RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 CLTCL1P53675 1640 aa21.11■□□□□ 0.97
NPC1L1-203ENST00000423141 MRE11P49959 708 aa21.11■□□□□ 0.97
NPC1L1-203ENST00000423141 ERBB4Q15303 1308 aa21.11■□□□□ 0.97
NPC1L1-203ENST00000423141 SHPRHQ149N8 1683 aa21.11■□□□□ 0.97
NPC1L1-203ENST00000423141 PHF23Q9BUL5 403 aaPredicted RBP21.11■□□□□ 0.97
NPC1L1-203ENST00000423141 TRPM2O94759 1503 aa21.1■□□□□ 0.97
NPC1L1-203ENST00000423141 MVPQ14764 893 aaKnown RBP21.1■□□□□ 0.97
NPC1L1-203ENST00000423141 ZNF692Q9BU19 519 aaPredicted RBP21.1■□□□□ 0.97
NPC1L1-203ENST00000423141 GRPEL1Q9HAV7 217 aa21.1■□□□□ 0.97
NPC1L1-203ENST00000423141 IQSEC2Q5JU85 1478 aa21.1■□□□□ 0.97
NPC1L1-203ENST00000423141 MORC1Q86VD1 984 aa21.08■□□□□ 0.97
NPC1L1-203ENST00000423141 HSP90AA1P07900 732 aaKnown RBP21.07■□□□□ 0.96
NPC1L1-203ENST00000423141 HSP90AA2PQ14568 343 aaPredicted RBP21.07■□□□□ 0.96
NPC1L1-203ENST00000423141 WDR63Q8IWG1 891 aa21.07■□□□□ 0.96
NPC1L1-203ENST00000423141 MYH16Q9H6N6 1097 aa21.07■□□□□ 0.96
NPC1L1-203ENST00000423141 PKNOX2Q96KN3 472 aa21.06■□□□□ 0.96
NPC1L1-203ENST00000423141 ADGRF5Q8IZF2 1346 aa21.05■□□□□ 0.96
NPC1L1-203ENST00000423141 HSCBQ8IWL3 235 aa21.05■□□□□ 0.96
NPC1L1-203ENST00000423141 FTSJ3Q8IY81 847 aaKnown RBP21.05■□□□□ 0.96
NPC1L1-203ENST00000423141 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
NPC1L1-203ENST00000423141 PTPRTO14522 1441 aa21.05■□□□□ 0.96
NPC1L1-203ENST00000423141 NSD3Q9BZ95 1437 aa21.05■□□□□ 0.96
NPC1L1-203ENST00000423141 ESPNB1AK53 854 aa21.05■□□□□ 0.96
NPC1L1-203ENST00000423141 TRAPPC8Q9Y2L5 1435 aa21.04■□□□□ 0.96
NPC1L1-203ENST00000423141 GLIPR1L2Q4G1C9 344 aa21.04■□□□□ 0.96
NPC1L1-203ENST00000423141 ZKSCAN2Q63HK3 967 aa21.04■□□□□ 0.96
NPC1L1-203ENST00000423141 GAS2L3Q86XJ1 694 aa21.04■□□□□ 0.96
NPC1L1-203ENST00000423141 DZIP1LQ8IYY4 767 aaKnown RBP21.04■□□□□ 0.96
NPC1L1-203ENST00000423141 DDX11L8A8MPP1 907 aa21.03■□□□□ 0.96
NPC1L1-203ENST00000423141 STAC3Q96MF2 364 aa21.03■□□□□ 0.96
NPC1L1-203ENST00000423141 TSR2Q969E8 191 aaKnown RBP21.03■□□□□ 0.96
NPC1L1-203ENST00000423141 DDIT3P35638 169 aa21.02■□□□□ 0.96
NPC1L1-203ENST00000423141 SLC12A5Q9H2X9 1139 aa21.02■□□□□ 0.96
NPC1L1-203ENST00000423141 MTHFSP49914 203 aa21.01■□□□□ 0.95
NPC1L1-203ENST00000423141 TNPO1Q92973 898 aaKnown RBP21.01■□□□□ 0.95
NPC1L1-203ENST00000423141 ABCA6Q8N139 1617 aa21■□□□□ 0.95
NPC1L1-203ENST00000423141 NCOA3Q9Y6Q9 1424 aa21■□□□□ 0.95
NPC1L1-203ENST00000423141 RRP9O43818 475 aaKnown RBP21■□□□□ 0.95
NPC1L1-203ENST00000423141 ZMYND15Q9H091 742 aa21■□□□□ 0.95
NPC1L1-203ENST00000423141 TRIM27P14373 513 aa20.99■□□□□ 0.95
NPC1L1-203ENST00000423141 UGGT1Q9NYU2 1555 aa20.99■□□□□ 0.95
NPC1L1-203ENST00000423141 ITPRIPQ8IWB1 547 aa20.99■□□□□ 0.95
NPC1L1-203ENST00000423141 KIAA1210Q9ULL0 1709 aa20.99■□□□□ 0.95
NPC1L1-203ENST00000423141 CCDC27Q2M243 656 aa20.98■□□□□ 0.95
NPC1L1-203ENST00000423141 AFAP1Q8N556 730 aa20.98■□□□□ 0.95
NPC1L1-203ENST00000423141 SMC4Q9NTJ3 1288 aa20.98■□□□□ 0.95
NPC1L1-203ENST00000423141 KANK1Q14678 1352 aa20.98■□□□□ 0.95
NPC1L1-203ENST00000423141 HDAC1Q13547 482 aaPredicted RBP20.97■□□□□ 0.95
NPC1L1-203ENST00000423141 ZNF518AQ6AHZ1 1483 aa20.96■□□□□ 0.95
NPC1L1-203ENST00000423141 MAP3K4Q9Y6R4 1608 aa20.96■□□□□ 0.95
NPC1L1-203ENST00000423141 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.95
NPC1L1-203ENST00000423141 SPAG9O60271 1321 aaKnown RBP20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 SLC24A1O60721 1099 aa20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 U2AF1L5P0DN76 240 aaPredicted RBP20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 U2AF1Q01081 240 aaKnown RBP eCLIP20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 EXOSC9Q06265 439 aaKnown RBP20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 EFCAB2Q5VUJ9 269 aa20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 SSH1Q8WYL5 1049 aa20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 TRIM44Q96DX7 344 aaPredicted RBP20.95■□□□□ 0.94
NPC1L1-203ENST00000423141 PLCH2O75038 1416 aa20.94■□□□□ 0.94
NPC1L1-203ENST00000423141 SMC5Q8IY18 1101 aa20.94■□□□□ 0.94
NPC1L1-203ENST00000423141 RBM25P49756 843 aaKnown RBP20.93■□□□□ 0.94
NPC1L1-203ENST00000423141 ABCC1P33527 1531 aa20.93■□□□□ 0.94
NPC1L1-203ENST00000423141 ISY1Q9ULR0 285 aaKnown RBP20.93■□□□□ 0.94
NPC1L1-203ENST00000423141 TRAK1Q9UPV9 953 aa20.93■□□□□ 0.94
NPC1L1-203ENST00000423141 CD2BP2O95400 341 aaKnown RBP20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 SNX21Q969T3 373 aa20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 DDX19BQ9UMR2 479 aa20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 RAB3GAP1Q15042 981 aa20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 TMEM57Q8N5G2 664 aa20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 NOB1Q9ULX3 412 aaKnown RBP20.92■□□□□ 0.94
NPC1L1-203ENST00000423141 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
NPC1L1-203ENST00000423141 ATF7IPQ6VMQ6 1270 aa20.91■□□□□ 0.94
NPC1L1-203ENST00000423141 MYOM2P54296 1465 aa20.9■□□□□ 0.94
NPC1L1-203ENST00000423141 TET3O43151 1660 aa20.9■□□□□ 0.94
NPC1L1-203ENST00000423141 SBNO2Q9Y2G9 1366 aa20.9■□□□□ 0.94
NPC1L1-203ENST00000423141 KIF2CQ99661 725 aa20.9■□□□□ 0.94
NPC1L1-203ENST00000423141 GBP4Q96PP9 640 aa20.89■□□□□ 0.93
NPC1L1-203ENST00000423141 SHROOM2Q13796 1616 aa20.89■□□□□ 0.93
NPC1L1-203ENST00000423141 ZBTB40Q9NUA8 1239 aa20.88■□□□□ 0.93
NPC1L1-203ENST00000423141 ZFYVE16Q7Z3T8 1539 aa20.87■□□□□ 0.93
NPC1L1-203ENST00000423141 NUCB1Q02818 461 aa20.87■□□□□ 0.93
NPC1L1-203ENST00000423141 MYO3AQ8NEV4 1616 aa20.87■□□□□ 0.93
NPC1L1-203ENST00000423141 KIF3BO15066 747 aa20.87■□□□□ 0.93
NPC1L1-203ENST00000423141 RBM42Q9BTD8 480 aaKnown RBP20.87■□□□□ 0.93
NPC1L1-203ENST00000423141 CIZ1Q9ULV3 898 aaPredicted RBP20.87■□□□□ 0.93
NPC1L1-203ENST00000423141 DEPDC5O75140 1603 aa20.86■□□□□ 0.93
NPC1L1-203ENST00000423141 CD109Q6YHK3 1445 aa20.86■□□□□ 0.93
NPC1L1-203ENST00000423141 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
NPC1L1-203ENST00000423141 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
NPC1L1-203ENST00000423141 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
NPC1L1-203ENST00000423141 SSFA2P28290 1259 aa20.85■□□□□ 0.93
NPC1L1-203ENST00000423141 TMEM132EQ6IEE7 984 aa20.85■□□□□ 0.93
NPC1L1-203ENST00000423141 SKOR2Q2VWA4 1001 aaPredicted RBP20.84■□□□□ 0.93
NPC1L1-203ENST00000423141 CHD1LQ86WJ1 897 aa20.84■□□□□ 0.93
NPC1L1-203ENST00000423141 NOS1P29475 1434 aa20.83■□□□□ 0.93
NPC1L1-203ENST00000423141 MROH2AA6NES4 1674 aa20.83■□□□□ 0.92
NPC1L1-203ENST00000423141 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms