RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 TNRQ92752 1358 aa13.37□□□□□ -0.27
PTCH1-206ENST00000421141 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-206ENST00000421141 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
PTCH1-206ENST00000421141 A2MP01023 1474 aa13.37□□□□□ -0.27
PTCH1-206ENST00000421141 CEP170Q5SW79 1584 aa13.36□□□□□ -0.27
PTCH1-206ENST00000421141 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
PTCH1-206ENST00000421141 ABCC5O15440 1437 aa13.36□□□□□ -0.27
PTCH1-206ENST00000421141 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
PTCH1-206ENST00000421141 CEBPAP49715 358 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-206ENST00000421141 GNAI1P63096 354 aa13.35□□□□□ -0.27
PTCH1-206ENST00000421141 CLUAP1Q96AJ1 413 aa13.35□□□□□ -0.27
PTCH1-206ENST00000421141 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
PTCH1-206ENST00000421141 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
PTCH1-206ENST00000421141 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
PTCH1-206ENST00000421141 MSH6P52701 1360 aa13.35□□□□□ -0.27
PTCH1-206ENST00000421141 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
PTCH1-206ENST00000421141 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
PTCH1-206ENST00000421141 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
PTCH1-206ENST00000421141 KIF1BO60333 1816 aa13.33□□□□□ -0.27
PTCH1-206ENST00000421141 CCDC7Q96M83 1385 aa13.33□□□□□ -0.27
PTCH1-206ENST00000421141 FKBP5Q13451 457 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-206ENST00000421141 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-206ENST00000421141 GOLGA6L6A8MZA4 724 aa13.33□□□□□ -0.28
PTCH1-206ENST00000421141 CABP4P57796 275 aa13.33□□□□□ -0.28
PTCH1-206ENST00000421141 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
PTCH1-206ENST00000421141 CCDC61Q9Y6R9 512 aa13.33□□□□□ -0.28
PTCH1-206ENST00000421141 DDX54Q8TDD1 881 aaKnown RBP13.32□□□□□ -0.28
PTCH1-206ENST00000421141 PRKRIP1Q9H875 184 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-206ENST00000421141 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
PTCH1-206ENST00000421141 MTHFSP49914 203 aa13.32□□□□□ -0.28
PTCH1-206ENST00000421141 CADPS2Q86UW7 1296 aa13.32□□□□□ -0.28
PTCH1-206ENST00000421141 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
PTCH1-206ENST00000421141 TOM1O60784 492 aa13.31□□□□□ -0.28
PTCH1-206ENST00000421141 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
PTCH1-206ENST00000421141 NUP153P49790 1475 aaKnown RBP13.31□□□□□ -0.28
PTCH1-206ENST00000421141 TOMM22Q9NS69 142 aa13.31□□□□□ -0.28
PTCH1-206ENST00000421141 NAIPQ13075 1403 aa13.31□□□□□ -0.28
PTCH1-206ENST00000421141 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
PTCH1-206ENST00000421141 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
PTCH1-206ENST00000421141 APAF1O14727 1248 aa13.31□□□□□ -0.28
PTCH1-206ENST00000421141 FBXO31Q5XUX0 539 aaPredicted RBP13.31□□□□□ -0.28
PTCH1-206ENST00000421141 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
PTCH1-206ENST00000421141 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-206ENST00000421141 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
PTCH1-206ENST00000421141 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
PTCH1-206ENST00000421141 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-206ENST00000421141 AIMP1Q12904 312 aaKnown RBP13.29□□□□□ -0.28
PTCH1-206ENST00000421141 ERICH6BQ5W0A0 696 aa13.29□□□□□ -0.28
PTCH1-206ENST00000421141 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
PTCH1-206ENST00000421141 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
PTCH1-206ENST00000421141 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
PTCH1-206ENST00000421141 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
PTCH1-206ENST00000421141 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-206ENST00000421141 CCDC30Q5VVM6 783 aa13.28□□□□□ -0.28
PTCH1-206ENST00000421141 BCL2L13Q9BXK5 485 aa13.28□□□□□ -0.28
PTCH1-206ENST00000421141 NUP160Q12769 1436 aa13.28□□□□□ -0.28
PTCH1-206ENST00000421141 G3BP1Q13283 466 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCH1-206ENST00000421141 IDI1Q13907 227 aa13.28□□□□□ -0.28
PTCH1-206ENST00000421141 SLC12A5Q9H2X9 1139 aa13.28□□□□□ -0.28
PTCH1-206ENST00000421141 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
PTCH1-206ENST00000421141 ADAMTS2O95450 1211 aa13.27□□□□□ -0.28
PTCH1-206ENST00000421141 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.29
PTCH1-206ENST00000421141 EIF2AK4Q9P2K8 1649 aaKnown RBP13.27□□□□□ -0.29
PTCH1-206ENST00000421141 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
PTCH1-206ENST00000421141 WAPLQ7Z5K2 1190 aa13.26□□□□□ -0.29
PTCH1-206ENST00000421141 UBAP1LF5GYI3 381 aa13.26□□□□□ -0.29
PTCH1-206ENST00000421141 PNISRQ8TF01 805 aaKnown RBP13.26□□□□□ -0.29
PTCH1-206ENST00000421141 DDX19BQ9UMR2 479 aa13.26□□□□□ -0.29
PTCH1-206ENST00000421141 IFIT2P09913 472 aaKnown RBP13.26□□□□□ -0.29
PTCH1-206ENST00000421141 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
PTCH1-206ENST00000421141 NRDCO43847 1150 aa13.25□□□□□ -0.29
PTCH1-206ENST00000421141 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
PTCH1-206ENST00000421141 CHMP4CQ96CF2 233 aa13.25□□□□□ -0.29
PTCH1-206ENST00000421141 KIF3AQ9Y496 699 aa13.25□□□□□ -0.29
PTCH1-206ENST00000421141 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
PTCH1-206ENST00000421141 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
PTCH1-206ENST00000421141 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-206ENST00000421141 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
PTCH1-206ENST00000421141 SULT6B1Q6IMI4 303 aa13.24□□□□□ -0.29
PTCH1-206ENST00000421141 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
PTCH1-206ENST00000421141 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-206ENST00000421141 HSP90AB4PQ58FF6 505 aa13.24□□□□□ -0.29
PTCH1-206ENST00000421141 ZCCHC11Q5TAX3 1644 aaKnown RBP13.23□□□□□ -0.29
PTCH1-206ENST00000421141 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
PTCH1-206ENST00000421141 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
PTCH1-206ENST00000421141 APPP05067 770 aa13.23□□□□□ -0.29
PTCH1-206ENST00000421141 ATP7AQ04656 1500 aa13.23□□□□□ -0.29
PTCH1-206ENST00000421141 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
PTCH1-206ENST00000421141 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
PTCH1-206ENST00000421141 TCEAL9Q9UHQ7 104 aa13.23□□□□□ -0.29
PTCH1-206ENST00000421141 NOS1P29475 1434 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 UHRF1BP1Q6BDS2 1440 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 ATP10AO60312 1499 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 SYNE3Q6ZMZ3 975 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
PTCH1-206ENST00000421141 FOXO3O43524 673 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 RAD21O60216 631 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
PTCH1-206ENST00000421141 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms