RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 SPATA31D1Q6ZQQ2 1576 aa25.06■■□□□ 1.6
CROCCP3-202ENST00000420820 ANKRD36BQ8N2N9 1353 aa25.05■■□□□ 1.6
CROCCP3-202ENST00000420820 EXOC6Q8TAG9 804 aa25.04■■□□□ 1.6
CROCCP3-202ENST00000420820 FANCIQ9NVI1 1328 aa25.04■■□□□ 1.6
CROCCP3-202ENST00000420820 TRMT2AQ8IZ69 625 aaKnown RBP25.03■■□□□ 1.6
CROCCP3-202ENST00000420820 GOLGA2Q08379 1002 aa25.02■■□□□ 1.6
CROCCP3-202ENST00000420820 ALKQ9UM73 1620 aa25.02■■□□□ 1.6
CROCCP3-202ENST00000420820 NGEFQ8N5V2 710 aa25.02■■□□□ 1.6
CROCCP3-202ENST00000420820 ARHGEF40Q8TER5 1519 aa25.01■■□□□ 1.59
CROCCP3-202ENST00000420820 NSD2O96028 1365 aa25.01■■□□□ 1.59
CROCCP3-202ENST00000420820 NINLQ9Y2I6 1382 aa25.01■■□□□ 1.59
CROCCP3-202ENST00000420820 MORC1Q86VD1 984 aa25■■□□□ 1.59
CROCCP3-202ENST00000420820 YTHDC2Q9H6S0 1430 aaKnown RBP25■■□□□ 1.59
CROCCP3-202ENST00000420820 SLFN5Q08AF3 891 aa25■■□□□ 1.59
CROCCP3-202ENST00000420820 CGNL1Q0VF96 1302 aa25■■□□□ 1.59
CROCCP3-202ENST00000420820 CCDC146Q8IYE0 955 aa24.98■■□□□ 1.59
CROCCP3-202ENST00000420820 A2ML1A8K2U0 1454 aa24.97■■□□□ 1.59
CROCCP3-202ENST00000420820 APAF1O14727 1248 aa24.97■■□□□ 1.59
CROCCP3-202ENST00000420820 SETD1AO15047 1707 aaKnown RBP24.96■■□□□ 1.59
CROCCP3-202ENST00000420820 CABP2Q9NPB3 220 aa24.95■■□□□ 1.58
CROCCP3-202ENST00000420820 PLIN1O60240 522 aa24.93■■□□□ 1.58
CROCCP3-202ENST00000420820 STK26Q9P289 416 aa24.93■■□□□ 1.58
CROCCP3-202ENST00000420820 DLC1Q96QB1 1528 aa24.92■■□□□ 1.58
CROCCP3-202ENST00000420820 ABCC11Q96J66 1382 aa24.92■■□□□ 1.58
CROCCP3-202ENST00000420820 ATAD2Q6PL18 1390 aa24.92■■□□□ 1.58
CROCCP3-202ENST00000420820 A0A1W2PP64 1363 aa24.9■■□□□ 1.58
CROCCP3-202ENST00000420820 ANKRD26Q9UPS8 1709 aa24.9■■□□□ 1.58
CROCCP3-202ENST00000420820 IQSEC2Q5JU85 1478 aa24.9■■□□□ 1.58
CROCCP3-202ENST00000420820 PRAM1Q96QH2 718 aa24.9■■□□□ 1.58
CROCCP3-202ENST00000420820 SPINK5Q9NQ38 1064 aaPredicted RBP24.9■■□□□ 1.58
CROCCP3-202ENST00000420820 NKTRP30414 1462 aaKnown RBP24.89■■□□□ 1.58
CROCCP3-202ENST00000420820 CD163L1Q9NR16 1453 aa24.89■■□□□ 1.58
CROCCP3-202ENST00000420820 SAFB2Q14151 953 aaKnown RBP eCLIP24.89■■□□□ 1.58
CROCCP3-202ENST00000420820 CRBNQ96SW2 442 aa24.88■■□□□ 1.57
CROCCP3-202ENST00000420820 RIMS2Q9UQ26 1411 aa24.88■■□□□ 1.57
CROCCP3-202ENST00000420820 E9PSI1 815 aa24.88■■□□□ 1.57
CROCCP3-202ENST00000420820 MYT1Q01538 1121 aa24.88■■□□□ 1.57
CROCCP3-202ENST00000420820 MED14O60244 1454 aa24.88■■□□□ 1.57
CROCCP3-202ENST00000420820 MTHFSP49914 203 aa24.87■■□□□ 1.57
CROCCP3-202ENST00000420820 MSH5O43196 834 aa24.86■■□□□ 1.57
CROCCP3-202ENST00000420820 STAG3Q9UJ98 1225 aa24.86■■□□□ 1.57
CROCCP3-202ENST00000420820 NRXN3Q9Y4C0 1643 aa24.85■■□□□ 1.57
CROCCP3-202ENST00000420820 TNNT2P45379 298 aaPredicted RBP24.85■■□□□ 1.57
CROCCP3-202ENST00000420820 SRPK2P78362 688 aaKnown RBP24.85■■□□□ 1.57
CROCCP3-202ENST00000420820 ANP32EQ9BTT0 268 aa24.85■■□□□ 1.57
CROCCP3-202ENST00000420820 NLRP1Q9C000 1473 aa24.85■■□□□ 1.57
CROCCP3-202ENST00000420820 RUNDC1Q96C34 613 aa24.84■■□□□ 1.57
CROCCP3-202ENST00000420820 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
CROCCP3-202ENST00000420820 MINK1Q8N4C8 1332 aaPredicted RBP24.84■■□□□ 1.57
CROCCP3-202ENST00000420820 C20orf194Q5TEA3 1177 aa24.84■■□□□ 1.57
CROCCP3-202ENST00000420820 POGKQ9P215 609 aa24.84■■□□□ 1.57
CROCCP3-202ENST00000420820 DMRT2Q9Y5R5 561 aa24.84■■□□□ 1.57
CROCCP3-202ENST00000420820 NCBP3Q53F19 620 aaKnown RBP24.83■■□□□ 1.57
CROCCP3-202ENST00000420820 WWC1Q8IX03 1113 aa24.83■■□□□ 1.57
CROCCP3-202ENST00000420820 CFAP53Q96M91 514 aa24.83■■□□□ 1.57
CROCCP3-202ENST00000420820 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
CROCCP3-202ENST00000420820 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
CROCCP3-202ENST00000420820 TERF2IPQ9NYB0 399 aa24.8■■□□□ 1.56
CROCCP3-202ENST00000420820 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.8■■□□□ 1.56
CROCCP3-202ENST00000420820 MLECQ14165 292 aa24.79■■□□□ 1.56
CROCCP3-202ENST00000420820 ADGRB2O60241 1585 aa24.79■■□□□ 1.56
CROCCP3-202ENST00000420820 COL3A1P02461 1466 aaPredicted RBP24.78■■□□□ 1.56
CROCCP3-202ENST00000420820 CDK19Q9BWU1 502 aa24.78■■□□□ 1.56
CROCCP3-202ENST00000420820 CCDC27Q2M243 656 aa24.78■■□□□ 1.56
CROCCP3-202ENST00000420820 KIF20BQ96Q89 1820 aa24.77■■□□□ 1.56
CROCCP3-202ENST00000420820 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
CROCCP3-202ENST00000420820 FYB1O15117 783 aa24.76■■□□□ 1.55
CROCCP3-202ENST00000420820 TCP11L2Q8N4U5 519 aa24.76■■□□□ 1.55
CROCCP3-202ENST00000420820 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
CROCCP3-202ENST00000420820 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.74■■□□□ 1.55
CROCCP3-202ENST00000420820 WDR63Q8IWG1 891 aa24.74■■□□□ 1.55
CROCCP3-202ENST00000420820 KDM2BQ8NHM5 1336 aa24.74■■□□□ 1.55
CROCCP3-202ENST00000420820 ATP7BP35670 1465 aa24.73■■□□□ 1.55
CROCCP3-202ENST00000420820 GGNBP2Q9H3C7 697 aa24.73■■□□□ 1.55
CROCCP3-202ENST00000420820 MS4A1P11836 297 aa24.72■■□□□ 1.55
CROCCP3-202ENST00000420820 HDGFL2Q7Z4V5 671 aaPredicted RBP24.71■■□□□ 1.55
CROCCP3-202ENST00000420820 UBR1Q8IWV7 1749 aa24.7■■□□□ 1.55
CROCCP3-202ENST00000420820 TECPR2O15040 1411 aa24.7■■□□□ 1.54
CROCCP3-202ENST00000420820 WAPLQ7Z5K2 1190 aa24.7■■□□□ 1.54
CROCCP3-202ENST00000420820 CABP1Q9NZU7 370 aa24.7■■□□□ 1.54
CROCCP3-202ENST00000420820 BCAR3O75815 825 aa24.69■■□□□ 1.54
CROCCP3-202ENST00000420820 METP08581 1390 aa24.69■■□□□ 1.54
CROCCP3-202ENST00000420820 PNPLA6Q8IY17 1366 aa24.69■■□□□ 1.54
CROCCP3-202ENST00000420820 TNRQ92752 1358 aa24.69■■□□□ 1.54
CROCCP3-202ENST00000420820 SIRT1Q96EB6 747 aa24.69■■□□□ 1.54
CROCCP3-202ENST00000420820 RRP7AQ9Y3A4 280 aaKnown RBP24.68■■□□□ 1.54
CROCCP3-202ENST00000420820 ESF1Q9H501 851 aaKnown RBP24.67■■□□□ 1.54
CROCCP3-202ENST00000420820 FAM135BQ49AJ0 1406 aa24.67■■□□□ 1.54
CROCCP3-202ENST00000420820 U2AF1L5P0DN76 240 aaPredicted RBP24.67■■□□□ 1.54
CROCCP3-202ENST00000420820 U2AF1Q01081 240 aaKnown RBP eCLIP24.67■■□□□ 1.54
CROCCP3-202ENST00000420820 CPS1P31327 1500 aa24.66■■□□□ 1.54
CROCCP3-202ENST00000420820 PLEKHF1Q96S99 279 aa24.66■■□□□ 1.54
CROCCP3-202ENST00000420820 CPSF1Q10570 1443 aaKnown RBP24.65■■□□□ 1.54
CROCCP3-202ENST00000420820 NEUROD2Q15784 382 aa24.65■■□□□ 1.54
CROCCP3-202ENST00000420820 CENPQQ7L2Z9 268 aaPredicted RBP24.65■■□□□ 1.54
CROCCP3-202ENST00000420820 CDC42BPGQ6DT37 1551 aa24.64■■□□□ 1.54
CROCCP3-202ENST00000420820 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.53
CROCCP3-202ENST00000420820 PDE3AQ14432 1141 aa24.64■■□□□ 1.53
CROCCP3-202ENST00000420820 TMEM2Q9UHN6 1383 aa24.63■■□□□ 1.53
CROCCP3-202ENST00000420820 WASLO00401 505 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms