RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 PPP6R1Q9UPN7 881 aa6.42□□□□□ -1.38
CKS1BP6-201ENST00000424932 CDC42BPGQ6DT37 1551 aa6.42□□□□□ -1.38
CKS1BP6-201ENST00000424932 MON2Q7Z3U7 1717 aa6.42□□□□□ -1.38
CKS1BP6-201ENST00000424932 NKTRP30414 1462 aaKnown RBP6.41□□□□□ -1.38
CKS1BP6-201ENST00000424932 RAPGEF3O95398 923 aa6.41□□□□□ -1.38
CKS1BP6-201ENST00000424932 NCBP3Q53F19 620 aaKnown RBP6.41□□□□□ -1.38
CKS1BP6-201ENST00000424932 GGT6Q6P531 493 aa6.41□□□□□ -1.38
CKS1BP6-201ENST00000424932 ANP32EQ9BTT0 268 aa6.41□□□□□ -1.38
CKS1BP6-201ENST00000424932 CARD14Q9BXL6 1004 aa6.41□□□□□ -1.38
CKS1BP6-201ENST00000424932 AKAP12Q02952 1782 aa6.41□□□□□ -1.38
CKS1BP6-201ENST00000424932 ITSN1Q15811 1721 aa6.4□□□□□ -1.38
CKS1BP6-201ENST00000424932 TRMT2AQ8IZ69 625 aaKnown RBP6.4□□□□□ -1.38
CKS1BP6-201ENST00000424932 CDCA7LQ96GN5 454 aa6.4□□□□□ -1.38
CKS1BP6-201ENST00000424932 ABCC11Q96J66 1382 aa6.4□□□□□ -1.39
CKS1BP6-201ENST00000424932 A2ML1A8K2U0 1454 aa6.4□□□□□ -1.39
CKS1BP6-201ENST00000424932 COL3A1P02461 1466 aaPredicted RBP6.4□□□□□ -1.39
CKS1BP6-201ENST00000424932 NLRP1Q9C000 1473 aa6.4□□□□□ -1.39
CKS1BP6-201ENST00000424932 UBR1Q8IWV7 1749 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 CGNL1Q0VF96 1302 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 EVC2Q86UK5 1308 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 ATAD2Q6PL18 1390 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 YTHDC2Q9H6S0 1430 aaKnown RBP6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 ATP7BP35670 1465 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 CD163L1Q9NR16 1453 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 CPS1P31327 1500 aa6.39□□□□□ -1.39
CKS1BP6-201ENST00000424932 GOLGA2Q08379 1002 aa6.38□□□□□ -1.39
CKS1BP6-201ENST00000424932 SLFN5Q08AF3 891 aa6.38□□□□□ -1.39
CKS1BP6-201ENST00000424932 RIMS1Q86UR5 1692 aaKnown RBP6.38□□□□□ -1.39
CKS1BP6-201ENST00000424932 TOPAZ1Q8N9V7 1692 aa6.38□□□□□ -1.39
CKS1BP6-201ENST00000424932 TECPR2O15040 1411 aa6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 TCERG1O14776 1098 aaKnown RBP6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 CHGAP10645 457 aaKnown RBP6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 MS4A1P11836 297 aa6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 IDI1Q13907 227 aa6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 EXOC6Q8TAG9 804 aa6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 PHF23Q9BUL5 403 aaPredicted RBP6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 TRAK1Q9UPV9 953 aa6.37□□□□□ -1.39
CKS1BP6-201ENST00000424932 C3P01024 1663 aa6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 NRKQ7Z2Y5 1582 aa6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 A0A1W2PP64 1363 aa6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 E9PSI1 815 aa6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 MSH5O43196 834 aa6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 MAP2P11137 1827 aaKnown RBP6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 NALCNQ8IZF0 1738 aa6.36□□□□□ -1.39
CKS1BP6-201ENST00000424932 KDM2BQ8NHM5 1336 aa6.35□□□□□ -1.39
CKS1BP6-201ENST00000424932 CCDC27Q2M243 656 aa6.35□□□□□ -1.39
CKS1BP6-201ENST00000424932 TMEM132EQ6IEE7 984 aa6.35□□□□□ -1.39
CKS1BP6-201ENST00000424932 MORC1Q86VD1 984 aa6.35□□□□□ -1.39
CKS1BP6-201ENST00000424932 SLC12A5Q9H2X9 1139 aa6.35□□□□□ -1.39
CKS1BP6-201ENST00000424932 FAM135BQ49AJ0 1406 aa6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 RIMS2Q9UQ26 1411 aa6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 SENP3-EIF4A1A0A087X0R7 540 aa6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 APAF1O14727 1248 aa6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 RUNDC1Q96C34 613 aa6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 CFAP53Q96M91 514 aa6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 CRBNQ96SW2 442 aa6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 SALL2Q9Y467 1007 aaPredicted RBP6.34□□□□□ -1.39
CKS1BP6-201ENST00000424932 PNPLA6Q8IY17 1366 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 DLG5Q8TDM6 1919 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 FAM69CQ0P6D2 419 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 AAMPQ13685 434 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 CENPQQ7L2Z9 268 aaPredicted RBP6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 WDR63Q8IWG1 891 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 LRRC7Q96NW7 1537 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 FMN2Q9NZ56 1722 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 USP54Q70EL1 1684 aa6.33□□□□□ -1.4
CKS1BP6-201ENST00000424932 ZMYM3Q14202 1370 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 DIP2AQ14689 1571 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 FER1L4A9Z1Z3 1794 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 CYB5RLQ6IPT4 315 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 WWC1Q8IX03 1113 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 CCDC146Q8IYE0 955 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 TERF2IPQ9NYB0 399 aa6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 CDK12Q9NYV4 1490 aaPredicted RBP6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 CPSF1Q10570 1443 aaKnown RBP6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
CKS1BP6-201ENST00000424932 PLIN1O60240 522 aa6.31□□□□□ -1.4
CKS1BP6-201ENST00000424932 ANP32AP39687 249 aaKnown RBP6.31□□□□□ -1.4
CKS1BP6-201ENST00000424932 MTHFSP49914 203 aa6.31□□□□□ -1.4
CKS1BP6-201ENST00000424932 BACH2Q9BYV9 841 aa6.31□□□□□ -1.4
CKS1BP6-201ENST00000424932 SPINK5Q9NQ38 1064 aaPredicted RBP6.31□□□□□ -1.4
CKS1BP6-201ENST00000424932 RGPD1P0DJD0 1748 aa6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 XRN1Q8IZH2 1706 aaKnown RBP6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 SLIT1O75093 1534 aa6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 CT47B1P0C2W7 299 aaPredicted RBP6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 C20orf194Q5TEA3 1177 aa6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 FBXO31Q5XUX0 539 aaPredicted RBP6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 SIRT1Q96EB6 747 aa6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 PRAM1Q96QH2 718 aa6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 CABP2Q9NPB3 220 aa6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 NOP58Q9Y2X3 529 aaKnown RBP6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 PPIP5K1Q6PFW1 1433 aa6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.3□□□□□ -1.4
CKS1BP6-201ENST00000424932 IL16Q14005 1332 aa6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 PDE4AP27815 886 aa6.29□□□□□ -1.4
CKS1BP6-201ENST00000424932 SRPK2P78362 688 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms