RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
CAST-208ENST00000421689 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.61■□□□□ 0.25
CAST-208ENST00000421689 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
CAST-208ENST00000421689 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
CAST-208ENST00000421689 ADGRL3Q9HAR2 1447 aa16.59■□□□□ 0.25
CAST-208ENST00000421689 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
CAST-208ENST00000421689 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
CAST-208ENST00000421689 SLC24A1O60721 1099 aa16.57■□□□□ 0.24
CAST-208ENST00000421689 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
CAST-208ENST00000421689 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
CAST-208ENST00000421689 ADGRB2O60241 1585 aa16.56■□□□□ 0.24
CAST-208ENST00000421689 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
CAST-208ENST00000421689 MSH6P52701 1360 aa16.56■□□□□ 0.24
CAST-208ENST00000421689 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
CAST-208ENST00000421689 HIRIP3Q9BW71 556 aaPredicted RBP16.55■□□□□ 0.24
CAST-208ENST00000421689 TESK2Q96S53 571 aa16.54■□□□□ 0.24
CAST-208ENST00000421689 CDC42BPGQ6DT37 1551 aa16.54■□□□□ 0.24
CAST-208ENST00000421689 DCCP43146 1447 aa16.53■□□□□ 0.24
CAST-208ENST00000421689 ATF3P18847 181 aa16.53■□□□□ 0.24
CAST-208ENST00000421689 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
CAST-208ENST00000421689 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
CAST-208ENST00000421689 CADPS2Q86UW7 1296 aa16.52■□□□□ 0.24
CAST-208ENST00000421689 FMN2Q9NZ56 1722 aa16.51■□□□□ 0.23
CAST-208ENST00000421689 TMF1P82094 1093 aa16.51■□□□□ 0.23
CAST-208ENST00000421689 TULP4Q9NRJ4 1543 aa16.5■□□□□ 0.23
CAST-208ENST00000421689 CDK19Q9BWU1 502 aa16.5■□□□□ 0.23
CAST-208ENST00000421689 SRPK2P78362 688 aaKnown RBP16.47■□□□□ 0.23
CAST-208ENST00000421689 CDCA8Q53HL2 280 aa16.47■□□□□ 0.23
CAST-208ENST00000421689 MST1RQ04912 1400 aa16.46■□□□□ 0.23
CAST-208ENST00000421689 TOM1O60784 492 aa16.46■□□□□ 0.23
CAST-208ENST00000421689 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
CAST-208ENST00000421689 CABP2Q9NPB3 220 aa16.46■□□□□ 0.23
CAST-208ENST00000421689 DISP3Q9P2K9 1392 aa16.46■□□□□ 0.23
CAST-208ENST00000421689 RGPD8O14715 1765 aaPredicted RBP16.46■□□□□ 0.22
CAST-208ENST00000421689 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
CAST-208ENST00000421689 NUTM2FA1L443 756 aa16.45■□□□□ 0.22
CAST-208ENST00000421689 SLAIN2Q9P270 581 aa16.45■□□□□ 0.22
CAST-208ENST00000421689 ITSN1Q15811 1721 aa16.45■□□□□ 0.22
CAST-208ENST00000421689 USP32Q8NFA0 1604 aa16.45■□□□□ 0.22
CAST-208ENST00000421689 C1orf167Q5SNV9 1468 aa16.44■□□□□ 0.22
CAST-208ENST00000421689 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
CAST-208ENST00000421689 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
CAST-208ENST00000421689 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
CAST-208ENST00000421689 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
CAST-208ENST00000421689 ATP7BP35670 1465 aa16.42■□□□□ 0.22
CAST-208ENST00000421689 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
CAST-208ENST00000421689 TOPAZ1Q8N9V7 1692 aa16.41■□□□□ 0.22
CAST-208ENST00000421689 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
CAST-208ENST00000421689 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
CAST-208ENST00000421689 KIF1AQ12756 1690 aa16.39■□□□□ 0.21
CAST-208ENST00000421689 PPIP5K1Q6PFW1 1433 aa16.38■□□□□ 0.21
CAST-208ENST00000421689 ORAI2Q96SN7 254 aa16.38■□□□□ 0.21
CAST-208ENST00000421689 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
CAST-208ENST00000421689 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
CAST-208ENST00000421689 KIF7Q2M1P5 1343 aa16.38■□□□□ 0.21
CAST-208ENST00000421689 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
CAST-208ENST00000421689 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
CAST-208ENST00000421689 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
CAST-208ENST00000421689 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
CAST-208ENST00000421689 CCDC7Q96M83 1385 aa16.37■□□□□ 0.21
CAST-208ENST00000421689 NINLQ9Y2I6 1382 aa16.37■□□□□ 0.21
CAST-208ENST00000421689 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
CAST-208ENST00000421689 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
CAST-208ENST00000421689 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
CAST-208ENST00000421689 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
CAST-208ENST00000421689 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
CAST-208ENST00000421689 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
CAST-208ENST00000421689 MYOM1P52179 1685 aa16.34■□□□□ 0.21
CAST-208ENST00000421689 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
CAST-208ENST00000421689 SLC12A5Q9H2X9 1139 aa16.34■□□□□ 0.21
CAST-208ENST00000421689 ACEP12821 1306 aa16.33■□□□□ 0.2
CAST-208ENST00000421689 POLR3AO14802 1390 aaPredicted RBP16.33■□□□□ 0.2
CAST-208ENST00000421689 AKAP12Q02952 1782 aa16.32■□□□□ 0.2
CAST-208ENST00000421689 NHSL1Q5SYE7 1610 aa16.32■□□□□ 0.2
CAST-208ENST00000421689 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
CAST-208ENST00000421689 NPHP3Q7Z494 1330 aa16.31■□□□□ 0.2
CAST-208ENST00000421689 FOXO3O43524 673 aa16.31■□□□□ 0.2
CAST-208ENST00000421689 HDGFL2Q7Z4V5 671 aaPredicted RBP16.31■□□□□ 0.2
CAST-208ENST00000421689 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
CAST-208ENST00000421689 CPSF1Q10570 1443 aaKnown RBP16.3■□□□□ 0.2
CAST-208ENST00000421689 PSME1Q06323 249 aa16.3■□□□□ 0.2
CAST-208ENST00000421689 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
CAST-208ENST00000421689 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
CAST-208ENST00000421689 AHDC1Q5TGY3 1603 aaPredicted RBP16.29■□□□□ 0.2
CAST-208ENST00000421689 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
CAST-208ENST00000421689 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
CAST-208ENST00000421689 DDX17Q92841 729 aaKnown RBP16.28■□□□□ 0.2
CAST-208ENST00000421689 PHLPP1O60346 1717 aa16.28■□□□□ 0.2
CAST-208ENST00000421689 A0A1W2PP64 1363 aa16.27■□□□□ 0.2
CAST-208ENST00000421689 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
CAST-208ENST00000421689 FBXO41Q8TF61 875 aa16.27■□□□□ 0.2
CAST-208ENST00000421689 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
CAST-208ENST00000421689 SOS2Q07890 1332 aaPredicted RBP16.26■□□□□ 0.19
CAST-208ENST00000421689 PANK3Q9H999 370 aa16.26■□□□□ 0.19
CAST-208ENST00000421689 PXDNQ92626 1479 aa16.26■□□□□ 0.19
CAST-208ENST00000421689 USP6P35125 1406 aa16.26■□□□□ 0.19
CAST-208ENST00000421689 XPCQ01831 940 aaPredicted RBP16.25■□□□□ 0.19
CAST-208ENST00000421689 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
CAST-208ENST00000421689 SBNO1A3KN83 1393 aa16.24■□□□□ 0.19
CAST-208ENST00000421689 NRKQ7Z2Y5 1582 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms