RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 CHGAP10645 457 aaKnown RBP9.03□□□□□ -0.96
HDAC8-212ENST00000421523 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
HDAC8-212ENST00000421523 EZH2Q15910 746 aaKnown RBP9.03□□□□□ -0.96
HDAC8-212ENST00000421523 CCDC9Q9Y3X0 531 aaKnown RBP9.03□□□□□ -0.96
HDAC8-212ENST00000421523 GOLGB1Q14789 3259 aaKnown RBP9.02□□□□□ -0.96
HDAC8-212ENST00000421523 TMEM131LA2VDJ0 1609 aa9.02□□□□□ -0.96
HDAC8-212ENST00000421523 KIF15Q9NS87 1388 aa9.02□□□□□ -0.97
HDAC8-212ENST00000421523 FAM182BQ5T319 152 aa9.02□□□□□ -0.97
HDAC8-212ENST00000421523 ORAI2Q96SN7 254 aa9.02□□□□□ -0.97
HDAC8-212ENST00000421523 SLC52A1Q9NWF4 448 aa9.02□□□□□ -0.97
HDAC8-212ENST00000421523 SLIT2O94813 1529 aa9.01□□□□□ -0.97
HDAC8-212ENST00000421523 ERBINQ96RT1 1412 aa9.01□□□□□ -0.97
HDAC8-212ENST00000421523 TNS1Q9HBL0 1735 aaKnown RBP9.01□□□□□ -0.97
HDAC8-212ENST00000421523 LMTK2Q8IWU2 1503 aa9□□□□□ -0.97
HDAC8-212ENST00000421523 GIGYF1O75420 1035 aaPredicted RBP9□□□□□ -0.97
HDAC8-212ENST00000421523 XPCQ01831 940 aaPredicted RBP9□□□□□ -0.97
HDAC8-212ENST00000421523 ABCF1Q8NE71 845 aaKnown RBP eCLIP9□□□□□ -0.97
HDAC8-212ENST00000421523 RRP7BPQ9NSQ0 103 aa9□□□□□ -0.97
HDAC8-212ENST00000421523 RPRD2Q5VT52 1461 aaKnown RBP9□□□□□ -0.97
HDAC8-212ENST00000421523 SPON1Q9HCB6 807 aa8.99□□□□□ -0.97
HDAC8-212ENST00000421523 DISP2A7MBM2 1401 aa8.98□□□□□ -0.97
HDAC8-212ENST00000421523 PLEKHG5O94827 1062 aa8.98□□□□□ -0.97
HDAC8-212ENST00000421523 ADGRB2O60241 1585 aa8.98□□□□□ -0.97
HDAC8-212ENST00000421523 CAPN15O75808 1086 aa8.97□□□□□ -0.97
HDAC8-212ENST00000421523 VPS72Q15906 364 aa8.97□□□□□ -0.97
HDAC8-212ENST00000421523 FAM98CQ17RN3 349 aaKnown RBP8.97□□□□□ -0.97
HDAC8-212ENST00000421523 USP32Q8NFA0 1604 aa8.97□□□□□ -0.97
HDAC8-212ENST00000421523 PTPN23Q9H3S7 1636 aa8.97□□□□□ -0.97
HDAC8-212ENST00000421523 PLCH1Q4KWH8 1693 aa8.97□□□□□ -0.97
HDAC8-212ENST00000421523 PXDNQ92626 1479 aa8.96□□□□□ -0.97
HDAC8-212ENST00000421523 KCNQ2O43526 872 aa8.96□□□□□ -0.98
HDAC8-212ENST00000421523 CHD4Q14839 1912 aa8.95□□□□□ -0.98
HDAC8-212ENST00000421523 NRKQ7Z2Y5 1582 aa8.95□□□□□ -0.98
HDAC8-212ENST00000421523 NRXN3Q9Y4C0 1643 aa8.95□□□□□ -0.98
HDAC8-212ENST00000421523 NUP188Q5SRE5 1749 aa8.95□□□□□ -0.98
HDAC8-212ENST00000421523 ONECUT3O60422 494 aaPredicted RBP8.95□□□□□ -0.98
HDAC8-212ENST00000421523 CAMKK2Q96RR4 588 aa8.95□□□□□ -0.98
HDAC8-212ENST00000421523 NPHP3Q7Z494 1330 aa8.95□□□□□ -0.98
HDAC8-212ENST00000421523 METP08581 1390 aa8.95□□□□□ -0.98
HDAC8-212ENST00000421523 TRIM37O94972 964 aa8.94□□□□□ -0.98
HDAC8-212ENST00000421523 HAP1P54257 671 aaPredicted RBP8.94□□□□□ -0.98
HDAC8-212ENST00000421523 ADGRL2O95490 1459 aa8.94□□□□□ -0.98
HDAC8-212ENST00000421523 RREB1Q92766 1687 aa8.94□□□□□ -0.98
HDAC8-212ENST00000421523 APBA3O96018 575 aa8.93□□□□□ -0.98
HDAC8-212ENST00000421523 ESCO1Q5FWF5 840 aa8.93□□□□□ -0.98
HDAC8-212ENST00000421523 CROCC2H7BZ55 1655 aa8.93□□□□□ -0.98
HDAC8-212ENST00000421523 MYOM1P52179 1685 aa8.93□□□□□ -0.98
HDAC8-212ENST00000421523 NWD2Q9ULI1 1742 aa8.92□□□□□ -0.98
HDAC8-212ENST00000421523 FOXO3O43524 673 aa8.92□□□□□ -0.98
HDAC8-212ENST00000421523 NBPF8Q3BBV2 869 aa8.92□□□□□ -0.98
HDAC8-212ENST00000421523 NBPF14Q5TI25 921 aa8.92□□□□□ -0.98
HDAC8-212ENST00000421523 PARD3Q8TEW0 1356 aa8.91□□□□□ -0.98
HDAC8-212ENST00000421523 MYOM3Q5VTT5 1437 aa8.9□□□□□ -0.98
HDAC8-212ENST00000421523 LOC105371045A0A1W2PR82 267 aa8.9□□□□□ -0.98
HDAC8-212ENST00000421523 CABLES1Q8TDN4 633 aa8.9□□□□□ -0.98
HDAC8-212ENST00000421523 VPS8Q8N3P4 1428 aa8.89□□□□□ -0.99
HDAC8-212ENST00000421523 ABCC5O15440 1437 aa8.88□□□□□ -0.99
HDAC8-212ENST00000421523 NRAPQ86VF7 1730 aa8.88□□□□□ -0.99
HDAC8-212ENST00000421523 ZBTB7AO95365 584 aa8.88□□□□□ -0.99
HDAC8-212ENST00000421523 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
HDAC8-212ENST00000421523 ROBO2Q9HCK4 1378 aa8.87□□□□□ -0.99
HDAC8-212ENST00000421523 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
HDAC8-212ENST00000421523 KANK4Q5T7N3 995 aaPredicted RBP8.87□□□□□ -0.99
HDAC8-212ENST00000421523 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
HDAC8-212ENST00000421523 THSD7AQ9UPZ6 1657 aa8.87□□□□□ -0.99
HDAC8-212ENST00000421523 SPATA31A3Q5VYP0 1347 aa8.86□□□□□ -0.99
HDAC8-212ENST00000421523 ABCA3Q99758 1704 aa8.86□□□□□ -0.99
HDAC8-212ENST00000421523 SHANK3Q9BYB0 1731 aa8.86□□□□□ -0.99
HDAC8-212ENST00000421523 SLC34A2O95436 690 aa8.86□□□□□ -0.99
HDAC8-212ENST00000421523 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
HDAC8-212ENST00000421523 PCNTO95613 3336 aa8.86□□□□□ -0.99
HDAC8-212ENST00000421523 CASZ1Q86V15 1759 aa8.86□□□□□ -0.99
HDAC8-212ENST00000421523 LRPPRCP42704 1394 aaKnown RBP8.86□□□□□ -0.99
HDAC8-212ENST00000421523 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
HDAC8-212ENST00000421523 IQGAP3Q86VI3 1631 aa8.85□□□□□ -0.99
HDAC8-212ENST00000421523 FAM83GA6ND36 823 aa8.85□□□□□ -0.99
HDAC8-212ENST00000421523 FAM196AQ6ZSG2 479 aa8.85□□□□□ -0.99
HDAC8-212ENST00000421523 SYT17Q9BSW7 474 aa8.85□□□□□ -0.99
HDAC8-212ENST00000421523 BTG4Q9NY30 223 aa8.85□□□□□ -0.99
HDAC8-212ENST00000421523 ATF5Q9Y2D1 282 aaPredicted RBP8.85□□□□□ -0.99
HDAC8-212ENST00000421523 HSPA6P17066 643 aa8.84□□□□□ -0.99
HDAC8-212ENST00000421523 DAPK1P53355 1430 aa8.84□□□□□ -0.99
HDAC8-212ENST00000421523 ZNF326Q5BKZ1 582 aaKnown RBP8.84□□□□□ -0.99
HDAC8-212ENST00000421523 CDC42BPGQ6DT37 1551 aa8.84□□□□□ -0.99
HDAC8-212ENST00000421523 LMOD2Q6P5Q4 547 aa8.84□□□□□ -0.99
HDAC8-212ENST00000421523 E9PCH4 1651 aa8.84□□□□□ -0.99
HDAC8-212ENST00000421523 ANKRD30AQ9BXX3 1397 aa8.84□□□□□ -0.99
HDAC8-212ENST00000421523 CCDC144AA2RUR9 1427 aa8.83□□□□□ -1
HDAC8-212ENST00000421523 TNS3Q68CZ2 1445 aa8.83□□□□□ -1
HDAC8-212ENST00000421523 PTGER2P43116 358 aa8.83□□□□□ -1
HDAC8-212ENST00000421523 GPR162Q16538 588 aa8.83□□□□□ -1
HDAC8-212ENST00000421523 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
HDAC8-212ENST00000421523 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
HDAC8-212ENST00000421523 SPATA31A5Q5VU36 1347 aa8.81□□□□□ -1
HDAC8-212ENST00000421523 SPATA31A7Q8IWB4 1347 aa8.81□□□□□ -1
HDAC8-212ENST00000421523 NEXMIFQ5QGS0 1516 aa8.81□□□□□ -1
HDAC8-212ENST00000421523 COL13A1Q5TAT6 717 aaPredicted RBP8.81□□□□□ -1
HDAC8-212ENST00000421523 KRT28Q7Z3Y7 464 aa8.81□□□□□ -1
HDAC8-212ENST00000421523 HFM1A2PYH4 1435 aa8.8□□□□□ -1
HDAC8-212ENST00000421523 NAIPQ13075 1403 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms