RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 COG6Q9Y2V7 657 aa12.8□□□□□ -0.36
CDV3-202ENST00000420115 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
CDV3-202ENST00000420115 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
CDV3-202ENST00000420115 PPP4R3BQ5MIZ7 849 aa12.79□□□□□ -0.36
CDV3-202ENST00000420115 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
CDV3-202ENST00000420115 IQGAP1P46940 1657 aa12.79□□□□□ -0.36
CDV3-202ENST00000420115 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
CDV3-202ENST00000420115 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
CDV3-202ENST00000420115 TPM2P07951 284 aa12.78□□□□□ -0.36
CDV3-202ENST00000420115 RIPK4P57078 832 aa12.77□□□□□ -0.36
CDV3-202ENST00000420115 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.36
CDV3-202ENST00000420115 JPH4Q96JJ6 628 aa12.77□□□□□ -0.36
CDV3-202ENST00000420115 CDC42BPBQ9Y5S2 1711 aa12.77□□□□□ -0.36
CDV3-202ENST00000420115 PREX2Q70Z35 1606 aa12.77□□□□□ -0.37
CDV3-202ENST00000420115 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
CDV3-202ENST00000420115 IGSF3O75054 1194 aa12.76□□□□□ -0.37
CDV3-202ENST00000420115 MCM4P33991 863 aa12.76□□□□□ -0.37
CDV3-202ENST00000420115 MYOM1P52179 1685 aa12.76□□□□□ -0.37
CDV3-202ENST00000420115 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
CDV3-202ENST00000420115 MADDQ8WXG6 1647 aa12.76□□□□□ -0.37
CDV3-202ENST00000420115 TRIM44Q96DX7 344 aaPredicted RBP12.76□□□□□ -0.37
CDV3-202ENST00000420115 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
CDV3-202ENST00000420115 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
CDV3-202ENST00000420115 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
CDV3-202ENST00000420115 ZBTB9Q96C00 473 aa12.74□□□□□ -0.37
CDV3-202ENST00000420115 SYCP2Q9BX26 1530 aa12.74□□□□□ -0.37
CDV3-202ENST00000420115 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
CDV3-202ENST00000420115 R3HCC1Q9Y3T6 440 aaKnown RBP12.74□□□□□ -0.37
CDV3-202ENST00000420115 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
CDV3-202ENST00000420115 PDZRN3Q9UPQ7 1066 aa12.73□□□□□ -0.37
CDV3-202ENST00000420115 CDK11BP21127 795 aaKnown RBP12.73□□□□□ -0.37
CDV3-202ENST00000420115 SCAPERQ9BY12 1400 aa12.73□□□□□ -0.37
CDV3-202ENST00000420115 SMAP1Q8IYB5 467 aaPredicted RBP12.73□□□□□ -0.37
CDV3-202ENST00000420115 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
CDV3-202ENST00000420115 TRAK2O60296 914 aa12.72□□□□□ -0.37
CDV3-202ENST00000420115 MRE11P49959 708 aa12.72□□□□□ -0.37
CDV3-202ENST00000420115 CHMP5Q9NZZ3 219 aa12.72□□□□□ -0.37
CDV3-202ENST00000420115 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
CDV3-202ENST00000420115 KDM5AP29375 1690 aaKnown RBP12.71□□□□□ -0.38
CDV3-202ENST00000420115 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
CDV3-202ENST00000420115 RLBP1P12271 317 aa12.7□□□□□ -0.38
CDV3-202ENST00000420115 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
CDV3-202ENST00000420115 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
CDV3-202ENST00000420115 FBLN2P98095 1184 aa12.7□□□□□ -0.38
CDV3-202ENST00000420115 DNTTIP2Q5QJE6 756 aaKnown RBP12.7□□□□□ -0.38
CDV3-202ENST00000420115 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
CDV3-202ENST00000420115 SPHKAPQ2M3C7 1700 aa12.69□□□□□ -0.38
CDV3-202ENST00000420115 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
CDV3-202ENST00000420115 POLR3AO14802 1390 aaPredicted RBP12.68□□□□□ -0.38
CDV3-202ENST00000420115 C22orf23Q9BZE7 217 aa12.68□□□□□ -0.38
CDV3-202ENST00000420115 RTEL1-TNFRSF6BF6WH68 1400 aa12.68□□□□□ -0.38
CDV3-202ENST00000420115 ARHGAP5Q13017 1502 aa12.68□□□□□ -0.38
CDV3-202ENST00000420115 CBX1P83916 185 aa12.68□□□□□ -0.38
CDV3-202ENST00000420115 TTC37Q6PGP7 1564 aa12.68□□□□□ -0.38
CDV3-202ENST00000420115 CEP152O94986 1710 aa12.68□□□□□ -0.38
CDV3-202ENST00000420115 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
CDV3-202ENST00000420115 DMTNQ08495 405 aa12.67□□□□□ -0.38
CDV3-202ENST00000420115 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
CDV3-202ENST00000420115 TNNQ9UQP3 1299 aa12.67□□□□□ -0.38
CDV3-202ENST00000420115 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
CDV3-202ENST00000420115 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
CDV3-202ENST00000420115 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
CDV3-202ENST00000420115 CARD14Q9BXL6 1004 aa12.67□□□□□ -0.38
CDV3-202ENST00000420115 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
CDV3-202ENST00000420115 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.38
CDV3-202ENST00000420115 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
CDV3-202ENST00000420115 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
CDV3-202ENST00000420115 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
CDV3-202ENST00000420115 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
CDV3-202ENST00000420115 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 TRPM2O94759 1503 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 UQCRHLA0A096LP55 91 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 UQCRHP07919 91 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
CDV3-202ENST00000420115 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
CDV3-202ENST00000420115 ERVK-7P63135 1459 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 ERCC6Q03468 1493 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
CDV3-202ENST00000420115 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
CDV3-202ENST00000420115 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
CDV3-202ENST00000420115 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
CDV3-202ENST00000420115 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
CDV3-202ENST00000420115 TSC1Q92574 1164 aa12.63□□□□□ -0.39
CDV3-202ENST00000420115 KIAA1210Q9ULL0 1709 aa12.63□□□□□ -0.39
CDV3-202ENST00000420115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
CDV3-202ENST00000420115 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
CDV3-202ENST00000420115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDV3-202ENST00000420115 DDIT3P35638 169 aa12.62□□□□□ -0.39
CDV3-202ENST00000420115 KANK1Q14678 1352 aa12.62□□□□□ -0.39
CDV3-202ENST00000420115 CCDC27Q2M243 656 aa12.61□□□□□ -0.39
CDV3-202ENST00000420115 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
CDV3-202ENST00000420115 PTPRTO14522 1441 aa12.6□□□□□ -0.39
CDV3-202ENST00000420115 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
CDV3-202ENST00000420115 XPCQ01831 940 aaPredicted RBP12.6□□□□□ -0.39
CDV3-202ENST00000420115 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
CDV3-202ENST00000420115 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
CDV3-202ENST00000420115 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms