RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 ABCC5O15440 1437 aa18.96■□□□□ 0.63
UFD1-203ENST00000421968 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
UFD1-203ENST00000421968 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
UFD1-203ENST00000421968 A0A0G2JS52 829 aa18.94■□□□□ 0.62
UFD1-203ENST00000421968 C1QTNF8P60827 252 aa18.94■□□□□ 0.62
UFD1-203ENST00000421968 MYT1Q01538 1121 aa18.94■□□□□ 0.62
UFD1-203ENST00000421968 METP08581 1390 aa18.93■□□□□ 0.62
UFD1-203ENST00000421968 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
UFD1-203ENST00000421968 PPP1R1BQ9UD71 204 aaPredicted RBP18.93■□□□□ 0.62
UFD1-203ENST00000421968 VPS72Q15906 364 aa18.92■□□□□ 0.62
UFD1-203ENST00000421968 NPHP3Q7Z494 1330 aa18.92■□□□□ 0.62
UFD1-203ENST00000421968 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
UFD1-203ENST00000421968 XPCQ01831 940 aaPredicted RBP18.9■□□□□ 0.62
UFD1-203ENST00000421968 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
UFD1-203ENST00000421968 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
UFD1-203ENST00000421968 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.61
UFD1-203ENST00000421968 EZH2Q15910 746 aaKnown RBP18.89■□□□□ 0.61
UFD1-203ENST00000421968 PXDNQ92626 1479 aa18.86■□□□□ 0.61
UFD1-203ENST00000421968 DAPK1P53355 1430 aa18.86■□□□□ 0.61
UFD1-203ENST00000421968 NINLQ9Y2I6 1382 aa18.86■□□□□ 0.61
UFD1-203ENST00000421968 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
UFD1-203ENST00000421968 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
UFD1-203ENST00000421968 FOXO3O43524 673 aa18.85■□□□□ 0.61
UFD1-203ENST00000421968 PTPN23Q9H3S7 1636 aa18.85■□□□□ 0.61
UFD1-203ENST00000421968 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
UFD1-203ENST00000421968 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
UFD1-203ENST00000421968 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
UFD1-203ENST00000421968 HAP1P54257 671 aaPredicted RBP18.82■□□□□ 0.6
UFD1-203ENST00000421968 FAM98CQ17RN3 349 aaKnown RBP18.82■□□□□ 0.6
UFD1-203ENST00000421968 CAMKK2Q96RR4 588 aa18.81■□□□□ 0.6
UFD1-203ENST00000421968 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
UFD1-203ENST00000421968 USP32Q8NFA0 1604 aa18.81■□□□□ 0.6
UFD1-203ENST00000421968 TNS1Q9HBL0 1735 aaKnown RBP18.79■□□□□ 0.6
UFD1-203ENST00000421968 LRPPRCP42704 1394 aaKnown RBP18.79■□□□□ 0.6
UFD1-203ENST00000421968 KCNQ2O43526 872 aa18.78■□□□□ 0.6
UFD1-203ENST00000421968 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
UFD1-203ENST00000421968 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
UFD1-203ENST00000421968 PLCH1Q4KWH8 1693 aa18.77■□□□□ 0.6
UFD1-203ENST00000421968 ROBO2Q9HCK4 1378 aa18.77■□□□□ 0.6
UFD1-203ENST00000421968 NWD2Q9ULI1 1742 aa18.77■□□□□ 0.59
UFD1-203ENST00000421968 NBPF8Q3BBV2 869 aa18.76■□□□□ 0.59
UFD1-203ENST00000421968 NBPF14Q5TI25 921 aa18.76■□□□□ 0.59
UFD1-203ENST00000421968 SPATA31A3Q5VYP0 1347 aa18.75■□□□□ 0.59
UFD1-203ENST00000421968 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
UFD1-203ENST00000421968 ADGRB2O60241 1585 aa18.75■□□□□ 0.59
UFD1-203ENST00000421968 E9PCH4 1651 aa18.75■□□□□ 0.59
UFD1-203ENST00000421968 IQGAP3Q86VI3 1631 aa18.74■□□□□ 0.59
UFD1-203ENST00000421968 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
UFD1-203ENST00000421968 TRIM37O94972 964 aa18.74■□□□□ 0.59
UFD1-203ENST00000421968 APBA3O96018 575 aa18.73■□□□□ 0.59
UFD1-203ENST00000421968 CABLES1Q8TDN4 633 aa18.73■□□□□ 0.59
UFD1-203ENST00000421968 ANKRD50Q9ULJ7 1429 aa18.73■□□□□ 0.59
UFD1-203ENST00000421968 CEP350Q5VT06 3117 aa18.72■□□□□ 0.59
UFD1-203ENST00000421968 CHD4Q14839 1912 aa18.7■□□□□ 0.58
UFD1-203ENST00000421968 NUTM2FA1L443 756 aa18.69■□□□□ 0.58
UFD1-203ENST00000421968 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
UFD1-203ENST00000421968 FAM83GA6ND36 823 aa18.68■□□□□ 0.58
UFD1-203ENST00000421968 GIGYF1O75420 1035 aaPredicted RBP18.68■□□□□ 0.58
UFD1-203ENST00000421968 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
UFD1-203ENST00000421968 FAM196AQ6ZSG2 479 aa18.67■□□□□ 0.58
UFD1-203ENST00000421968 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
UFD1-203ENST00000421968 RREB1Q92766 1687 aa18.66■□□□□ 0.58
UFD1-203ENST00000421968 UTRNP46939 3433 aa18.66■□□□□ 0.58
UFD1-203ENST00000421968 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
UFD1-203ENST00000421968 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
UFD1-203ENST00000421968 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
UFD1-203ENST00000421968 LMOD2Q6P5Q4 547 aa18.63■□□□□ 0.57
UFD1-203ENST00000421968 NRAPQ86VF7 1730 aa18.63■□□□□ 0.57
UFD1-203ENST00000421968 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
UFD1-203ENST00000421968 PRAG1Q86YV5 1406 aa18.61■□□□□ 0.57
UFD1-203ENST00000421968 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
UFD1-203ENST00000421968 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
UFD1-203ENST00000421968 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
UFD1-203ENST00000421968 NEXMIFQ5QGS0 1516 aa18.6■□□□□ 0.57
UFD1-203ENST00000421968 THSD7AQ9UPZ6 1657 aa18.6■□□□□ 0.57
UFD1-203ENST00000421968 PSME1Q06323 249 aa18.59■□□□□ 0.57
UFD1-203ENST00000421968 NAIPQ13075 1403 aa18.58■□□□□ 0.57
UFD1-203ENST00000421968 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
UFD1-203ENST00000421968 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
UFD1-203ENST00000421968 KIF1AQ12756 1690 aa18.57■□□□□ 0.56
UFD1-203ENST00000421968 SYT17Q9BSW7 474 aa18.55■□□□□ 0.56
UFD1-203ENST00000421968 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
UFD1-203ENST00000421968 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
UFD1-203ENST00000421968 MYOM1P52179 1685 aa18.54■□□□□ 0.56
UFD1-203ENST00000421968 VGFO15240 615 aaPredicted RBP18.53■□□□□ 0.56
UFD1-203ENST00000421968 ZBTB7AO95365 584 aa18.53■□□□□ 0.56
UFD1-203ENST00000421968 NUP155O75694 1391 aa18.53■□□□□ 0.56
UFD1-203ENST00000421968 COL14A1Q05707 1796 aaKnown RBP18.52■□□□□ 0.55
UFD1-203ENST00000421968 SBNO1A3KN83 1393 aa18.52■□□□□ 0.55
UFD1-203ENST00000421968 PTGER2P43116 358 aa18.51■□□□□ 0.55
UFD1-203ENST00000421968 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
UFD1-203ENST00000421968 WAPLQ7Z5K2 1190 aa18.5■□□□□ 0.55
UFD1-203ENST00000421968 PDGFDQ9GZP0 370 aaPredicted RBP18.5■□□□□ 0.55
UFD1-203ENST00000421968 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
UFD1-203ENST00000421968 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
UFD1-203ENST00000421968 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
UFD1-203ENST00000421968 CASZ1Q86V15 1759 aa18.49■□□□□ 0.55
UFD1-203ENST00000421968 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
UFD1-203ENST00000421968 FMN2Q9NZ56 1722 aa18.48■□□□□ 0.55
UFD1-203ENST00000421968 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms