RNA–Protein interactions for RNA: ENST00000422788.5

CCDC66-205, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-205ENST00000422788 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
CCDC66-205ENST00000422788 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
CCDC66-205ENST00000422788 WNT7AO00755 349 aa9.99□□□□□ -0.81
CCDC66-205ENST00000422788 AXIN1O15169 862 aa9.99□□□□□ -0.81
CCDC66-205ENST00000422788 DACH1Q9UI36 760 aa9.99□□□□□ -0.81
CCDC66-205ENST00000422788 MAP2K5Q13163 448 aa9.98□□□□□ -0.81
CCDC66-205ENST00000422788 TRIM32Q13049 653 aa9.97□□□□□ -0.81
CCDC66-205ENST00000422788 KDM4AO75164 1064 aa9.96□□□□□ -0.82
CCDC66-205ENST00000422788 DXOO77932 396 aaKnown RBP9.96□□□□□ -0.82
CCDC66-205ENST00000422788 USB1Q9BQ65 265 aaKnown RBP9.96□□□□□ -0.82
CCDC66-205ENST00000422788 TTC24A2A3L6 582 aaPredicted RBP9.95□□□□□ -0.82
CCDC66-205ENST00000422788 IRF6O14896 467 aa9.95□□□□□ -0.82
CCDC66-205ENST00000422788 SNIP1Q8TAD8 396 aaKnown RBP9.95□□□□□ -0.82
CCDC66-205ENST00000422788 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
CCDC66-205ENST00000422788 SMPD1P17405 629 aa9.94□□□□□ -0.82
CCDC66-205ENST00000422788 USP46P62068 366 aa9.94□□□□□ -0.82
CCDC66-205ENST00000422788 KDM2AQ9Y2K7 1162 aa9.93□□□□□ -0.82
CCDC66-205ENST00000422788 C11orf95C9JLR9 678 aaPredicted RBP9.92□□□□□ -0.82
CCDC66-205ENST00000422788 MRGPRX2Q96LB1 330 aa9.92□□□□□ -0.82
CCDC66-205ENST00000422788 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
CCDC66-205ENST00000422788 REPIN1Q9BWE0 567 aaKnown RBP9.91□□□□□ -0.82
CCDC66-205ENST00000422788 HOXA2O43364 376 aa9.89□□□□□ -0.83
CCDC66-205ENST00000422788 MDM2Q00987 491 aaPredicted RBP9.89□□□□□ -0.83
CCDC66-205ENST00000422788 J3QL48 77 aa9.88□□□□□ -0.83
CCDC66-205ENST00000422788 HLA-CQ95604 372 aa9.88□□□□□ -0.83
CCDC66-205ENST00000422788 WFS1O76024 890 aa9.87□□□□□ -0.83
CCDC66-205ENST00000422788 WNT7BP56706 349 aa9.87□□□□□ -0.83
CCDC66-205ENST00000422788 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
CCDC66-205ENST00000422788 ATP13A2Q9NQ11 1180 aa9.87□□□□□ -0.83
CCDC66-205ENST00000422788 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-205ENST00000422788 HAP1P54257 671 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-205ENST00000422788 SKOR1P84550 965 aa9.85□□□□□ -0.83
CCDC66-205ENST00000422788 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
CCDC66-205ENST00000422788 WIPF1O43516 503 aa9.84□□□□□ -0.83
CCDC66-205ENST00000422788 CLCN1P35523 988 aa9.84□□□□□ -0.83
CCDC66-205ENST00000422788 RC3H1Q5TC82 1133 aaKnown RBP9.84□□□□□ -0.83
CCDC66-205ENST00000422788 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
CCDC66-205ENST00000422788 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
CCDC66-205ENST00000422788 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-205ENST00000422788 JUNDP17535 347 aa9.83□□□□□ -0.84
CCDC66-205ENST00000422788 HPS1Q92902 700 aa9.83□□□□□ -0.84
CCDC66-205ENST00000422788 SENP2Q9HC62 589 aa9.83□□□□□ -0.84
CCDC66-205ENST00000422788 CCDC24Q8N4L8 307 aa9.82□□□□□ -0.84
CCDC66-205ENST00000422788 SNRPBP14678 240 aaKnown RBP9.81□□□□□ -0.84
CCDC66-205ENST00000422788 RETREG3Q86VR2 466 aa9.81□□□□□ -0.84
CCDC66-205ENST00000422788 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
CCDC66-205ENST00000422788 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
CCDC66-205ENST00000422788 SIAH2O43255 324 aa9.78□□□□□ -0.84
CCDC66-205ENST00000422788 SYMPKQ92797 1274 aaKnown RBP9.78□□□□□ -0.84
CCDC66-205ENST00000422788 TERTO14746 1132 aaKnown RBP9.77□□□□□ -0.85
CCDC66-205ENST00000422788 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
CCDC66-205ENST00000422788 NUTM1Q86Y26 1132 aa9.77□□□□□ -0.85
CCDC66-205ENST00000422788 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
CCDC66-205ENST00000422788 NUDT12Q9BQG2 462 aa9.77□□□□□ -0.85
CCDC66-205ENST00000422788 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
CCDC66-205ENST00000422788 STK17AQ9UEE5 414 aa9.76□□□□□ -0.85
CCDC66-205ENST00000422788 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
CCDC66-205ENST00000422788 PCDHGC3Q9UN70 934 aa9.75□□□□□ -0.85
CCDC66-205ENST00000422788 ALDH1A1P00352 501 aa9.74□□□□□ -0.85
CCDC66-205ENST00000422788 FDX1P10109 184 aa9.74□□□□□ -0.85
CCDC66-205ENST00000422788 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
CCDC66-205ENST00000422788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCDC66-205ENST00000422788 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
CCDC66-205ENST00000422788 MS4A1P11836 297 aa9.71□□□□□ -0.86
CCDC66-205ENST00000422788 SH3BP2P78314 561 aa9.71□□□□□ -0.86
CCDC66-205ENST00000422788 EHBP1Q8NDI1 1231 aa9.71□□□□□ -0.86
CCDC66-205ENST00000422788 SPIRE2Q8WWL2 714 aa9.71□□□□□ -0.86
CCDC66-205ENST00000422788 EVA1BQ9NVM1 165 aa9.71□□□□□ -0.86
CCDC66-205ENST00000422788 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
CCDC66-205ENST00000422788 SSTR3P32745 418 aaPredicted RBP9.7□□□□□ -0.86
CCDC66-205ENST00000422788 PTPRNQ16849 979 aa9.7□□□□□ -0.86
CCDC66-205ENST00000422788 DESI1Q6ICB0 168 aa9.68□□□□□ -0.86
CCDC66-205ENST00000422788 MPNDQ8N594 471 aa9.68□□□□□ -0.86
CCDC66-205ENST00000422788 CAPN5O15484 640 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-205ENST00000422788 TRIM46Q7Z4K8 759 aa9.67□□□□□ -0.86
CCDC66-205ENST00000422788 NPAS3Q8IXF0 933 aa9.67□□□□□ -0.86
CCDC66-205ENST00000422788 UNC93B1Q9H1C4 597 aa9.67□□□□□ -0.86
CCDC66-205ENST00000422788 WASF2Q9Y6W5 498 aa9.67□□□□□ -0.86
CCDC66-205ENST00000422788 SPDYE5A6NIY4 337 aa9.66□□□□□ -0.86
CCDC66-205ENST00000422788 NXF1Q9UBU9 619 aaKnown RBP9.66□□□□□ -0.86
CCDC66-205ENST00000422788 MOXD2PA6NHM9 499 aa9.65□□□□□ -0.86
CCDC66-205ENST00000422788 GJA5P36382 358 aa9.65□□□□□ -0.86
CCDC66-205ENST00000422788 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
CCDC66-205ENST00000422788 AMHR2Q16671 573 aa9.65□□□□□ -0.86
CCDC66-205ENST00000422788 BARGINQ6ZT62 677 aa9.65□□□□□ -0.86
CCDC66-205ENST00000422788 NDUFV2P19404 249 aa9.64□□□□□ -0.87
CCDC66-205ENST00000422788 ZMYND10O75800 440 aa9.63□□□□□ -0.87
CCDC66-205ENST00000422788 BMP1P13497 986 aa9.63□□□□□ -0.87
CCDC66-205ENST00000422788 MTMR2Q13614 643 aa9.63□□□□□ -0.87
CCDC66-205ENST00000422788 ZNF511Q8NB15 262 aa9.63□□□□□ -0.87
CCDC66-205ENST00000422788 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
CCDC66-205ENST00000422788 SLC16A10Q8TF71 515 aa9.63□□□□□ -0.87
CCDC66-205ENST00000422788 BAP1Q92560 729 aa9.63□□□□□ -0.87
CCDC66-205ENST00000422788 PLEKHG3A1L390 1219 aa9.62□□□□□ -0.87
CCDC66-205ENST00000422788 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
CCDC66-205ENST00000422788 TTLL12Q14166 644 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-205ENST00000422788 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
CCDC66-205ENST00000422788 GIGYF2Q6Y7W6 1299 aaKnown RBP9.59□□□□□ -0.87
CCDC66-205ENST00000422788 IRF7Q92985 503 aa9.59□□□□□ -0.87
CCDC66-205ENST00000422788 H3BM21 787 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms