aa17.86■□□□□ 0.45
HLA-DQB3-203ENST00000425319 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB3-203ENST00000425319 DLC1Q96QB1 1528 aa17.83■□□□□ 0.45
HLA-DQB3-203ENST00000425319 NUDT16Q96DE0 195 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB3-203ENST00000425319 GLI3P10071 1580 aa17.83■□□□□ 0.44
HLA-DQB3-203ENST00000425319 SPATA31A5Q5VU36 1347 aa17.82■□□□□ 0.44
HLA-DQB3-203ENST00000425319 SPATA31A7Q8IWB4 1347 aa17.82■□□□□ 0.44
HLA-DQB3-203ENST00000425319 HRCP23327 699 aa17.82■□□□□ 0.44
HLA-DQB3-203ENST00000425319 PDE3BQ13370 1112 aa17.82■□□□□ 0.44
HLA-DQB3-203ENST00000425319 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
HLA-DQB3-203ENST00000425319 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
HLA-DQB3-203ENST00000425319 STRN4Q9NRL3 753 aa17.81■□□□□ 0.44
HLA-DQB3-203ENST00000425319 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms