RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
LINC00397-201ENST00000422074 NDUFV2P19404 249 aa9.84□□□□□ -0.83
LINC00397-201ENST00000422074 SPTLC1O15269 473 aa9.83□□□□□ -0.84
LINC00397-201ENST00000422074 DXOO77932 396 aaKnown RBP9.83□□□□□ -0.84
LINC00397-201ENST00000422074 RSBN1LQ6PCB5 846 aaPredicted RBP9.83□□□□□ -0.84
LINC00397-201ENST00000422074 PRDM9Q9NQV7 894 aa9.83□□□□□ -0.84
LINC00397-201ENST00000422074 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
LINC00397-201ENST00000422074 RETREG3Q86VR2 466 aa9.82□□□□□ -0.84
LINC00397-201ENST00000422074 SLC19A1P41440 591 aa9.81□□□□□ -0.84
LINC00397-201ENST00000422074 TUSC1Q2TAM9 212 aa9.81□□□□□ -0.84
LINC00397-201ENST00000422074 LIAT1Q6ZQX7 453 aa9.81□□□□□ -0.84
LINC00397-201ENST00000422074 SYMPKQ92797 1274 aaKnown RBP9.8□□□□□ -0.84
LINC00397-201ENST00000422074 KDM4CQ9H3R0 1056 aa9.8□□□□□ -0.84
LINC00397-201ENST00000422074 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
LINC00397-201ENST00000422074 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
LINC00397-201ENST00000422074 SPRYD7Q5W111 196 aa9.79□□□□□ -0.84
LINC00397-201ENST00000422074 RIC3Q7Z5B4 369 aa9.79□□□□□ -0.84
LINC00397-201ENST00000422074 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
LINC00397-201ENST00000422074 RPIAP49247 311 aa9.78□□□□□ -0.84
LINC00397-201ENST00000422074 PRPF38BQ5VTL8 546 aaKnown RBP9.78□□□□□ -0.84
LINC00397-201ENST00000422074 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
LINC00397-201ENST00000422074 GPBP1L1Q9HC44 474 aaPredicted RBP9.78□□□□□ -0.84
LINC00397-201ENST00000422074 JUNDP17535 347 aa9.77□□□□□ -0.85
LINC00397-201ENST00000422074 ZNF598Q86UK7 904 aaKnown RBP9.77□□□□□ -0.85
LINC00397-201ENST00000422074 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
LINC00397-201ENST00000422074 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
LINC00397-201ENST00000422074 MTMR2Q13614 643 aa9.76□□□□□ -0.85
LINC00397-201ENST00000422074 TPRNQ4KMQ1 711 aa9.76□□□□□ -0.85
LINC00397-201ENST00000422074 DESI1Q6ICB0 168 aa9.76□□□□□ -0.85
LINC00397-201ENST00000422074 PCDHB15Q9Y5E8 787 aa9.76□□□□□ -0.85
LINC00397-201ENST00000422074 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
LINC00397-201ENST00000422074 LAPTM4AQ15012 233 aa9.74□□□□□ -0.85
LINC00397-201ENST00000422074 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
LINC00397-201ENST00000422074 LIMD1Q9UGP4 676 aa9.74□□□□□ -0.85
LINC00397-201ENST00000422074 PLEKHG3A1L390 1219 aa9.73□□□□□ -0.85
LINC00397-201ENST00000422074 HRCP23327 699 aa9.73□□□□□ -0.85
LINC00397-201ENST00000422074 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
LINC00397-201ENST00000422074 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
LINC00397-201ENST00000422074 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
LINC00397-201ENST00000422074 LILRB3O75022 631 aa9.71□□□□□ -0.86
LINC00397-201ENST00000422074 CD2BP2O95400 341 aaKnown RBP9.71□□□□□ -0.86
LINC00397-201ENST00000422074 CLK2P49760 499 aaKnown RBP9.71□□□□□ -0.86
LINC00397-201ENST00000422074 PRR20EP86478 221 aa9.71□□□□□ -0.86
LINC00397-201ENST00000422074 PRR20CP86479 221 aa9.71□□□□□ -0.86
LINC00397-201ENST00000422074 PRR20DP86480 221 aa9.71□□□□□ -0.86
LINC00397-201ENST00000422074 PRR20BP86481 221 aa9.71□□□□□ -0.86
LINC00397-201ENST00000422074 PRR20AP86496 221 aa9.71□□□□□ -0.86
LINC00397-201ENST00000422074 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.86
LINC00397-201ENST00000422074 SKIV2LQ15477 1246 aaKnown RBP9.7□□□□□ -0.86
LINC00397-201ENST00000422074 PTPRNQ16849 979 aa9.7□□□□□ -0.86
LINC00397-201ENST00000422074 ZNF697Q5TEC3 545 aa9.7□□□□□ -0.86
LINC00397-201ENST00000422074 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
LINC00397-201ENST00000422074 GDF9O60383 454 aa9.69□□□□□ -0.86
LINC00397-201ENST00000422074 GFRA3O60609 400 aa9.69□□□□□ -0.86
LINC00397-201ENST00000422074 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
LINC00397-201ENST00000422074 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
LINC00397-201ENST00000422074 ZBTB24O43167 697 aaPredicted RBP9.68□□□□□ -0.86
LINC00397-201ENST00000422074 QPCTQ16769 361 aa9.68□□□□□ -0.86
LINC00397-201ENST00000422074 CABLES1Q8TDN4 633 aa9.68□□□□□ -0.86
LINC00397-201ENST00000422074 NUDT12Q9BQG2 462 aa9.68□□□□□ -0.86
LINC00397-201ENST00000422074 LYPD8Q6UX82 237 aa9.67□□□□□ -0.86
LINC00397-201ENST00000422074 GOPCQ9HD26 462 aa9.67□□□□□ -0.86
LINC00397-201ENST00000422074 EVA1BQ9NVM1 165 aa9.67□□□□□ -0.86
LINC00397-201ENST00000422074 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
LINC00397-201ENST00000422074 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
LINC00397-201ENST00000422074 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
LINC00397-201ENST00000422074 CCNYL3P0C7X3 344 aa9.66□□□□□ -0.86
LINC00397-201ENST00000422074 TRIM32Q13049 653 aa9.66□□□□□ -0.86
LINC00397-201ENST00000422074 NEUROD2Q15784 382 aa9.66□□□□□ -0.86
LINC00397-201ENST00000422074 PTCRAQ6ISU1 281 aaPredicted RBP9.65□□□□□ -0.86
LINC00397-201ENST00000422074 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00397-201ENST00000422074 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
LINC00397-201ENST00000422074 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
LINC00397-201ENST00000422074 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
LINC00397-201ENST00000422074 CCDC24Q8N4L8 307 aa9.64□□□□□ -0.87
LINC00397-201ENST00000422074 WNT7BP56706 349 aa9.63□□□□□ -0.87
LINC00397-201ENST00000422074 KCNH2Q12809 1159 aa9.63□□□□□ -0.87
LINC00397-201ENST00000422074 NUTM2BA6NNL0 878 aaPredicted RBP9.62□□□□□ -0.87
LINC00397-201ENST00000422074 NUTM2EB1AL46 878 aaPredicted RBP9.62□□□□□ -0.87
LINC00397-201ENST00000422074 WNT7AO00755 349 aa9.62□□□□□ -0.87
LINC00397-201ENST00000422074 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
LINC00397-201ENST00000422074 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
LINC00397-201ENST00000422074 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
LINC00397-201ENST00000422074 F12P00748 615 aaPredicted RBP9.61□□□□□ -0.87
LINC00397-201ENST00000422074 PER1O15534 1290 aaPredicted RBP9.59□□□□□ -0.87
LINC00397-201ENST00000422074 SKOR1P84550 965 aa9.59□□□□□ -0.87
LINC00397-201ENST00000422074 FBXO31Q5XUX0 539 aaPredicted RBP9.59□□□□□ -0.87
LINC00397-201ENST00000422074 TOR4AQ9NXH8 423 aa9.59□□□□□ -0.87
LINC00397-201ENST00000422074 TNFRSF10AO00220 468 aa9.58□□□□□ -0.88
LINC00397-201ENST00000422074 LCE2BO14633 110 aa9.58□□□□□ -0.88
LINC00397-201ENST00000422074 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
LINC00397-201ENST00000422074 Q6ZNB5 142 aa9.58□□□□□ -0.88
LINC00397-201ENST00000422074 UNC93B1Q9H1C4 597 aa9.58□□□□□ -0.88
LINC00397-201ENST00000422074 FOXC1Q12948 553 aa9.57□□□□□ -0.88
LINC00397-201ENST00000422074 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
LINC00397-201ENST00000422074 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
LINC00397-201ENST00000422074 DGAT1O75907 488 aa9.56□□□□□ -0.88
LINC00397-201ENST00000422074 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
LINC00397-201ENST00000422074 SH3BP2P78314 561 aa9.54□□□□□ -0.88
LINC00397-201ENST00000422074 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms