RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 QRICH2Q9H0J4 1663 aa13.04□□□□□ -0.32
LINC00494-201ENST00000416742 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
LINC00494-201ENST00000416742 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
LINC00494-201ENST00000416742 TSPOAP1O95153 1857 aa13.03□□□□□ -0.32
LINC00494-201ENST00000416742 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
LINC00494-201ENST00000416742 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
LINC00494-201ENST00000416742 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.32
LINC00494-201ENST00000416742 CFAP53Q96M91 514 aa13.02□□□□□ -0.32
LINC00494-201ENST00000416742 GLI2P10070 1586 aa13.02□□□□□ -0.32
LINC00494-201ENST00000416742 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
LINC00494-201ENST00000416742 E9PSI1 815 aa13.01□□□□□ -0.33
LINC00494-201ENST00000416742 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
LINC00494-201ENST00000416742 PIK3C2BO00750 1634 aa13□□□□□ -0.33
LINC00494-201ENST00000416742 GGNBP2Q9H3C7 697 aa13□□□□□ -0.33
LINC00494-201ENST00000416742 BCAR3O75815 825 aa13□□□□□ -0.33
LINC00494-201ENST00000416742 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
LINC00494-201ENST00000416742 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
LINC00494-201ENST00000416742 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
LINC00494-201ENST00000416742 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
LINC00494-201ENST00000416742 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
LINC00494-201ENST00000416742 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
LINC00494-201ENST00000416742 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
LINC00494-201ENST00000416742 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
LINC00494-201ENST00000416742 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00494-201ENST00000416742 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
LINC00494-201ENST00000416742 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
LINC00494-201ENST00000416742 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
LINC00494-201ENST00000416742 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
LINC00494-201ENST00000416742 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
LINC00494-201ENST00000416742 TULP4Q9NRJ4 1543 aa12.98□□□□□ -0.33
LINC00494-201ENST00000416742 ANP32AP39687 249 aaKnown RBP12.98□□□□□ -0.33
LINC00494-201ENST00000416742 MYO5BQ9ULV0 1848 aa12.97□□□□□ -0.33
LINC00494-201ENST00000416742 ZC3H13Q5T200 1668 aaKnown RBP12.97□□□□□ -0.33
LINC00494-201ENST00000416742 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
LINC00494-201ENST00000416742 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
LINC00494-201ENST00000416742 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
LINC00494-201ENST00000416742 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
LINC00494-201ENST00000416742 PREX1Q8TCU6 1659 aa12.97□□□□□ -0.33
LINC00494-201ENST00000416742 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
LINC00494-201ENST00000416742 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
LINC00494-201ENST00000416742 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
LINC00494-201ENST00000416742 NKTRP30414 1462 aaKnown RBP12.96□□□□□ -0.34
LINC00494-201ENST00000416742 A0A1W2PP64 1363 aa12.96□□□□□ -0.34
LINC00494-201ENST00000416742 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.34
LINC00494-201ENST00000416742 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.34
LINC00494-201ENST00000416742 PDE4AP27815 886 aa12.95□□□□□ -0.34
LINC00494-201ENST00000416742 DIP2BQ9P265 1576 aa12.95□□□□□ -0.34
LINC00494-201ENST00000416742 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
LINC00494-201ENST00000416742 TMEM131LA2VDJ0 1609 aa12.94□□□□□ -0.34
LINC00494-201ENST00000416742 HDGFL2Q7Z4V5 671 aaPredicted RBP12.94□□□□□ -0.34
LINC00494-201ENST00000416742 FRAT1Q92837 279 aaPredicted RBP12.94□□□□□ -0.34
LINC00494-201ENST00000416742 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
LINC00494-201ENST00000416742 FYB1O15117 783 aa12.93□□□□□ -0.34
LINC00494-201ENST00000416742 ATAD2Q6PL18 1390 aa12.93□□□□□ -0.34
LINC00494-201ENST00000416742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00494-201ENST00000416742 NOP58Q9Y2X3 529 aaKnown RBP12.92□□□□□ -0.34
LINC00494-201ENST00000416742 NSD2O96028 1365 aa12.92□□□□□ -0.34
LINC00494-201ENST00000416742 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
LINC00494-201ENST00000416742 PTPRMP28827 1452 aa12.91□□□□□ -0.34
LINC00494-201ENST00000416742 MS4A1P11836 297 aa12.91□□□□□ -0.34
LINC00494-201ENST00000416742 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
LINC00494-201ENST00000416742 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
LINC00494-201ENST00000416742 BCL2L13Q9BXK5 485 aa12.91□□□□□ -0.34
LINC00494-201ENST00000416742 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
LINC00494-201ENST00000416742 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
LINC00494-201ENST00000416742 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
LINC00494-201ENST00000416742 ABCC11Q96J66 1382 aa12.9□□□□□ -0.34
LINC00494-201ENST00000416742 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
LINC00494-201ENST00000416742 IPO9Q96P70 1041 aaKnown RBP12.9□□□□□ -0.34
LINC00494-201ENST00000416742 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
LINC00494-201ENST00000416742 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
LINC00494-201ENST00000416742 FBLN1P23142 703 aa12.89□□□□□ -0.35
LINC00494-201ENST00000416742 RGS3P49796 1198 aa12.89□□□□□ -0.35
LINC00494-201ENST00000416742 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
LINC00494-201ENST00000416742 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
LINC00494-201ENST00000416742 NINLQ9Y2I6 1382 aa12.89□□□□□ -0.35
LINC00494-201ENST00000416742 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
LINC00494-201ENST00000416742 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
LINC00494-201ENST00000416742 KDM2BQ8NHM5 1336 aa12.88□□□□□ -0.35
LINC00494-201ENST00000416742 A2ML1A8K2U0 1454 aa12.88□□□□□ -0.35
LINC00494-201ENST00000416742 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
LINC00494-201ENST00000416742 SHPRHQ149N8 1683 aa12.88□□□□□ -0.35
LINC00494-201ENST00000416742 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
LINC00494-201ENST00000416742 RARSP54136 660 aaKnown RBP12.87□□□□□ -0.35
LINC00494-201ENST00000416742 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
LINC00494-201ENST00000416742 CLUAP1Q96AJ1 413 aa12.86□□□□□ -0.35
LINC00494-201ENST00000416742 MYH16Q9H6N6 1097 aa12.86□□□□□ -0.35
LINC00494-201ENST00000416742 USP32Q8NFA0 1604 aa12.86□□□□□ -0.35
LINC00494-201ENST00000416742 AGLP35573 1532 aa12.86□□□□□ -0.35
LINC00494-201ENST00000416742 PDE3AQ14432 1141 aa12.86□□□□□ -0.35
LINC00494-201ENST00000416742 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00494-201ENST00000416742 TSR2Q969E8 191 aaKnown RBP12.85□□□□□ -0.35
LINC00494-201ENST00000416742 PHF23Q9BUL5 403 aaPredicted RBP12.85□□□□□ -0.35
LINC00494-201ENST00000416742 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
LINC00494-201ENST00000416742 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
LINC00494-201ENST00000416742 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
LINC00494-201ENST00000416742 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
LINC00494-201ENST00000416742 HDGFP51858 240 aaKnown RBP12.84□□□□□ -0.35
LINC00494-201ENST00000416742 NBR1Q14596 966 aa12.84□□□□□ -0.35
LINC00494-201ENST00000416742 NCKAP5LQ9HCH0 1330 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms