RNA–Protein interactions for RNA: ENST00000421234.5

LINC00475-204, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-204ENST00000421234 NCOA3Q9Y6Q9 1424 aa19.08■□□□□ 0.65
LINC00475-204ENST00000421234 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.08■□□□□ 0.65
LINC00475-204ENST00000421234 DISP3Q9P2K9 1392 aa19.08■□□□□ 0.65
LINC00475-204ENST00000421234 METP08581 1390 aa19.06■□□□□ 0.64
LINC00475-204ENST00000421234 ZNF692Q9BU19 519 aaPredicted RBP19.06■□□□□ 0.64
LINC00475-204ENST00000421234 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
LINC00475-204ENST00000421234 LHX8Q68G74 356 aa19.05■□□□□ 0.64
LINC00475-204ENST00000421234 FAM135BQ49AJ0 1406 aa19.04■□□□□ 0.64
LINC00475-204ENST00000421234 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
LINC00475-204ENST00000421234 SSUH2Q9Y2M2 353 aa19.03■□□□□ 0.64
LINC00475-204ENST00000421234 MKRN4PQ13434 485 aaPredicted RBP19.02■□□□□ 0.64
LINC00475-204ENST00000421234 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.63
LINC00475-204ENST00000421234 PHLPP1O60346 1717 aa19.01■□□□□ 0.63
LINC00475-204ENST00000421234 ANKRD30BQ9BXX2 1392 aa19.01■□□□□ 0.63
LINC00475-204ENST00000421234 NALCNQ8IZF0 1738 aa19■□□□□ 0.63
LINC00475-204ENST00000421234 ATF3P18847 181 aa19■□□□□ 0.63
LINC00475-204ENST00000421234 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
LINC00475-204ENST00000421234 C19orf44Q9H6X5 657 aa19■□□□□ 0.63
LINC00475-204ENST00000421234 SLAIN2Q9P270 581 aa19■□□□□ 0.63
LINC00475-204ENST00000421234 HRCP23327 699 aa18.99■□□□□ 0.63
LINC00475-204ENST00000421234 DCCP43146 1447 aa18.98■□□□□ 0.63
LINC00475-204ENST00000421234 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
LINC00475-204ENST00000421234 PTCH1Q13635 1447 aa18.97■□□□□ 0.63
LINC00475-204ENST00000421234 CHADLQ6NUI6 762 aa18.96■□□□□ 0.63
LINC00475-204ENST00000421234 ADGRL3Q9HAR2 1447 aa18.95■□□□□ 0.62
LINC00475-204ENST00000421234 LAMC1P11047 1609 aa18.95■□□□□ 0.62
LINC00475-204ENST00000421234 PIK3C2GO75747 1445 aa18.93■□□□□ 0.62
LINC00475-204ENST00000421234 MYOM2P54296 1465 aa18.93■□□□□ 0.62
LINC00475-204ENST00000421234 KNDC1Q76NI1 1749 aa18.93■□□□□ 0.62
LINC00475-204ENST00000421234 PRAG1Q86YV5 1406 aa18.92■□□□□ 0.62
LINC00475-204ENST00000421234 ROBO2Q9HCK4 1378 aa18.91■□□□□ 0.62
LINC00475-204ENST00000421234 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.62
LINC00475-204ENST00000421234 AHDC1Q5TGY3 1603 aaPredicted RBP18.89■□□□□ 0.62
LINC00475-204ENST00000421234 MST1RQ04912 1400 aa18.89■□□□□ 0.61
LINC00475-204ENST00000421234 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
LINC00475-204ENST00000421234 NRXN1Q9ULB1 1477 aa18.88■□□□□ 0.61
LINC00475-204ENST00000421234 STK26Q9P289 416 aa18.87■□□□□ 0.61
LINC00475-204ENST00000421234 LRPPRCP42704 1394 aaKnown RBP18.86■□□□□ 0.61
LINC00475-204ENST00000421234 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
LINC00475-204ENST00000421234 TMEM132EQ6IEE7 984 aa18.85■□□□□ 0.61
LINC00475-204ENST00000421234 BRINP3Q76B58 766 aa18.85■□□□□ 0.61
LINC00475-204ENST00000421234 TECPR2O15040 1411 aa18.84■□□□□ 0.61
LINC00475-204ENST00000421234 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
LINC00475-204ENST00000421234 ILDR2Q71H61 639 aa18.84■□□□□ 0.61
LINC00475-204ENST00000421234 CDC42BPGQ6DT37 1551 aa18.84■□□□□ 0.61
LINC00475-204ENST00000421234 JCADQ9P266 1359 aa18.83■□□□□ 0.61
LINC00475-204ENST00000421234 PRR29P0C7W0 189 aa18.83■□□□□ 0.6
LINC00475-204ENST00000421234 C14orf93Q9H972 538 aaKnown RBP18.83■□□□□ 0.6
LINC00475-204ENST00000421234 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
LINC00475-204ENST00000421234 ABCC11Q96J66 1382 aa18.82■□□□□ 0.6
LINC00475-204ENST00000421234 DCAF11Q8TEB1 546 aa18.82■□□□□ 0.6
LINC00475-204ENST00000421234 KDM2AQ9Y2K7 1162 aa18.82■□□□□ 0.6
LINC00475-204ENST00000421234 C1orf167Q5SNV9 1468 aa18.82■□□□□ 0.6
LINC00475-204ENST00000421234 DHX57Q6P158 1386 aaKnown RBP18.81■□□□□ 0.6
LINC00475-204ENST00000421234 CFAP70Q5T0N1 1121 aa18.81■□□□□ 0.6
LINC00475-204ENST00000421234 WAPLQ7Z5K2 1190 aa18.79■□□□□ 0.6
LINC00475-204ENST00000421234 STAC3Q96MF2 364 aa18.78■□□□□ 0.6
LINC00475-204ENST00000421234 FMN2Q9NZ56 1722 aa18.77■□□□□ 0.59
LINC00475-204ENST00000421234 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
LINC00475-204ENST00000421234 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
LINC00475-204ENST00000421234 SPATA31A6Q5VVP1 1343 aa18.74■□□□□ 0.59
LINC00475-204ENST00000421234 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
LINC00475-204ENST00000421234 SIRT1Q96EB6 747 aa18.73■□□□□ 0.59
LINC00475-204ENST00000421234 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
LINC00475-204ENST00000421234 RGPD8O14715 1765 aaPredicted RBP18.73■□□□□ 0.59
LINC00475-204ENST00000421234 KIAA1210Q9ULL0 1709 aa18.72■□□□□ 0.59
LINC00475-204ENST00000421234 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
LINC00475-204ENST00000421234 LRRC59Q96AG4 307 aaKnown RBP18.72■□□□□ 0.59
LINC00475-204ENST00000421234 KIF1AQ12756 1690 aa18.71■□□□□ 0.59
LINC00475-204ENST00000421234 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC00475-204ENST00000421234 ESCO1Q5FWF5 840 aa18.71■□□□□ 0.59
LINC00475-204ENST00000421234 MEX3CQ5U5Q3 659 aaKnown RBP18.71■□□□□ 0.59
LINC00475-204ENST00000421234 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
LINC00475-204ENST00000421234 POGKQ9P215 609 aa18.71■□□□□ 0.59
LINC00475-204ENST00000421234 NUTM2FA1L443 756 aa18.7■□□□□ 0.58
LINC00475-204ENST00000421234 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
LINC00475-204ENST00000421234 TRAK1Q9UPV9 953 aa18.7■□□□□ 0.58
LINC00475-204ENST00000421234 LRP6O75581 1613 aa18.7■□□□□ 0.58
LINC00475-204ENST00000421234 SOCS7O14512 581 aa18.69■□□□□ 0.58
LINC00475-204ENST00000421234 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
LINC00475-204ENST00000421234 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
LINC00475-204ENST00000421234 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
LINC00475-204ENST00000421234 POTEIP0CG38 1075 aa18.67■□□□□ 0.58
LINC00475-204ENST00000421234 CD44P16070 742 aaKnown RBP18.67■□□□□ 0.58
LINC00475-204ENST00000421234 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
LINC00475-204ENST00000421234 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
LINC00475-204ENST00000421234 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
LINC00475-204ENST00000421234 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
LINC00475-204ENST00000421234 RGS17Q9UGC6 210 aaPredicted RBP18.65■□□□□ 0.58
LINC00475-204ENST00000421234 SOS2Q07890 1332 aaPredicted RBP18.65■□□□□ 0.58
LINC00475-204ENST00000421234 FOXO3O43524 673 aa18.62■□□□□ 0.57
LINC00475-204ENST00000421234 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
LINC00475-204ENST00000421234 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
LINC00475-204ENST00000421234 PXDNQ92626 1479 aa18.62■□□□□ 0.57
LINC00475-204ENST00000421234 COL22A1Q8NFW1 1626 aaPredicted RBP18.62■□□□□ 0.57
LINC00475-204ENST00000421234 USP32Q8NFA0 1604 aa18.61■□□□□ 0.57
LINC00475-204ENST00000421234 EIF3AQ14152 1382 aaKnown RBP18.61■□□□□ 0.57
LINC00475-204ENST00000421234 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
LINC00475-204ENST00000421234 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
LINC00475-204ENST00000421234 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms