RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
NUP50-205ENST00000419387 LRP6O75581 1613 aa13.94□□□□□ -0.18
NUP50-205ENST00000419387 NUTM2BA6NNL0 878 aaPredicted RBP13.94□□□□□ -0.18
NUP50-205ENST00000419387 NUTM2EB1AL46 878 aaPredicted RBP13.94□□□□□ -0.18
NUP50-205ENST00000419387 NUTM2AQ8IVF1 878 aaPredicted RBP13.94□□□□□ -0.18
NUP50-205ENST00000419387 ORAI2Q96SN7 254 aa13.94□□□□□ -0.18
NUP50-205ENST00000419387 STK26Q9P289 416 aa13.94□□□□□ -0.18
NUP50-205ENST00000419387 TMEM132EQ6IEE7 984 aa13.93□□□□□ -0.18
NUP50-205ENST00000419387 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
NUP50-205ENST00000419387 ZNF772Q68DY9 489 aaPredicted RBP13.92□□□□□ -0.18
NUP50-205ENST00000419387 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
NUP50-205ENST00000419387 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
NUP50-205ENST00000419387 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
NUP50-205ENST00000419387 ABCC11Q96J66 1382 aa13.92□□□□□ -0.18
NUP50-205ENST00000419387 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
NUP50-205ENST00000419387 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
NUP50-205ENST00000419387 HRCP23327 699 aa13.91□□□□□ -0.18
NUP50-205ENST00000419387 C14orf93Q9H972 538 aaKnown RBP13.91□□□□□ -0.18
NUP50-205ENST00000419387 TECPR2O15040 1411 aa13.9□□□□□ -0.19
NUP50-205ENST00000419387 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
NUP50-205ENST00000419387 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
NUP50-205ENST00000419387 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
NUP50-205ENST00000419387 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
NUP50-205ENST00000419387 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
NUP50-205ENST00000419387 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
NUP50-205ENST00000419387 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
NUP50-205ENST00000419387 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
NUP50-205ENST00000419387 LAMC1P11047 1609 aa13.86□□□□□ -0.19
NUP50-205ENST00000419387 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
NUP50-205ENST00000419387 CDC42BPGQ6DT37 1551 aa13.86□□□□□ -0.19
NUP50-205ENST00000419387 AFF2P51816 1311 aa13.86□□□□□ -0.19
NUP50-205ENST00000419387 NPHP3Q7Z494 1330 aa13.86□□□□□ -0.19
NUP50-205ENST00000419387 MYOM2P54296 1465 aa13.86□□□□□ -0.19
NUP50-205ENST00000419387 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
NUP50-205ENST00000419387 RXRBP28702 533 aa13.85□□□□□ -0.19
NUP50-205ENST00000419387 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
NUP50-205ENST00000419387 FOXO3O43524 673 aa13.84□□□□□ -0.19
NUP50-205ENST00000419387 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
NUP50-205ENST00000419387 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
NUP50-205ENST00000419387 CAPN15O75808 1086 aa13.82□□□□□ -0.2
NUP50-205ENST00000419387 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
NUP50-205ENST00000419387 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
NUP50-205ENST00000419387 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
NUP50-205ENST00000419387 QTRT2Q9H974 415 aaKnown RBP13.82□□□□□ -0.2
NUP50-205ENST00000419387 KDM2AQ9Y2K7 1162 aa13.82□□□□□ -0.2
NUP50-205ENST00000419387 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
NUP50-205ENST00000419387 PRAM1Q96QH2 718 aa13.81□□□□□ -0.2
NUP50-205ENST00000419387 DSG3P32926 999 aa13.8□□□□□ -0.2
NUP50-205ENST00000419387 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUP50-205ENST00000419387 POGKQ9P215 609 aa13.8□□□□□ -0.2
NUP50-205ENST00000419387 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
NUP50-205ENST00000419387 PXDNQ92626 1479 aa13.79□□□□□ -0.2
NUP50-205ENST00000419387 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
NUP50-205ENST00000419387 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
NUP50-205ENST00000419387 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
NUP50-205ENST00000419387 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
NUP50-205ENST00000419387 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.21
NUP50-205ENST00000419387 DLC1Q96QB1 1528 aa13.77□□□□□ -0.21
NUP50-205ENST00000419387 CDK12Q9NYV4 1490 aaPredicted RBP13.77□□□□□ -0.21
NUP50-205ENST00000419387 USP21Q9UK80 565 aa13.77□□□□□ -0.21
NUP50-205ENST00000419387 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
NUP50-205ENST00000419387 COL22A1Q8NFW1 1626 aaPredicted RBP13.76□□□□□ -0.21
NUP50-205ENST00000419387 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
NUP50-205ENST00000419387 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
NUP50-205ENST00000419387 PSME1Q06323 249 aa13.75□□□□□ -0.21
NUP50-205ENST00000419387 UPF1Q92900 1129 aaKnown RBP eCLIP13.75□□□□□ -0.21
NUP50-205ENST00000419387 TRPC5Q9UL62 973 aaPredicted RBP13.75□□□□□ -0.21
NUP50-205ENST00000419387 KIF1AQ12756 1690 aa13.74□□□□□ -0.21
NUP50-205ENST00000419387 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
NUP50-205ENST00000419387 MINK1Q8N4C8 1332 aaPredicted RBP13.72□□□□□ -0.21
NUP50-205ENST00000419387 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
NUP50-205ENST00000419387 ANKARQ7Z5J8 1434 aa13.72□□□□□ -0.21
NUP50-205ENST00000419387 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.21
NUP50-205ENST00000419387 WASLO00401 505 aaPredicted RBP13.71□□□□□ -0.21
NUP50-205ENST00000419387 RGS12O14924 1447 aa13.71□□□□□ -0.22
NUP50-205ENST00000419387 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
NUP50-205ENST00000419387 ATRNO75882 1429 aa13.7□□□□□ -0.22
NUP50-205ENST00000419387 ADGRB2O60241 1585 aa13.7□□□□□ -0.22
NUP50-205ENST00000419387 BCL9LQ86UU0 1499 aa13.69□□□□□ -0.22
NUP50-205ENST00000419387 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
NUP50-205ENST00000419387 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
NUP50-205ENST00000419387 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
NUP50-205ENST00000419387 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
NUP50-205ENST00000419387 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
NUP50-205ENST00000419387 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
NUP50-205ENST00000419387 POTEHQ6S545 545 aa13.67□□□□□ -0.22
NUP50-205ENST00000419387 UNC5CLQ8IV45 518 aa13.67□□□□□ -0.22
NUP50-205ENST00000419387 CABLES1Q8TDN4 633 aa13.67□□□□□ -0.22
NUP50-205ENST00000419387 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
NUP50-205ENST00000419387 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
NUP50-205ENST00000419387 MARF1Q9Y4F3 1742 aaKnown RBP13.67□□□□□ -0.22
NUP50-205ENST00000419387 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
NUP50-205ENST00000419387 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
NUP50-205ENST00000419387 SLIT2O94813 1529 aa13.65□□□□□ -0.22
NUP50-205ENST00000419387 TULP4Q9NRJ4 1543 aa13.65□□□□□ -0.22
NUP50-205ENST00000419387 NBPF1Q3BBV0 1214 aa13.65□□□□□ -0.22
NUP50-205ENST00000419387 NGDNQ8NEJ9 315 aaKnown RBP13.65□□□□□ -0.22
NUP50-205ENST00000419387 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
NUP50-205ENST00000419387 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
NUP50-205ENST00000419387 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms