RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 MDM2Q00987 491 aaPredicted RBP5.89□□□□□ -1.47
PMS1-209ENST00000424059 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.88□□□□□ -1.47
PMS1-209ENST00000424059 FAM187AA6NFU0 413 aa5.87□□□□□ -1.47
PMS1-209ENST00000424059 ZBTB24O43167 697 aaPredicted RBP5.87□□□□□ -1.47
PMS1-209ENST00000424059 FAM217BQ9NTX9 383 aaPredicted RBP5.87□□□□□ -1.47
PMS1-209ENST00000424059 PKD2L1Q9P0L9 805 aa5.87□□□□□ -1.47
PMS1-209ENST00000424059 HOXA2O43364 376 aa5.86□□□□□ -1.47
PMS1-209ENST00000424059 DXOO77932 396 aaKnown RBP5.86□□□□□ -1.47
PMS1-209ENST00000424059 MYT1Q01538 1121 aa5.86□□□□□ -1.47
PMS1-209ENST00000424059 ZNF787Q6DD87 383 aa5.86□□□□□ -1.47
PMS1-209ENST00000424059 RNF19BQ6ZMZ0 732 aa5.86□□□□□ -1.47
PMS1-209ENST00000424059 USB1Q9BQ65 265 aaKnown RBP5.86□□□□□ -1.47
PMS1-209ENST00000424059 TNFRSF10AO00220 468 aa5.85□□□□□ -1.47
PMS1-209ENST00000424059 CRIPAKQ8N1N5 446 aa5.85□□□□□ -1.47
PMS1-209ENST00000424059 KRI1Q8N9T8 703 aaKnown RBP5.85□□□□□ -1.47
PMS1-209ENST00000424059 PRDM9Q9NQV7 894 aa5.85□□□□□ -1.47
PMS1-209ENST00000424059 BARGINQ6ZT62 677 aa5.84□□□□□ -1.47
PMS1-209ENST00000424059 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
PMS1-209ENST00000424059 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
PMS1-209ENST00000424059 WNT7AO00755 349 aa5.84□□□□□ -1.48
PMS1-209ENST00000424059 NUTM1Q86Y26 1132 aa5.84□□□□□ -1.48
PMS1-209ENST00000424059 CYP4X1Q8N118 509 aa5.84□□□□□ -1.48
PMS1-209ENST00000424059 TOR4AQ9NXH8 423 aa5.84□□□□□ -1.48
PMS1-209ENST00000424059 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
PMS1-209ENST00000424059 AVPP01185 164 aa5.83□□□□□ -1.48
PMS1-209ENST00000424059 AMHR2Q16671 573 aa5.83□□□□□ -1.48
PMS1-209ENST00000424059 CTC1Q2NKJ3 1217 aa5.83□□□□□ -1.48
PMS1-209ENST00000424059 JUNDP17535 347 aa5.82□□□□□ -1.48
PMS1-209ENST00000424059 FOXC1Q12948 553 aa5.82□□□□□ -1.48
PMS1-209ENST00000424059 REPIN1Q9BWE0 567 aaKnown RBP5.82□□□□□ -1.48
PMS1-209ENST00000424059 ZMYND10O75800 440 aa5.82□□□□□ -1.48
PMS1-209ENST00000424059 SMCPP49901 116 aaPredicted RBP5.82□□□□□ -1.48
PMS1-209ENST00000424059 RETREG3Q86VR2 466 aa5.82□□□□□ -1.48
PMS1-209ENST00000424059 TRIM32Q13049 653 aa5.81□□□□□ -1.48
PMS1-209ENST00000424059 WNT7BP56706 349 aa5.81□□□□□ -1.48
PMS1-209ENST00000424059 DIXDC1Q155Q3 683 aa5.8□□□□□ -1.48
PMS1-209ENST00000424059 SNIP1Q8TAD8 396 aaKnown RBP5.8□□□□□ -1.48
PMS1-209ENST00000424059 AAASQ9NRG9 546 aa5.8□□□□□ -1.48
PMS1-209ENST00000424059 GJA5P36382 358 aa5.79□□□□□ -1.48
PMS1-209ENST00000424059 FDX1P10109 184 aa5.79□□□□□ -1.48
PMS1-209ENST00000424059 SSTR3P32745 418 aaPredicted RBP5.79□□□□□ -1.48
PMS1-209ENST00000424059 TTC24A2A3L6 582 aaPredicted RBP5.78□□□□□ -1.48
PMS1-209ENST00000424059 ZC3H15Q8WU90 426 aaKnown RBP5.78□□□□□ -1.48
PMS1-209ENST00000424059 SPDYE5A6NIY4 337 aa5.77□□□□□ -1.49
PMS1-209ENST00000424059 TTLL12Q14166 644 aaPredicted RBP5.77□□□□□ -1.49
PMS1-209ENST00000424059 HLA-CQ95604 372 aa5.77□□□□□ -1.49
PMS1-209ENST00000424059 BTBD11A6QL63 1104 aa5.77□□□□□ -1.49
PMS1-209ENST00000424059 AXIN1O15169 862 aa5.77□□□□□ -1.49
PMS1-209ENST00000424059 SPIRE2Q8WWL2 714 aa5.77□□□□□ -1.49
PMS1-209ENST00000424059 GUCA2AQ02747 115 aa5.76□□□□□ -1.49
PMS1-209ENST00000424059 CCDC24Q8N4L8 307 aa5.76□□□□□ -1.49
PMS1-209ENST00000424059 NUDT12Q9BQG2 462 aa5.76□□□□□ -1.49
PMS1-209ENST00000424059 ST8SIA5O15466 376 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 MS4A1P11836 297 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 PTPRNQ16849 979 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 DESI1Q6ICB0 168 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 GIGYF2Q6Y7W6 1299 aaKnown RBP5.75□□□□□ -1.49
PMS1-209ENST00000424059 ZNF775Q96BV0 537 aaPredicted RBP5.75□□□□□ -1.49
PMS1-209ENST00000424059 C6orf229H3BNL8 230 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 CCNYL3P0C7X3 344 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 SMPD1P17405 629 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 RC3H1Q5TC82 1133 aaKnown RBP5.75□□□□□ -1.49
PMS1-209ENST00000424059 MRGPRX2Q96LB1 330 aa5.75□□□□□ -1.49
PMS1-209ENST00000424059 AK7Q96M32 723 aa5.74□□□□□ -1.49
PMS1-209ENST00000424059 STK17AQ9UEE5 414 aa5.74□□□□□ -1.49
PMS1-209ENST00000424059 PCDHGC3Q9UN70 934 aa5.74□□□□□ -1.49
PMS1-209ENST00000424059 MTMR2Q13614 643 aa5.73□□□□□ -1.49
PMS1-209ENST00000424059 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 MOXD2PA6NHM9 499 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 SKOR1P84550 965 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 SYMPKQ92797 1274 aaKnown RBP5.72□□□□□ -1.49
PMS1-209ENST00000424059 BEGAINQ9BUH8 593 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 SENP2Q9HC62 589 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 TRIM66O15016 1216 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 SPTLC1O15269 473 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 PARP9Q8IXQ6 854 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 TBC1D2Q9BYX2 928 aa5.72□□□□□ -1.49
PMS1-209ENST00000424059 KCNH2Q12809 1159 aa5.71□□□□□ -1.5
PMS1-209ENST00000424059 TUSC1Q2TAM9 212 aa5.71□□□□□ -1.5
PMS1-209ENST00000424059 PRPF38BQ5VTL8 546 aaKnown RBP5.71□□□□□ -1.5
PMS1-209ENST00000424059 RSBN1LQ6PCB5 846 aaPredicted RBP5.71□□□□□ -1.5
PMS1-209ENST00000424059 PRR7Q8TB68 274 aa5.71□□□□□ -1.5
PMS1-209ENST00000424059 KIFC2Q96AC6 838 aa5.71□□□□□ -1.5
PMS1-209ENST00000424059 EVA1BQ9NVM1 165 aa5.71□□□□□ -1.5
PMS1-209ENST00000424059 POTECB2RU33 542 aa5.7□□□□□ -1.5
PMS1-209ENST00000424059 NDUFV2P19404 249 aa5.7□□□□□ -1.5
PMS1-209ENST00000424059 MPNDQ8N594 471 aa5.7□□□□□ -1.5
PMS1-209ENST00000424059 J3QL48 77 aa5.7□□□□□ -1.5
PMS1-209ENST00000424059 TREML4Q6UXN2 200 aa5.7□□□□□ -1.5
PMS1-209ENST00000424059 EHBP1Q8NDI1 1231 aa5.7□□□□□ -1.5
PMS1-209ENST00000424059 ATP13A2Q9NQ11 1180 aa5.7□□□□□ -1.5
PMS1-209ENST00000424059 GMPR2Q9P2T1 348 aaKnown RBP5.7□□□□□ -1.5
PMS1-209ENST00000424059 C11orf95C9JLR9 678 aaPredicted RBP5.69□□□□□ -1.5
PMS1-209ENST00000424059 SIAH2O43255 324 aa5.69□□□□□ -1.5
PMS1-209ENST00000424059 PTCRAQ6ISU1 281 aaPredicted RBP5.69□□□□□ -1.5
PMS1-209ENST00000424059 UNC93B1Q9H1C4 597 aa5.69□□□□□ -1.5
PMS1-209ENST00000424059 ZBTB3Q9H5J0 574 aa5.69□□□□□ -1.5
PMS1-209ENST00000424059 LYPD8Q6UX82 237 aa5.69□□□□□ -1.5
PMS1-209ENST00000424059 DACH1Q9UI36 760 aa5.69□□□□□ -1.5
PMS1-209ENST00000424059 SH3BP2P78314 561 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms