RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
RFC1-203ENST00000418436 PROSER2Q86WR7 435 aaPredicted RBP15.33■□□□□ 0.04
RFC1-203ENST00000418436 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
RFC1-203ENST00000418436 TMEM94Q12767 1356 aa15.33■□□□□ 0.04
RFC1-203ENST00000418436 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
RFC1-203ENST00000418436 PRAG1Q86YV5 1406 aa15.31■□□□□ 0.04
RFC1-203ENST00000418436 NCOA3Q9Y6Q9 1424 aa15.31■□□□□ 0.04
RFC1-203ENST00000418436 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
RFC1-203ENST00000418436 LAMC1P11047 1609 aa15.3■□□□□ 0.04
RFC1-203ENST00000418436 ASXL1Q8IXJ9 1541 aa15.29■□□□□ 0.04
RFC1-203ENST00000418436 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
RFC1-203ENST00000418436 C14orf93Q9H972 538 aaKnown RBP15.29■□□□□ 0.04
RFC1-203ENST00000418436 TOM1O60784 492 aa15.28■□□□□ 0.04
RFC1-203ENST00000418436 DCAF11Q8TEB1 546 aa15.28■□□□□ 0.04
RFC1-203ENST00000418436 RBM33Q96EV2 1170 aaKnown RBP15.28■□□□□ 0.04
RFC1-203ENST00000418436 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
RFC1-203ENST00000418436 SIN3AQ96ST3 1273 aa15.27■□□□□ 0.04
RFC1-203ENST00000418436 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
RFC1-203ENST00000418436 KNDC1Q76NI1 1749 aa15.26■□□□□ 0.03
RFC1-203ENST00000418436 CFAP70Q5T0N1 1121 aa15.25■□□□□ 0.03
RFC1-203ENST00000418436 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
RFC1-203ENST00000418436 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.25■□□□□ 0.03
RFC1-203ENST00000418436 TECPR2O15040 1411 aa15.25■□□□□ 0.03
RFC1-203ENST00000418436 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
RFC1-203ENST00000418436 MSH6P52701 1360 aa15.24■□□□□ 0.03
RFC1-203ENST00000418436 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
RFC1-203ENST00000418436 ROBO2Q9HCK4 1378 aa15.24■□□□□ 0.03
RFC1-203ENST00000418436 TMEM132EQ6IEE7 984 aa15.23■□□□□ 0.03
RFC1-203ENST00000418436 C19orf44Q9H6X5 657 aa15.23■□□□□ 0.03
RFC1-203ENST00000418436 YTHDC2Q9H6S0 1430 aaKnown RBP15.23■□□□□ 0.03
RFC1-203ENST00000418436 ADGRB1O14514 1584 aa15.23■□□□□ 0.03
RFC1-203ENST00000418436 KIAA1210Q9ULL0 1709 aa15.23■□□□□ 0.03
RFC1-203ENST00000418436 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
RFC1-203ENST00000418436 NALCNQ8IZF0 1738 aa15.22■□□□□ 0.03
RFC1-203ENST00000418436 HAX1O00165 279 aa15.21■□□□□ 0.03
RFC1-203ENST00000418436 NEUROD1Q13562 356 aa15.21■□□□□ 0.03
RFC1-203ENST00000418436 FKBP8Q14318 412 aa15.21■□□□□ 0.03
RFC1-203ENST00000418436 DCCP43146 1447 aa15.2■□□□□ 0.02
RFC1-203ENST00000418436 ADGRL3Q9HAR2 1447 aa15.2■□□□□ 0.02
RFC1-203ENST00000418436 PIP4K2BP78356 416 aa15.2■□□□□ 0.02
RFC1-203ENST00000418436 SIRT1Q96EB6 747 aa15.2■□□□□ 0.02
RFC1-203ENST00000418436 C14orf37Q86TY3 774 aa15.19■□□□□ 0.02
RFC1-203ENST00000418436 STK26Q9P289 416 aa15.19■□□□□ 0.02
RFC1-203ENST00000418436 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
RFC1-203ENST00000418436 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
RFC1-203ENST00000418436 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
RFC1-203ENST00000418436 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
RFC1-203ENST00000418436 ROBO1Q9Y6N7 1651 aa15.16■□□□□ 0.02
RFC1-203ENST00000418436 ATF3P18847 181 aa15.16■□□□□ 0.02
RFC1-203ENST00000418436 PLEKHH1Q9ULM0 1364 aa15.15■□□□□ 0.02
RFC1-203ENST00000418436 WAPLQ7Z5K2 1190 aa15.15■□□□□ 0.02
RFC1-203ENST00000418436 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
RFC1-203ENST00000418436 MST1RQ04912 1400 aa15.14■□□□□ 0.01
RFC1-203ENST00000418436 CLSPNQ9HAW4 1339 aa15.14■□□□□ 0.01
RFC1-203ENST00000418436 TRPM1Q7Z4N2 1603 aa15.14■□□□□ 0.01
RFC1-203ENST00000418436 CDC42BPGQ6DT37 1551 aa15.13■□□□□ 0.01
RFC1-203ENST00000418436 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
RFC1-203ENST00000418436 HSPA1LP34931 641 aa15.12■□□□□ 0.01
RFC1-203ENST00000418436 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
RFC1-203ENST00000418436 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
RFC1-203ENST00000418436 NBPF1Q3BBV0 1214 aa15.11■□□□□ 0.01
RFC1-203ENST00000418436 TRAK1Q9UPV9 953 aa15.11■□□□□ 0.01
RFC1-203ENST00000418436 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
RFC1-203ENST00000418436 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
RFC1-203ENST00000418436 FMN2Q9NZ56 1722 aa15.09■□□□□ 0.01
RFC1-203ENST00000418436 C19orf67A6NJJ6 358 aa15.09■□□□□ 0.01
RFC1-203ENST00000418436 NBPF8Q3BBV2 869 aa15.09■□□□□ 0.01
RFC1-203ENST00000418436 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0.01
RFC1-203ENST00000418436 ADGRB2O60241 1585 aa15.08■□□□□ 0
RFC1-203ENST00000418436 AHDC1Q5TGY3 1603 aaPredicted RBP15.07■□□□□ 0
RFC1-203ENST00000418436 PHLPP1O60346 1717 aa15.07■□□□□ 0
RFC1-203ENST00000418436 BRINP3Q76B58 766 aa15.07■□□□□ 0
RFC1-203ENST00000418436 POGKQ9P215 609 aa15.07■□□□□ 0
RFC1-203ENST00000418436 NHSL1Q5SYE7 1610 aa15.06■□□□□ 0
RFC1-203ENST00000418436 EVX2Q03828 476 aa15.05■□□□□ -0
RFC1-203ENST00000418436 SAFB2Q14151 953 aaKnown RBP eCLIP15.05■□□□□ -0
RFC1-203ENST00000418436 TIMELESSQ9UNS1 1208 aa15.05■□□□□ -0
RFC1-203ENST00000418436 GPRASP1Q5JY77 1395 aa15.05■□□□□ -0
RFC1-203ENST00000418436 RGPD8O14715 1765 aaPredicted RBP15.04■□□□□ -0
RFC1-203ENST00000418436 COL16A1Q07092 1604 aaPredicted RBP15.04■□□□□ -0
RFC1-203ENST00000418436 RALGAPBQ86X10 1494 aa15.03■□□□□ -0
RFC1-203ENST00000418436 ROCK2O75116 1388 aaKnown RBP15.03■□□□□ -0
RFC1-203ENST00000418436 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
RFC1-203ENST00000418436 ORAI2Q96SN7 254 aa15.02■□□□□ -0
RFC1-203ENST00000418436 USP32Q8NFA0 1604 aa15.02□□□□□ -0.01
RFC1-203ENST00000418436 MINK1Q8N4C8 1332 aaPredicted RBP15.01□□□□□ -0.01
RFC1-203ENST00000418436 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
RFC1-203ENST00000418436 ANKARQ7Z5J8 1434 aa15□□□□□ -0.01
RFC1-203ENST00000418436 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
RFC1-203ENST00000418436 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
RFC1-203ENST00000418436 WASLO00401 505 aaPredicted RBP14.99□□□□□ -0.01
RFC1-203ENST00000418436 ESCO1Q5FWF5 840 aa14.99□□□□□ -0.01
RFC1-203ENST00000418436 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
RFC1-203ENST00000418436 KIF1AQ12756 1690 aa14.99□□□□□ -0.01
RFC1-203ENST00000418436 TULP4Q9NRJ4 1543 aa14.98□□□□□ -0.01
RFC1-203ENST00000418436 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
RFC1-203ENST00000418436 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
RFC1-203ENST00000418436 SHPRHQ149N8 1683 aa14.97□□□□□ -0.01
RFC1-203ENST00000418436 SOS2Q07890 1332 aaPredicted RBP14.96□□□□□ -0.01
RFC1-203ENST00000418436 CARD11Q9BXL7 1154 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms