RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 HDGFP51858 240 aaKnown RBP19.28■□□□□ 0.68
HLA-DPA1-242ENST00000419277 CARD14Q9BXL6 1004 aa19.28■□□□□ 0.68
HLA-DPA1-242ENST00000419277 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
HLA-DPA1-242ENST00000419277 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
HLA-DPA1-242ENST00000419277 ADAMTS8Q9UP79 889 aa19.26■□□□□ 0.67
HLA-DPA1-242ENST00000419277 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
HLA-DPA1-242ENST00000419277 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
HLA-DPA1-242ENST00000419277 SHPRHQ149N8 1683 aa19.25■□□□□ 0.67
HLA-DPA1-242ENST00000419277 RRP1P56182 461 aaKnown RBP19.24■□□□□ 0.67
HLA-DPA1-242ENST00000419277 DNAJC5Q9H3Z4 198 aa19.24■□□□□ 0.67
HLA-DPA1-242ENST00000419277 ZNF521Q96K83 1311 aa19.24■□□□□ 0.67
HLA-DPA1-242ENST00000419277 NRXN3Q9Y4C0 1643 aa19.24■□□□□ 0.67
HLA-DPA1-242ENST00000419277 ZMYM3Q14202 1370 aa19.23■□□□□ 0.67
HLA-DPA1-242ENST00000419277 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
HLA-DPA1-242ENST00000419277 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
HLA-DPA1-242ENST00000419277 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
HLA-DPA1-242ENST00000419277 ATP7BP35670 1465 aa19.22■□□□□ 0.67
HLA-DPA1-242ENST00000419277 TECPR2O15040 1411 aa19.22■□□□□ 0.67
HLA-DPA1-242ENST00000419277 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
HLA-DPA1-242ENST00000419277 MORC1Q86VD1 984 aa19.22■□□□□ 0.67
HLA-DPA1-242ENST00000419277 TERF2IPQ9NYB0 399 aa19.21■□□□□ 0.67
HLA-DPA1-242ENST00000419277 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
HLA-DPA1-242ENST00000419277 CPS1P31327 1500 aa19.2■□□□□ 0.66
HLA-DPA1-242ENST00000419277 KIF20BQ96Q89 1820 aa19.2■□□□□ 0.66
HLA-DPA1-242ENST00000419277 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
HLA-DPA1-242ENST00000419277 TNRQ92752 1358 aa19.2■□□□□ 0.66
HLA-DPA1-242ENST00000419277 SLC12A5Q9H2X9 1139 aa19.2■□□□□ 0.66
HLA-DPA1-242ENST00000419277 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
HLA-DPA1-242ENST00000419277 GOLGA2Q08379 1002 aa19.18■□□□□ 0.66
HLA-DPA1-242ENST00000419277 POGKQ9P215 609 aa19.18■□□□□ 0.66
HLA-DPA1-242ENST00000419277 A0A1W2PP64 1363 aa19.17■□□□□ 0.66
HLA-DPA1-242ENST00000419277 PLEKHH1Q9ULM0 1364 aa19.16■□□□□ 0.66
HLA-DPA1-242ENST00000419277 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
HLA-DPA1-242ENST00000419277 NUTM2DQ5VT03 806 aaPredicted RBP19.15■□□□□ 0.66
HLA-DPA1-242ENST00000419277 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
HLA-DPA1-242ENST00000419277 CCDC136Q96JN2 1154 aa19.14■□□□□ 0.66
HLA-DPA1-242ENST00000419277 NKTRP30414 1462 aaKnown RBP19.14■□□□□ 0.65
HLA-DPA1-242ENST00000419277 IQSEC2Q5JU85 1478 aa19.14■□□□□ 0.65
HLA-DPA1-242ENST00000419277 ADGRB2O60241 1585 aa19.14■□□□□ 0.65
HLA-DPA1-242ENST00000419277 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
HLA-DPA1-242ENST00000419277 E9PSI1 815 aa19.13■□□□□ 0.65
HLA-DPA1-242ENST00000419277 HDGFL2Q7Z4V5 671 aaPredicted RBP19.13■□□□□ 0.65
HLA-DPA1-242ENST00000419277 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
HLA-DPA1-242ENST00000419277 TMEM2Q9UHN6 1383 aa19.12■□□□□ 0.65
HLA-DPA1-242ENST00000419277 DUSP27Q5VZP5 1158 aa19.11■□□□□ 0.65
HLA-DPA1-242ENST00000419277 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
HLA-DPA1-242ENST00000419277 CABP2Q9NPB3 220 aa19.11■□□□□ 0.65
HLA-DPA1-242ENST00000419277 FER1L4A9Z1Z3 1794 aa19.1■□□□□ 0.65
HLA-DPA1-242ENST00000419277 DIP2AQ14689 1571 aa19.1■□□□□ 0.65
HLA-DPA1-242ENST00000419277 STK26Q9P289 416 aa19.1■□□□□ 0.65
HLA-DPA1-242ENST00000419277 SLFN5Q08AF3 891 aa19.09■□□□□ 0.65
HLA-DPA1-242ENST00000419277 B4GALNT3Q6L9W6 998 aa19.09■□□□□ 0.65
HLA-DPA1-242ENST00000419277 CDCA7LQ96GN5 454 aa19.09■□□□□ 0.65
HLA-DPA1-242ENST00000419277 CDC42BPGQ6DT37 1551 aa19.09■□□□□ 0.65
HLA-DPA1-242ENST00000419277 MLECQ14165 292 aa19.08■□□□□ 0.65
HLA-DPA1-242ENST00000419277 CCDC27Q2M243 656 aa19.08■□□□□ 0.65
HLA-DPA1-242ENST00000419277 RUNDC1Q96C34 613 aa19.08■□□□□ 0.65
HLA-DPA1-242ENST00000419277 SLIT1O75093 1534 aa19.08■□□□□ 0.65
HLA-DPA1-242ENST00000419277 C3P01024 1663 aa19.08■□□□□ 0.64
HLA-DPA1-242ENST00000419277 MON2Q7Z3U7 1717 aa19.08■□□□□ 0.64
HLA-DPA1-242ENST00000419277 SALL2Q9Y467 1007 aaPredicted RBP19.08■□□□□ 0.64
HLA-DPA1-242ENST00000419277 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
HLA-DPA1-242ENST00000419277 MINK1Q8N4C8 1332 aaPredicted RBP19.07■□□□□ 0.64
HLA-DPA1-242ENST00000419277 ITSN1Q15811 1721 aa19.06■□□□□ 0.64
HLA-DPA1-242ENST00000419277 EDC4Q6P2E9 1401 aaKnown RBP19.06■□□□□ 0.64
HLA-DPA1-242ENST00000419277 APAF1O14727 1248 aa19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 AKAP12Q02952 1782 aa19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 MTHFSP49914 203 aa19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 PNNQ9H307 717 aaKnown RBP19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 ARHGAP23Q9P227 1491 aa19.05■□□□□ 0.64
HLA-DPA1-242ENST00000419277 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
HLA-DPA1-242ENST00000419277 CPSF1Q10570 1443 aaKnown RBP19.03■□□□□ 0.64
HLA-DPA1-242ENST00000419277 SAFB2Q14151 953 aaKnown RBP eCLIP19.03■□□□□ 0.64
HLA-DPA1-242ENST00000419277 WDR63Q8IWG1 891 aa19.03■□□□□ 0.64
HLA-DPA1-242ENST00000419277 PNPLA6Q8IY17 1366 aa19.02■□□□□ 0.64
HLA-DPA1-242ENST00000419277 FANCIQ9NVI1 1328 aa19.01■□□□□ 0.63
HLA-DPA1-242ENST00000419277 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
HLA-DPA1-242ENST00000419277 ADAMTS13Q76LX8 1427 aa19.01■□□□□ 0.63
HLA-DPA1-242ENST00000419277 METP08581 1390 aa19.01■□□□□ 0.63
HLA-DPA1-242ENST00000419277 WASLO00401 505 aaPredicted RBP19■□□□□ 0.63
HLA-DPA1-242ENST00000419277 CCDC146Q8IYE0 955 aa19■□□□□ 0.63
HLA-DPA1-242ENST00000419277 FYB1O15117 783 aa18.99■□□□□ 0.63
HLA-DPA1-242ENST00000419277 WWC1Q8IX03 1113 aa18.99■□□□□ 0.63
HLA-DPA1-242ENST00000419277 PTCH1Q13635 1447 aa18.99■□□□□ 0.63
HLA-DPA1-242ENST00000419277 RIMS1Q86UR5 1692 aaKnown RBP18.98■□□□□ 0.63
HLA-DPA1-242ENST00000419277 PPIP5K1Q6PFW1 1433 aa18.98■□□□□ 0.63
HLA-DPA1-242ENST00000419277 CT47B1P0C2W7 299 aaPredicted RBP18.97■□□□□ 0.63
HLA-DPA1-242ENST00000419277 AAMPQ13685 434 aa18.97■□□□□ 0.63
HLA-DPA1-242ENST00000419277 AATKQ6ZMQ8 1374 aa18.97■□□□□ 0.63
HLA-DPA1-242ENST00000419277 SENP3-EIF4A1A0A087X0R7 540 aa18.97■□□□□ 0.63
HLA-DPA1-242ENST00000419277 EID1Q9Y6B2 187 aa18.97■□□□□ 0.63
HLA-DPA1-242ENST00000419277 CDK12Q9NYV4 1490 aaPredicted RBP18.96■□□□□ 0.63
HLA-DPA1-242ENST00000419277 EXOC6Q8TAG9 804 aa18.96■□□□□ 0.63
HLA-DPA1-242ENST00000419277 MYT1Q01538 1121 aa18.95■□□□□ 0.62
HLA-DPA1-242ENST00000419277 ZNF692Q9BU19 519 aaPredicted RBP18.95■□□□□ 0.62
HLA-DPA1-242ENST00000419277 CABP1Q9NZU7 370 aa18.95■□□□□ 0.62
HLA-DPA1-242ENST00000419277 NRKQ7Z2Y5 1582 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms