RNA–Protein interactions for RNA: ENST00000417345.2

CNTFR-203, Transcript of ciliary neurotrophic factor receptor, humanhuman

TSL 3

Gene CNTFR, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-203ENST00000417345 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
CNTFR-203ENST00000417345 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
CNTFR-203ENST00000417345 UBAP1LF5GYI3 381 aa19.58■□□□□ 0.72
CNTFR-203ENST00000417345 PRAM1Q96QH2 718 aa19.58■□□□□ 0.72
CNTFR-203ENST00000417345 C19orf44Q9H6X5 657 aa19.58■□□□□ 0.72
CNTFR-203ENST00000417345 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.58■□□□□ 0.72
CNTFR-203ENST00000417345 DCCP43146 1447 aa19.58■□□□□ 0.72
CNTFR-203ENST00000417345 CADPS2Q86UW7 1296 aa19.56■□□□□ 0.72
CNTFR-203ENST00000417345 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
CNTFR-203ENST00000417345 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
CNTFR-203ENST00000417345 WAPLQ7Z5K2 1190 aa19.55■□□□□ 0.72
CNTFR-203ENST00000417345 SAFB2Q14151 953 aaKnown RBP eCLIP19.54■□□□□ 0.72
CNTFR-203ENST00000417345 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
CNTFR-203ENST00000417345 QRICH2Q9H0J4 1663 aa19.53■□□□□ 0.72
CNTFR-203ENST00000417345 PLEKHH1Q9ULM0 1364 aa19.52■□□□□ 0.72
CNTFR-203ENST00000417345 CENPJQ9HC77 1338 aaPredicted RBP19.51■□□□□ 0.71
CNTFR-203ENST00000417345 ADGRB2O60241 1585 aa19.51■□□□□ 0.71
CNTFR-203ENST00000417345 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
CNTFR-203ENST00000417345 PIP4K2BP78356 416 aa19.48■□□□□ 0.71
CNTFR-203ENST00000417345 FMN2Q9NZ56 1722 aa19.48■□□□□ 0.71
CNTFR-203ENST00000417345 SLAIN2Q9P270 581 aa19.46■□□□□ 0.71
CNTFR-203ENST00000417345 USP47Q96K76 1375 aa19.44■□□□□ 0.7
CNTFR-203ENST00000417345 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
CNTFR-203ENST00000417345 MST1RQ04912 1400 aa19.43■□□□□ 0.7
CNTFR-203ENST00000417345 ROBO1Q9Y6N7 1651 aa19.43■□□□□ 0.7
CNTFR-203ENST00000417345 SLC24A1O60721 1099 aa19.43■□□□□ 0.7
CNTFR-203ENST00000417345 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
CNTFR-203ENST00000417345 ZEB1P37275 1124 aaPredicted RBP19.41■□□□□ 0.7
CNTFR-203ENST00000417345 EVC2Q86UK5 1308 aa19.41■□□□□ 0.7
CNTFR-203ENST00000417345 ANKARQ7Z5J8 1434 aa19.41■□□□□ 0.7
CNTFR-203ENST00000417345 TULP4Q9NRJ4 1543 aa19.41■□□□□ 0.7
CNTFR-203ENST00000417345 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
CNTFR-203ENST00000417345 SBNO2Q9Y2G9 1366 aa19.4■□□□□ 0.7
CNTFR-203ENST00000417345 C1orf167Q5SNV9 1468 aa19.4■□□□□ 0.7
CNTFR-203ENST00000417345 KIF1AQ12756 1690 aa19.4■□□□□ 0.7
CNTFR-203ENST00000417345 NUTM2FA1L443 756 aa19.39■□□□□ 0.69
CNTFR-203ENST00000417345 EIF4G2P78344 907 aaKnown RBP eCLIP19.38■□□□□ 0.69
CNTFR-203ENST00000417345 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
CNTFR-203ENST00000417345 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
CNTFR-203ENST00000417345 RGPD8O14715 1765 aaPredicted RBP19.37■□□□□ 0.69
CNTFR-203ENST00000417345 ST20-MTHFSA0A0A6YYL1 179 aa19.36■□□□□ 0.69
CNTFR-203ENST00000417345 CDK19Q9BWU1 502 aa19.36■□□□□ 0.69
CNTFR-203ENST00000417345 PHLPP1O60346 1717 aa19.35■□□□□ 0.69
CNTFR-203ENST00000417345 BRINP3Q76B58 766 aa19.34■□□□□ 0.69
CNTFR-203ENST00000417345 USP32Q8NFA0 1604 aa19.33■□□□□ 0.69
CNTFR-203ENST00000417345 NHSL1Q5SYE7 1610 aa19.33■□□□□ 0.68
CNTFR-203ENST00000417345 TMF1P82094 1093 aa19.32■□□□□ 0.68
CNTFR-203ENST00000417345 ATP7BP35670 1465 aa19.32■□□□□ 0.68
CNTFR-203ENST00000417345 AHDC1Q5TGY3 1603 aaPredicted RBP19.32■□□□□ 0.68
CNTFR-203ENST00000417345 TOPAZ1Q8N9V7 1692 aa19.31■□□□□ 0.68
CNTFR-203ENST00000417345 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
CNTFR-203ENST00000417345 NUDT16Q96DE0 195 aaKnown RBP19.31■□□□□ 0.68
CNTFR-203ENST00000417345 ORAI2Q96SN7 254 aa19.31■□□□□ 0.68
CNTFR-203ENST00000417345 ATAD2Q6PL18 1390 aa19.31■□□□□ 0.68
CNTFR-203ENST00000417345 NPHP3Q7Z494 1330 aa19.3■□□□□ 0.68
CNTFR-203ENST00000417345 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
CNTFR-203ENST00000417345 PHF8Q9UPP1 1060 aa19.29■□□□□ 0.68
CNTFR-203ENST00000417345 CCDC61Q9Y6R9 512 aa19.29■□□□□ 0.68
CNTFR-203ENST00000417345 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
CNTFR-203ENST00000417345 NGDNQ8NEJ9 315 aaKnown RBP19.27■□□□□ 0.68
CNTFR-203ENST00000417345 TESK2Q96S53 571 aa19.27■□□□□ 0.68
CNTFR-203ENST00000417345 PRR36Q9H6K5 1346 aa19.26■□□□□ 0.67
CNTFR-203ENST00000417345 PPIP5K1Q6PFW1 1433 aa19.26■□□□□ 0.67
CNTFR-203ENST00000417345 HSPA1LP34931 641 aa19.26■□□□□ 0.67
CNTFR-203ENST00000417345 PMFBP1Q8TBY8 1022 aa19.25■□□□□ 0.67
CNTFR-203ENST00000417345 COL16A1Q07092 1604 aaPredicted RBP19.25■□□□□ 0.67
CNTFR-203ENST00000417345 FOXO3O43524 673 aa19.24■□□□□ 0.67
CNTFR-203ENST00000417345 PSME1Q06323 249 aa19.24■□□□□ 0.67
CNTFR-203ENST00000417345 PUS7Q96PZ0 661 aaKnown RBP19.24■□□□□ 0.67
CNTFR-203ENST00000417345 NINLQ9Y2I6 1382 aa19.23■□□□□ 0.67
CNTFR-203ENST00000417345 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
CNTFR-203ENST00000417345 LRRC59Q96AG4 307 aaKnown RBP19.2■□□□□ 0.66
CNTFR-203ENST00000417345 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
CNTFR-203ENST00000417345 PLEKHG3A1L390 1219 aa19.19■□□□□ 0.66
CNTFR-203ENST00000417345 KRT28Q7Z3Y7 464 aa19.19■□□□□ 0.66
CNTFR-203ENST00000417345 DDX17Q92841 729 aaKnown RBP19.19■□□□□ 0.66
CNTFR-203ENST00000417345 POLR3GLQ9BT43 218 aa19.19■□□□□ 0.66
CNTFR-203ENST00000417345 CABP1Q9NZU7 370 aa19.19■□□□□ 0.66
CNTFR-203ENST00000417345 PXDNQ92626 1479 aa19.19■□□□□ 0.66
CNTFR-203ENST00000417345 ACEP12821 1306 aa19.19■□□□□ 0.66
CNTFR-203ENST00000417345 SOS2Q07890 1332 aaPredicted RBP19.19■□□□□ 0.66
CNTFR-203ENST00000417345 POLR3AO14802 1390 aaPredicted RBP19.19■□□□□ 0.66
CNTFR-203ENST00000417345 JCADQ9P266 1359 aa19.19■□□□□ 0.66
CNTFR-203ENST00000417345 SHPRHQ149N8 1683 aa19.18■□□□□ 0.66
CNTFR-203ENST00000417345 XPCQ01831 940 aaPredicted RBP19.18■□□□□ 0.66
CNTFR-203ENST00000417345 AKAP12Q02952 1782 aa19.18■□□□□ 0.66
CNTFR-203ENST00000417345 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
CNTFR-203ENST00000417345 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
CNTFR-203ENST00000417345 PAK3O75914 559 aaPredicted RBP19.15■□□□□ 0.66
CNTFR-203ENST00000417345 ZNF692Q9BU19 519 aaPredicted RBP19.15■□□□□ 0.66
CNTFR-203ENST00000417345 SBNO1A3KN83 1393 aa19.15■□□□□ 0.66
CNTFR-203ENST00000417345 BRD4O60885 1362 aaPredicted RBP19.15■□□□□ 0.66
CNTFR-203ENST00000417345 TNS3Q68CZ2 1445 aa19.15■□□□□ 0.66
CNTFR-203ENST00000417345 TRPM3Q9HCF6 1732 aaPredicted RBP19.14■□□□□ 0.66
CNTFR-203ENST00000417345 LMOD2Q6P5Q4 547 aa19.14■□□□□ 0.65
CNTFR-203ENST00000417345 ARHGEF10O15013 1369 aa19.14■□□□□ 0.65
CNTFR-203ENST00000417345 MON2Q7Z3U7 1717 aa19.14■□□□□ 0.65
CNTFR-203ENST00000417345 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
CNTFR-203ENST00000417345 MYOM1P52179 1685 aa19.12■□□□□ 0.65
CNTFR-203ENST00000417345 USP6P35125 1406 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms