RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
CCR9-204ENST00000422395 TRIM52Q96A61 297 aa9.4□□□□□ -0.9
CCR9-204ENST00000422395 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
CCR9-204ENST00000422395 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
CCR9-204ENST00000422395 AKNAQ7Z591 1439 aa9.39□□□□□ -0.91
CCR9-204ENST00000422395 PPP1R15BQ5SWA1 713 aa9.39□□□□□ -0.91
CCR9-204ENST00000422395 WNT2BQ93097 391 aa9.39□□□□□ -0.91
CCR9-204ENST00000422395 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
CCR9-204ENST00000422395 ZFYVE16Q7Z3T8 1539 aa9.39□□□□□ -0.91
CCR9-204ENST00000422395 TONSLQ96HA7 1378 aa9.39□□□□□ -0.91
CCR9-204ENST00000422395 PCF11O94913 1555 aaKnown RBP9.39□□□□□ -0.91
CCR9-204ENST00000422395 SIGLEC1Q9BZZ2 1709 aa9.38□□□□□ -0.91
CCR9-204ENST00000422395 KIF14Q15058 1648 aa9.38□□□□□ -0.91
CCR9-204ENST00000422395 FMN1Q68DA7 1419 aa9.38□□□□□ -0.91
CCR9-204ENST00000422395 LRRIQ1Q96JM4 1722 aa9.37□□□□□ -0.91
CCR9-204ENST00000422395 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCR9-204ENST00000422395 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
CCR9-204ENST00000422395 LRRC9Q6ZRR7 1453 aa9.37□□□□□ -0.91
CCR9-204ENST00000422395 ARHGAP35Q9NRY4 1499 aa9.37□□□□□ -0.91
CCR9-204ENST00000422395 RGS20O76081 388 aa9.36□□□□□ -0.91
CCR9-204ENST00000422395 PDE4AP27815 886 aa9.36□□□□□ -0.91
CCR9-204ENST00000422395 THSD4Q6ZMP0 1018 aa9.36□□□□□ -0.91
CCR9-204ENST00000422395 IPO9Q96P70 1041 aaKnown RBP9.36□□□□□ -0.91
CCR9-204ENST00000422395 IRX2Q9BZI1 471 aaPredicted RBP9.36□□□□□ -0.91
CCR9-204ENST00000422395 ZBED9Q6R2W3 1325 aa9.36□□□□□ -0.91
CCR9-204ENST00000422395 POGZQ7Z3K3 1410 aa9.36□□□□□ -0.91
CCR9-204ENST00000422395 MAGI2Q86UL8 1455 aa9.36□□□□□ -0.91
CCR9-204ENST00000422395 LMTK3Q96Q04 1460 aa9.35□□□□□ -0.91
CCR9-204ENST00000422395 FOSBP53539 338 aa9.34□□□□□ -0.91
CCR9-204ENST00000422395 VSIG10Q8N0Z9 540 aa9.34□□□□□ -0.91
CCR9-204ENST00000422395 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
CCR9-204ENST00000422395 PLCH2O75038 1416 aa9.34□□□□□ -0.91
CCR9-204ENST00000422395 YEATS2Q9ULM3 1422 aa9.34□□□□□ -0.91
CCR9-204ENST00000422395 C11orf95C9JLR9 678 aaPredicted RBP9.33□□□□□ -0.92
CCR9-204ENST00000422395 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
CCR9-204ENST00000422395 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
CCR9-204ENST00000422395 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
CCR9-204ENST00000422395 PPM1GO15355 546 aaPredicted RBP9.32□□□□□ -0.92
CCR9-204ENST00000422395 ARHGAP5Q13017 1502 aa9.32□□□□□ -0.92
CCR9-204ENST00000422395 NCOA2Q15596 1464 aa9.32□□□□□ -0.92
CCR9-204ENST00000422395 SCAPERQ9BY12 1400 aa9.32□□□□□ -0.92
CCR9-204ENST00000422395 CRISPLD2Q9H0B8 497 aa9.32□□□□□ -0.92
CCR9-204ENST00000422395 CDC42BPBQ9Y5S2 1711 aa9.32□□□□□ -0.92
CCR9-204ENST00000422395 EVI5O60447 810 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 UBE2Q2Q8WVN8 375 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 PREX1Q8TCU6 1659 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 PREX2Q70Z35 1606 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 ZNF518AQ6AHZ1 1483 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 TROQ12816 1431 aaPredicted RBP9.31□□□□□ -0.92
CCR9-204ENST00000422395 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
CCR9-204ENST00000422395 KDM5CP41229 1560 aa9.3□□□□□ -0.92
CCR9-204ENST00000422395 C9orf84Q5VXU9 1444 aa9.3□□□□□ -0.92
CCR9-204ENST00000422395 SMG6Q86US8 1419 aaKnown RBP9.3□□□□□ -0.92
CCR9-204ENST00000422395 WASHC2AQ641Q2 1341 aa9.3□□□□□ -0.92
CCR9-204ENST00000422395 A0A0G2JS52 829 aa9.3□□□□□ -0.92
CCR9-204ENST00000422395 EFCAB2Q5VUJ9 269 aa9.3□□□□□ -0.92
CCR9-204ENST00000422395 ANKK1Q8NFD2 765 aa9.3□□□□□ -0.92
CCR9-204ENST00000422395 ARHGEF12Q9NZN5 1544 aa9.29□□□□□ -0.92
CCR9-204ENST00000422395 ATP10AO60312 1499 aa9.29□□□□□ -0.92
CCR9-204ENST00000422395 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
CCR9-204ENST00000422395 CDC42BPAQ5VT25 1732 aa9.29□□□□□ -0.92
CCR9-204ENST00000422395 ITSN2Q9NZM3 1697 aa9.29□□□□□ -0.92
CCR9-204ENST00000422395 BHMG1C9JSJ3 638 aaPredicted RBP9.29□□□□□ -0.92
CCR9-204ENST00000422395 MLECQ14165 292 aa9.29□□□□□ -0.92
CCR9-204ENST00000422395 FYCO1Q9BQS8 1478 aa9.28□□□□□ -0.92
CCR9-204ENST00000422395 HFM1A2PYH4 1435 aa9.28□□□□□ -0.92
CCR9-204ENST00000422395 ABCA6Q8N139 1617 aa9.28□□□□□ -0.92
CCR9-204ENST00000422395 DIP2CQ9Y2E4 1556 aa9.28□□□□□ -0.92
CCR9-204ENST00000422395 FBXO41Q8TF61 875 aa9.28□□□□□ -0.92
CCR9-204ENST00000422395 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
CCR9-204ENST00000422395 SIN3AQ96ST3 1273 aa9.28□□□□□ -0.92
CCR9-204ENST00000422395 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
CCR9-204ENST00000422395 RNF123Q5XPI4 1314 aa9.27□□□□□ -0.93
CCR9-204ENST00000422395 ABCC1P33527 1531 aa9.27□□□□□ -0.93
CCR9-204ENST00000422395 ADAM33Q9BZ11 813 aa9.27□□□□□ -0.93
CCR9-204ENST00000422395 CASKIN1Q8WXD9 1431 aa9.26□□□□□ -0.93
CCR9-204ENST00000422395 SETD1BQ9UPS6 1966 aaKnown RBP9.26□□□□□ -0.93
CCR9-204ENST00000422395 REREQ9P2R6 1566 aa9.26□□□□□ -0.93
CCR9-204ENST00000422395 WASHC2CQ9Y4E1 1318 aa9.26□□□□□ -0.93
CCR9-204ENST00000422395 HSPA2P54652 639 aa9.26□□□□□ -0.93
CCR9-204ENST00000422395 DDRGK1Q96HY6 314 aa9.26□□□□□ -0.93
CCR9-204ENST00000422395 ANO8Q9HCE9 1232 aaPredicted RBP9.26□□□□□ -0.93
CCR9-204ENST00000422395 TCERG1O14776 1098 aaKnown RBP9.25□□□□□ -0.93
CCR9-204ENST00000422395 MS4A1P11836 297 aa9.25□□□□□ -0.93
CCR9-204ENST00000422395 EIF4G2P78344 907 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCR9-204ENST00000422395 NBR1Q14596 966 aa9.25□□□□□ -0.93
CCR9-204ENST00000422395 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
CCR9-204ENST00000422395 C3P01024 1663 aa9.24□□□□□ -0.93
CCR9-204ENST00000422395 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
CCR9-204ENST00000422395 FAM50AQ14320 339 aaKnown RBP9.24□□□□□ -0.93
CCR9-204ENST00000422395 KIDINS220Q9ULH0 1771 aa9.23□□□□□ -0.93
CCR9-204ENST00000422395 MLH3Q9UHC1 1453 aa9.23□□□□□ -0.93
CCR9-204ENST00000422395 NCKAP5LQ9HCH0 1330 aa9.23□□□□□ -0.93
CCR9-204ENST00000422395 AFAP1Q8N556 730 aa9.23□□□□□ -0.93
CCR9-204ENST00000422395 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
CCR9-204ENST00000422395 STRCQ7RTU9 1775 aa9.22□□□□□ -0.93
CCR9-204ENST00000422395 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms