RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 PPM1GO15355 546 aaPredicted RBP19.08■□□□□ 0.65
LINC00475-202ENST00000416438 CANXP27824 592 aaKnown RBP19.08■□□□□ 0.65
LINC00475-202ENST00000416438 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.64
LINC00475-202ENST00000416438 TCP11L2Q8N4U5 519 aa19.07■□□□□ 0.64
LINC00475-202ENST00000416438 RAPGEF3O95398 923 aa19.06■□□□□ 0.64
LINC00475-202ENST00000416438 MTHFSP49914 203 aa19.06■□□□□ 0.64
LINC00475-202ENST00000416438 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
LINC00475-202ENST00000416438 ADGRB3O60242 1522 aa19.06■□□□□ 0.64
LINC00475-202ENST00000416438 TNNQ9UQP3 1299 aa19.05■□□□□ 0.64
LINC00475-202ENST00000416438 MLH3Q9UHC1 1453 aa19.05■□□□□ 0.64
LINC00475-202ENST00000416438 BCL2L13Q9BXK5 485 aa19.05■□□□□ 0.64
LINC00475-202ENST00000416438 RUNDC1Q96C34 613 aa19.04■□□□□ 0.64
LINC00475-202ENST00000416438 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
LINC00475-202ENST00000416438 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
LINC00475-202ENST00000416438 HECW2Q9P2P5 1572 aa19.04■□□□□ 0.64
LINC00475-202ENST00000416438 SAFB2Q14151 953 aaKnown RBP eCLIP19.04■□□□□ 0.64
LINC00475-202ENST00000416438 PDE3AQ14432 1141 aa19.03■□□□□ 0.64
LINC00475-202ENST00000416438 NGEFQ8N5V2 710 aa19.03■□□□□ 0.64
LINC00475-202ENST00000416438 CLUAP1Q96AJ1 413 aa19.03■□□□□ 0.64
LINC00475-202ENST00000416438 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.64
LINC00475-202ENST00000416438 CGNL1Q0VF96 1302 aa19.02■□□□□ 0.64
LINC00475-202ENST00000416438 RARSP54136 660 aaKnown RBP19.01■□□□□ 0.63
LINC00475-202ENST00000416438 NFKBIBQ15653 356 aa19.01■□□□□ 0.63
LINC00475-202ENST00000416438 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
LINC00475-202ENST00000416438 RLBP1P12271 317 aa19■□□□□ 0.63
LINC00475-202ENST00000416438 CABP2Q9NPB3 220 aa19■□□□□ 0.63
LINC00475-202ENST00000416438 ABCC3O15438 1527 aa18.99■□□□□ 0.63
LINC00475-202ENST00000416438 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
LINC00475-202ENST00000416438 SEC24BO95487 1268 aa18.98■□□□□ 0.63
LINC00475-202ENST00000416438 PPLO60437 1756 aa18.98■□□□□ 0.63
LINC00475-202ENST00000416438 SETBP1Q9Y6X0 1596 aa18.98■□□□□ 0.63
LINC00475-202ENST00000416438 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
LINC00475-202ENST00000416438 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC00475-202ENST00000416438 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
LINC00475-202ENST00000416438 PCDHB15Q9Y5E8 787 aa18.96■□□□□ 0.63
LINC00475-202ENST00000416438 SHPRHQ149N8 1683 aa18.96■□□□□ 0.63
LINC00475-202ENST00000416438 CFAP53Q96M91 514 aa18.96■□□□□ 0.63
LINC00475-202ENST00000416438 STK26Q9P289 416 aa18.96■□□□□ 0.63
LINC00475-202ENST00000416438 QRICH2Q9H0J4 1663 aa18.95■□□□□ 0.62
LINC00475-202ENST00000416438 WDR63Q8IWG1 891 aa18.95■□□□□ 0.62
LINC00475-202ENST00000416438 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
LINC00475-202ENST00000416438 EVC2Q86UK5 1308 aa18.95■□□□□ 0.62
LINC00475-202ENST00000416438 SIGLEC1Q9BZZ2 1709 aa18.94■□□□□ 0.62
LINC00475-202ENST00000416438 IL27Q8NEV9 243 aa18.94■□□□□ 0.62
LINC00475-202ENST00000416438 USP19O94966 1318 aa18.94■□□□□ 0.62
LINC00475-202ENST00000416438 CAMSAP1Q5T5Y3 1602 aa18.93■□□□□ 0.62
LINC00475-202ENST00000416438 IQSEC2Q5JU85 1478 aa18.93■□□□□ 0.62
LINC00475-202ENST00000416438 NEO1Q92859 1461 aa18.92■□□□□ 0.62
LINC00475-202ENST00000416438 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
LINC00475-202ENST00000416438 DIP2CQ9Y2E4 1556 aa18.91■□□□□ 0.62
LINC00475-202ENST00000416438 IDI1Q13907 227 aa18.91■□□□□ 0.62
LINC00475-202ENST00000416438 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
LINC00475-202ENST00000416438 NINLQ9Y2I6 1382 aa18.91■□□□□ 0.62
LINC00475-202ENST00000416438 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
LINC00475-202ENST00000416438 ZC3H13Q5T200 1668 aaKnown RBP18.9■□□□□ 0.62
LINC00475-202ENST00000416438 ANKRD36BQ8N2N9 1353 aa18.9■□□□□ 0.62
LINC00475-202ENST00000416438 U2SURPO15042 1029 aaKnown RBP18.9■□□□□ 0.62
LINC00475-202ENST00000416438 FRAT2O75474 233 aaPredicted RBP18.9■□□□□ 0.62
LINC00475-202ENST00000416438 SRPK2P78362 688 aaKnown RBP18.89■□□□□ 0.61
LINC00475-202ENST00000416438 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
LINC00475-202ENST00000416438 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
LINC00475-202ENST00000416438 MAPK8IP3Q9UPT6 1336 aa18.89■□□□□ 0.61
LINC00475-202ENST00000416438 YEATS2Q9ULM3 1422 aa18.89■□□□□ 0.61
LINC00475-202ENST00000416438 GSE1Q14687 1217 aa18.88■□□□□ 0.61
LINC00475-202ENST00000416438 PDZRN3Q9UPQ7 1066 aa18.88■□□□□ 0.61
LINC00475-202ENST00000416438 PMFBP1Q8TBY8 1022 aa18.88■□□□□ 0.61
LINC00475-202ENST00000416438 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
LINC00475-202ENST00000416438 MYH16Q9H6N6 1097 aa18.87■□□□□ 0.61
LINC00475-202ENST00000416438 GLI2P10070 1586 aa18.87■□□□□ 0.61
LINC00475-202ENST00000416438 NEXMIFQ5QGS0 1516 aa18.86■□□□□ 0.61
LINC00475-202ENST00000416438 PIK3C2BO00750 1634 aa18.86■□□□□ 0.61
LINC00475-202ENST00000416438 MINK1Q8N4C8 1332 aaPredicted RBP18.85■□□□□ 0.61
LINC00475-202ENST00000416438 A0A1W2PP64 1363 aa18.85■□□□□ 0.61
LINC00475-202ENST00000416438 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
LINC00475-202ENST00000416438 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
LINC00475-202ENST00000416438 PUS7Q96PZ0 661 aaKnown RBP18.84■□□□□ 0.61
LINC00475-202ENST00000416438 MVPQ14764 893 aaKnown RBP18.82■□□□□ 0.6
LINC00475-202ENST00000416438 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
LINC00475-202ENST00000416438 PLEKHF1Q96S99 279 aa18.82■□□□□ 0.6
LINC00475-202ENST00000416438 TMPOP42166 694 aaKnown RBP18.82■□□□□ 0.6
LINC00475-202ENST00000416438 ZKSCAN2Q63HK3 967 aa18.82■□□□□ 0.6
LINC00475-202ENST00000416438 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
LINC00475-202ENST00000416438 RWDD1Q9H446 243 aaPredicted RBP18.82■□□□□ 0.6
LINC00475-202ENST00000416438 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
LINC00475-202ENST00000416438 PRAM1Q96QH2 718 aa18.81■□□□□ 0.6
LINC00475-202ENST00000416438 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
LINC00475-202ENST00000416438 FYB1O15117 783 aa18.81■□□□□ 0.6
LINC00475-202ENST00000416438 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
LINC00475-202ENST00000416438 SMC4Q9NTJ3 1288 aa18.81■□□□□ 0.6
LINC00475-202ENST00000416438 NSD2O96028 1365 aa18.81■□□□□ 0.6
LINC00475-202ENST00000416438 ARHGAP31Q2M1Z3 1444 aa18.8■□□□□ 0.6
LINC00475-202ENST00000416438 USP32Q8NFA0 1604 aa18.8■□□□□ 0.6
LINC00475-202ENST00000416438 SLKQ9H2G2 1235 aaPredicted RBP18.8■□□□□ 0.6
LINC00475-202ENST00000416438 BRPF3Q9ULD4 1205 aa18.79■□□□□ 0.6
LINC00475-202ENST00000416438 ABCC11Q96J66 1382 aa18.79■□□□□ 0.6
LINC00475-202ENST00000416438 FBLN1P23142 703 aa18.79■□□□□ 0.6
LINC00475-202ENST00000416438 SSH1Q8WYL5 1049 aa18.79■□□□□ 0.6
LINC00475-202ENST00000416438 POGKQ9P215 609 aa18.79■□□□□ 0.6
LINC00475-202ENST00000416438 AAMPQ13685 434 aa18.78■□□□□ 0.6
LINC00475-202ENST00000416438 FBXO31Q5XUX0 539 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms