RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 GJA5P36382 358 aa13.06□□□□□ -0.32
TRPS1-204ENST00000422939 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
TRPS1-204ENST00000422939 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
TRPS1-204ENST00000422939 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
TRPS1-204ENST00000422939 PRDM9Q9NQV7 894 aa13.04□□□□□ -0.32
TRPS1-204ENST00000422939 RSBN1LQ6PCB5 846 aaPredicted RBP13.03□□□□□ -0.32
TRPS1-204ENST00000422939 SPTLC1O15269 473 aa13.02□□□□□ -0.33
TRPS1-204ENST00000422939 MMP16P51512 607 aa13.02□□□□□ -0.33
TRPS1-204ENST00000422939 RETREG3Q86VR2 466 aa13.02□□□□□ -0.33
TRPS1-204ENST00000422939 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
TRPS1-204ENST00000422939 SLC19A1P41440 591 aa13.01□□□□□ -0.33
TRPS1-204ENST00000422939 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
TRPS1-204ENST00000422939 EMID1Q96A84 441 aaPredicted RBP13.01□□□□□ -0.33
TRPS1-204ENST00000422939 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
TRPS1-204ENST00000422939 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
TRPS1-204ENST00000422939 DXOO77932 396 aaKnown RBP12.99□□□□□ -0.33
TRPS1-204ENST00000422939 PLA2G2CQ5R387 149 aa12.99□□□□□ -0.33
TRPS1-204ENST00000422939 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
TRPS1-204ENST00000422939 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
TRPS1-204ENST00000422939 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
TRPS1-204ENST00000422939 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
TRPS1-204ENST00000422939 MTMR2Q13614 643 aa12.97□□□□□ -0.33
TRPS1-204ENST00000422939 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
TRPS1-204ENST00000422939 FAM117AQ9C073 453 aa12.97□□□□□ -0.33
TRPS1-204ENST00000422939 IRX2Q9BZI1 471 aaPredicted RBP12.96□□□□□ -0.33
TRPS1-204ENST00000422939 JUNDP17535 347 aa12.95□□□□□ -0.34
TRPS1-204ENST00000422939 TUSC1Q2TAM9 212 aa12.95□□□□□ -0.34
TRPS1-204ENST00000422939 SPRYD7Q5W111 196 aa12.95□□□□□ -0.34
TRPS1-204ENST00000422939 LIMD1Q9UGP4 676 aa12.95□□□□□ -0.34
TRPS1-204ENST00000422939 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
TRPS1-204ENST00000422939 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
TRPS1-204ENST00000422939 RPIAP49247 311 aa12.93□□□□□ -0.34
TRPS1-204ENST00000422939 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
TRPS1-204ENST00000422939 HRCP23327 699 aa12.92□□□□□ -0.34
TRPS1-204ENST00000422939 ZNF598Q86UK7 904 aaKnown RBP12.92□□□□□ -0.34
TRPS1-204ENST00000422939 PRR7Q8TB68 274 aa12.92□□□□□ -0.34
TRPS1-204ENST00000422939 CLK2P49760 499 aaKnown RBP12.91□□□□□ -0.34
TRPS1-204ENST00000422939 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
TRPS1-204ENST00000422939 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
TRPS1-204ENST00000422939 CSPP1Q1MSJ5 1256 aa12.9□□□□□ -0.34
TRPS1-204ENST00000422939 DESI1Q6ICB0 168 aa12.9□□□□□ -0.34
TRPS1-204ENST00000422939 ZBTB24O43167 697 aaPredicted RBP12.89□□□□□ -0.35
TRPS1-204ENST00000422939 CD2BP2O95400 341 aaKnown RBP12.89□□□□□ -0.35
TRPS1-204ENST00000422939 BRPF1P55201 1214 aaPredicted RBP12.89□□□□□ -0.35
TRPS1-204ENST00000422939 LILRB3O75022 631 aa12.88□□□□□ -0.35
TRPS1-204ENST00000422939 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
TRPS1-204ENST00000422939 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
TRPS1-204ENST00000422939 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
TRPS1-204ENST00000422939 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
TRPS1-204ENST00000422939 ZNF697Q5TEC3 545 aa12.87□□□□□ -0.35
TRPS1-204ENST00000422939 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
TRPS1-204ENST00000422939 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
TRPS1-204ENST00000422939 GFRA3O60609 400 aa12.86□□□□□ -0.35
TRPS1-204ENST00000422939 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
TRPS1-204ENST00000422939 LAPTM4AQ15012 233 aa12.86□□□□□ -0.35
TRPS1-204ENST00000422939 QPCTQ16769 361 aa12.86□□□□□ -0.35
TRPS1-204ENST00000422939 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
TRPS1-204ENST00000422939 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
TRPS1-204ENST00000422939 NUDT12Q9BQG2 462 aa12.86□□□□□ -0.35
TRPS1-204ENST00000422939 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
TRPS1-204ENST00000422939 PTPRNQ16849 979 aa12.85□□□□□ -0.35
TRPS1-204ENST00000422939 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
TRPS1-204ENST00000422939 CCNYL3P0C7X3 344 aa12.82□□□□□ -0.36
TRPS1-204ENST00000422939 TRIM67Q6ZTA4 783 aa12.82□□□□□ -0.36
TRPS1-204ENST00000422939 EVA1BQ9NVM1 165 aa12.82□□□□□ -0.36
TRPS1-204ENST00000422939 TRIM32Q13049 653 aa12.81□□□□□ -0.36
TRPS1-204ENST00000422939 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
TRPS1-204ENST00000422939 LYPD8Q6UX82 237 aa12.81□□□□□ -0.36
TRPS1-204ENST00000422939 IL27Q8NEV9 243 aa12.81□□□□□ -0.36
TRPS1-204ENST00000422939 PRR20EP86478 221 aa12.8□□□□□ -0.36
TRPS1-204ENST00000422939 PRR20CP86479 221 aa12.8□□□□□ -0.36
TRPS1-204ENST00000422939 PRR20DP86480 221 aa12.8□□□□□ -0.36
TRPS1-204ENST00000422939 PRR20BP86481 221 aa12.8□□□□□ -0.36
TRPS1-204ENST00000422939 PRR20AP86496 221 aa12.8□□□□□ -0.36
TRPS1-204ENST00000422939 PROCA1Q8NCQ7 364 aaPredicted RBP12.8□□□□□ -0.36
TRPS1-204ENST00000422939 NRG2O14511 850 aaPredicted RBP12.79□□□□□ -0.36
TRPS1-204ENST00000422939 GDF9O60383 454 aa12.79□□□□□ -0.36
TRPS1-204ENST00000422939 PTCRAQ6ISU1 281 aaPredicted RBP12.79□□□□□ -0.36
TRPS1-204ENST00000422939 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRPS1-204ENST00000422939 GOPCQ9HD26 462 aa12.79□□□□□ -0.36
TRPS1-204ENST00000422939 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
TRPS1-204ENST00000422939 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
TRPS1-204ENST00000422939 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
TRPS1-204ENST00000422939 TSC1Q92574 1164 aa12.76□□□□□ -0.37
TRPS1-204ENST00000422939 FOXC1Q12948 553 aa12.75□□□□□ -0.37
TRPS1-204ENST00000422939 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
TRPS1-204ENST00000422939 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
TRPS1-204ENST00000422939 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
TRPS1-204ENST00000422939 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
TRPS1-204ENST00000422939 UNC93B1Q9H1C4 597 aa12.73□□□□□ -0.37
TRPS1-204ENST00000422939 WNT7BP56706 349 aa12.72□□□□□ -0.37
TRPS1-204ENST00000422939 FBXO31Q5XUX0 539 aaPredicted RBP12.72□□□□□ -0.37
TRPS1-204ENST00000422939 Q6ZNB5 142 aa12.72□□□□□ -0.37
TRPS1-204ENST00000422939 WNT7AO00755 349 aa12.71□□□□□ -0.37
TRPS1-204ENST00000422939 F12P00748 615 aaPredicted RBP12.71□□□□□ -0.37
TRPS1-204ENST00000422939 CTHP32929 405 aa12.71□□□□□ -0.37
TRPS1-204ENST00000422939 PCMTD1Q96MG8 357 aaPredicted RBP12.71□□□□□ -0.37
TRPS1-204ENST00000422939 SKOR1P84550 965 aa12.7□□□□□ -0.38
TRPS1-204ENST00000422939 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
TRPS1-204ENST00000422939 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms