RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 STK26Q9P289 416 aa20.75■□□□□ 0.91
PTPN18-204ENST00000420717 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
PTPN18-204ENST00000420717 AHDC1Q5TGY3 1603 aaPredicted RBP20.74■□□□□ 0.91
PTPN18-204ENST00000420717 ATF3P18847 181 aa20.73■□□□□ 0.91
PTPN18-204ENST00000420717 NHSL1Q5SYE7 1610 aa20.72■□□□□ 0.91
PTPN18-204ENST00000420717 WAPLQ7Z5K2 1190 aa20.72■□□□□ 0.91
PTPN18-204ENST00000420717 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
PTPN18-204ENST00000420717 NBPF1Q3BBV0 1214 aa20.71■□□□□ 0.91
PTPN18-204ENST00000420717 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
PTPN18-204ENST00000420717 C1orf167Q5SNV9 1468 aa20.7■□□□□ 0.9
PTPN18-204ENST00000420717 PRAM1Q96QH2 718 aa20.7■□□□□ 0.9
PTPN18-204ENST00000420717 ROCK2O75116 1388 aaKnown RBP20.69■□□□□ 0.9
PTPN18-204ENST00000420717 QRICH2Q9H0J4 1663 aa20.68■□□□□ 0.9
PTPN18-204ENST00000420717 PIP4K2BP78356 416 aa20.68■□□□□ 0.9
PTPN18-204ENST00000420717 TRAK1Q9UPV9 953 aa20.68■□□□□ 0.9
PTPN18-204ENST00000420717 COL16A1Q07092 1604 aaPredicted RBP20.67■□□□□ 0.9
PTPN18-204ENST00000420717 USP32Q8NFA0 1604 aa20.67■□□□□ 0.9
PTPN18-204ENST00000420717 CCER1Q8TC90 406 aaPredicted RBP20.67■□□□□ 0.9
PTPN18-204ENST00000420717 ANKARQ7Z5J8 1434 aa20.66■□□□□ 0.9
PTPN18-204ENST00000420717 KIF1AQ12756 1690 aa20.66■□□□□ 0.9
PTPN18-204ENST00000420717 PHLPP1O60346 1717 aa20.65■□□□□ 0.9
PTPN18-204ENST00000420717 TULP4Q9NRJ4 1543 aa20.65■□□□□ 0.9
PTPN18-204ENST00000420717 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
PTPN18-204ENST00000420717 BRINP3Q76B58 766 aa20.63■□□□□ 0.89
PTPN18-204ENST00000420717 POGKQ9P215 609 aa20.63■□□□□ 0.89
PTPN18-204ENST00000420717 SBNO2Q9Y2G9 1366 aa20.62■□□□□ 0.89
PTPN18-204ENST00000420717 SCAF1Q9H7N4 1312 aaKnown RBP20.62■□□□□ 0.89
PTPN18-204ENST00000420717 TOPAZ1Q8N9V7 1692 aa20.62■□□□□ 0.89
PTPN18-204ENST00000420717 HSPA1LP34931 641 aa20.62■□□□□ 0.89
PTPN18-204ENST00000420717 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
PTPN18-204ENST00000420717 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
PTPN18-204ENST00000420717 RGPD8O14715 1765 aaPredicted RBP20.6■□□□□ 0.89
PTPN18-204ENST00000420717 ATP7BP35670 1465 aa20.59■□□□□ 0.89
PTPN18-204ENST00000420717 SHPRHQ149N8 1683 aa20.58■□□□□ 0.88
PTPN18-204ENST00000420717 WASLO00401 505 aaPredicted RBP20.56■□□□□ 0.88
PTPN18-204ENST00000420717 SAFB2Q14151 953 aaKnown RBP eCLIP20.56■□□□□ 0.88
PTPN18-204ENST00000420717 MINK1Q8N4C8 1332 aaPredicted RBP20.55■□□□□ 0.88
PTPN18-204ENST00000420717 PXDNQ92626 1479 aa20.55■□□□□ 0.88
PTPN18-204ENST00000420717 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
PTPN18-204ENST00000420717 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
PTPN18-204ENST00000420717 SOS2Q07890 1332 aaPredicted RBP20.52■□□□□ 0.87
PTPN18-204ENST00000420717 PRR36Q9H6K5 1346 aa20.52■□□□□ 0.87
PTPN18-204ENST00000420717 HIRIP3Q9BW71 556 aaPredicted RBP20.51■□□□□ 0.87
PTPN18-204ENST00000420717 NPHP3Q7Z494 1330 aa20.5■□□□□ 0.87
PTPN18-204ENST00000420717 COL22A1Q8NFW1 1626 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-204ENST00000420717 JCADQ9P266 1359 aa20.49■□□□□ 0.87
PTPN18-204ENST00000420717 TRPM3Q9HCF6 1732 aaPredicted RBP20.48■□□□□ 0.87
PTPN18-204ENST00000420717 ESCO1Q5FWF5 840 aa20.48■□□□□ 0.87
PTPN18-204ENST00000420717 MED1Q15648 1581 aaPredicted RBP20.47■□□□□ 0.87
PTPN18-204ENST00000420717 USP47Q96K76 1375 aa20.46■□□□□ 0.87
PTPN18-204ENST00000420717 CDK19Q9BWU1 502 aa20.46■□□□□ 0.87
PTPN18-204ENST00000420717 PHF8Q9UPP1 1060 aa20.45■□□□□ 0.86
PTPN18-204ENST00000420717 POLR3AO14802 1390 aaPredicted RBP20.45■□□□□ 0.86
PTPN18-204ENST00000420717 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
PTPN18-204ENST00000420717 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
PTPN18-204ENST00000420717 ALS2Q96Q42 1657 aa20.43■□□□□ 0.86
PTPN18-204ENST00000420717 NUDT16Q96DE0 195 aaKnown RBP20.43■□□□□ 0.86
PTPN18-204ENST00000420717 PNPLA6Q8IY17 1366 aa20.43■□□□□ 0.86
PTPN18-204ENST00000420717 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
PTPN18-204ENST00000420717 TESK2Q96S53 571 aa20.42■□□□□ 0.86
PTPN18-204ENST00000420717 SBNO1A3KN83 1393 aa20.42■□□□□ 0.86
PTPN18-204ENST00000420717 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
PTPN18-204ENST00000420717 CCDC61Q9Y6R9 512 aa20.41■□□□□ 0.86
PTPN18-204ENST00000420717 SPATA31A6Q5VVP1 1343 aa20.41■□□□□ 0.86
PTPN18-204ENST00000420717 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
PTPN18-204ENST00000420717 FOXO3O43524 673 aa20.4■□□□□ 0.86
PTPN18-204ENST00000420717 TNS3Q68CZ2 1445 aa20.4■□□□□ 0.86
PTPN18-204ENST00000420717 ATAD2Q6PL18 1390 aa20.4■□□□□ 0.86
PTPN18-204ENST00000420717 DDX17Q92841 729 aaKnown RBP20.4■□□□□ 0.86
PTPN18-204ENST00000420717 PUS7Q96PZ0 661 aaKnown RBP20.4■□□□□ 0.86
PTPN18-204ENST00000420717 AKAP12Q02952 1782 aa20.39■□□□□ 0.86
PTPN18-204ENST00000420717 PPIP5K1Q6PFW1 1433 aa20.39■□□□□ 0.85
PTPN18-204ENST00000420717 ST20-MTHFSA0A0A6YYL1 179 aa20.38■□□□□ 0.85
PTPN18-204ENST00000420717 ABCA3Q99758 1704 aa20.38■□□□□ 0.85
PTPN18-204ENST00000420717 LRP6O75581 1613 aa20.38■□□□□ 0.85
PTPN18-204ENST00000420717 SRPK2P78362 688 aaKnown RBP20.37■□□□□ 0.85
PTPN18-204ENST00000420717 NRKQ7Z2Y5 1582 aa20.37■□□□□ 0.85
PTPN18-204ENST00000420717 CRYBG1Q9Y4K1 1723 aa20.36■□□□□ 0.85
PTPN18-204ENST00000420717 BRD4O60885 1362 aaPredicted RBP20.36■□□□□ 0.85
PTPN18-204ENST00000420717 SPATA31A3Q5VYP0 1347 aa20.36■□□□□ 0.85
PTPN18-204ENST00000420717 CABP2Q9NPB3 220 aa20.36■□□□□ 0.85
PTPN18-204ENST00000420717 MON2Q7Z3U7 1717 aa20.36■□□□□ 0.85
PTPN18-204ENST00000420717 PMFBP1Q8TBY8 1022 aa20.34■□□□□ 0.85
PTPN18-204ENST00000420717 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
PTPN18-204ENST00000420717 NINLQ9Y2I6 1382 aa20.34■□□□□ 0.85
PTPN18-204ENST00000420717 MARF1Q9Y4F3 1742 aaKnown RBP20.33■□□□□ 0.85
PTPN18-204ENST00000420717 PSME1Q06323 249 aa20.33■□□□□ 0.85
PTPN18-204ENST00000420717 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.85
PTPN18-204ENST00000420717 CPSF1Q10570 1443 aaKnown RBP20.33■□□□□ 0.84
PTPN18-204ENST00000420717 SSH2Q76I76 1423 aa20.32■□□□□ 0.84
PTPN18-204ENST00000420717 DISP3Q9P2K9 1392 aa20.32■□□□□ 0.84
PTPN18-204ENST00000420717 CD163L1Q9NR16 1453 aa20.31■□□□□ 0.84
PTPN18-204ENST00000420717 ACEP12821 1306 aa20.31■□□□□ 0.84
PTPN18-204ENST00000420717 USP6P35125 1406 aa20.31■□□□□ 0.84
PTPN18-204ENST00000420717 MYOM1P52179 1685 aa20.3■□□□□ 0.84
PTPN18-204ENST00000420717 XPCQ01831 940 aaPredicted RBP20.3■□□□□ 0.84
PTPN18-204ENST00000420717 NGDNQ8NEJ9 315 aaKnown RBP20.3■□□□□ 0.84
PTPN18-204ENST00000420717 USP54Q70EL1 1684 aa20.29■□□□□ 0.84
PTPN18-204ENST00000420717 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.84
PTPN18-204ENST00000420717 TMF1P82094 1093 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms