RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 CDC42BPGQ6DT37 1551 aa18.25■□□□□ 0.51
YIPF3-203ENST00000416380 UBAP1LF5GYI3 381 aa18.24■□□□□ 0.51
YIPF3-203ENST00000416380 ADGRB2O60241 1585 aa18.24■□□□□ 0.51
YIPF3-203ENST00000416380 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
YIPF3-203ENST00000416380 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
YIPF3-203ENST00000416380 SLAIN2Q9P270 581 aa18.21■□□□□ 0.51
YIPF3-203ENST00000416380 TOM1O60784 492 aa18.2■□□□□ 0.5
YIPF3-203ENST00000416380 CADPS2Q86UW7 1296 aa18.2■□□□□ 0.5
YIPF3-203ENST00000416380 C1orf167Q5SNV9 1468 aa18.2■□□□□ 0.5
YIPF3-203ENST00000416380 USP32Q8NFA0 1604 aa18.17■□□□□ 0.5
YIPF3-203ENST00000416380 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
YIPF3-203ENST00000416380 FMN2Q9NZ56 1722 aa18.16■□□□□ 0.5
YIPF3-203ENST00000416380 ATF3P18847 181 aa18.15■□□□□ 0.5
YIPF3-203ENST00000416380 BRINP3Q76B58 766 aa18.15■□□□□ 0.5
YIPF3-203ENST00000416380 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
YIPF3-203ENST00000416380 CARD11Q9BXL7 1154 aa18.15■□□□□ 0.5
YIPF3-203ENST00000416380 POGKQ9P215 609 aa18.15■□□□□ 0.5
YIPF3-203ENST00000416380 PRR36Q9H6K5 1346 aa18.15■□□□□ 0.5
YIPF3-203ENST00000416380 CENPJQ9HC77 1338 aaPredicted RBP18.15■□□□□ 0.5
YIPF3-203ENST00000416380 ROBO1Q9Y6N7 1651 aa18.15■□□□□ 0.5
YIPF3-203ENST00000416380 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.49
YIPF3-203ENST00000416380 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
YIPF3-203ENST00000416380 MINK1Q8N4C8 1332 aaPredicted RBP18.14■□□□□ 0.49
YIPF3-203ENST00000416380 SBNO2Q9Y2G9 1366 aa18.14■□□□□ 0.49
YIPF3-203ENST00000416380 WASLO00401 505 aaPredicted RBP18.13■□□□□ 0.49
YIPF3-203ENST00000416380 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
YIPF3-203ENST00000416380 TESK2Q96S53 571 aa18.13■□□□□ 0.49
YIPF3-203ENST00000416380 ORAI2Q96SN7 254 aa18.12■□□□□ 0.49
YIPF3-203ENST00000416380 ATP7BP35670 1465 aa18.11■□□□□ 0.49
YIPF3-203ENST00000416380 QRICH2Q9H0J4 1663 aa18.11■□□□□ 0.49
YIPF3-203ENST00000416380 ANKARQ7Z5J8 1434 aa18.1■□□□□ 0.49
YIPF3-203ENST00000416380 HSPA1LP34931 641 aa18.1■□□□□ 0.49
YIPF3-203ENST00000416380 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
YIPF3-203ENST00000416380 USP47Q96K76 1375 aa18.08■□□□□ 0.49
YIPF3-203ENST00000416380 CDK19Q9BWU1 502 aa18.08■□□□□ 0.48
YIPF3-203ENST00000416380 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
YIPF3-203ENST00000416380 NHSL1Q5SYE7 1610 aa18.07■□□□□ 0.48
YIPF3-203ENST00000416380 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
YIPF3-203ENST00000416380 COL16A1Q07092 1604 aaPredicted RBP18.06■□□□□ 0.48
YIPF3-203ENST00000416380 NUTM2FA1L443 756 aa18.06■□□□□ 0.48
YIPF3-203ENST00000416380 DDX17Q92841 729 aaKnown RBP18.05■□□□□ 0.48
YIPF3-203ENST00000416380 PXDNQ92626 1479 aa18.05■□□□□ 0.48
YIPF3-203ENST00000416380 TOPAZ1Q8N9V7 1692 aa18.05■□□□□ 0.48
YIPF3-203ENST00000416380 SOS2Q07890 1332 aaPredicted RBP18.03■□□□□ 0.48
YIPF3-203ENST00000416380 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
YIPF3-203ENST00000416380 RGPD8O14715 1765 aaPredicted RBP18.03■□□□□ 0.48
YIPF3-203ENST00000416380 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
YIPF3-203ENST00000416380 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
YIPF3-203ENST00000416380 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
YIPF3-203ENST00000416380 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
YIPF3-203ENST00000416380 DISP3Q9P2K9 1392 aa18■□□□□ 0.47
YIPF3-203ENST00000416380 PHF8Q9UPP1 1060 aa17.99■□□□□ 0.47
YIPF3-203ENST00000416380 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
YIPF3-203ENST00000416380 KIF1AQ12756 1690 aa17.99■□□□□ 0.47
YIPF3-203ENST00000416380 PUS7Q96PZ0 661 aaKnown RBP17.98■□□□□ 0.47
YIPF3-203ENST00000416380 EVC2Q86UK5 1308 aa17.98■□□□□ 0.47
YIPF3-203ENST00000416380 CD163L1Q9NR16 1453 aa17.97■□□□□ 0.47
YIPF3-203ENST00000416380 FOXO3O43524 673 aa17.97■□□□□ 0.47
YIPF3-203ENST00000416380 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
YIPF3-203ENST00000416380 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
YIPF3-203ENST00000416380 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
YIPF3-203ENST00000416380 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
YIPF3-203ENST00000416380 SSH2Q76I76 1423 aa17.95■□□□□ 0.46
YIPF3-203ENST00000416380 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
YIPF3-203ENST00000416380 PPIP5K1Q6PFW1 1433 aa17.94■□□□□ 0.46
YIPF3-203ENST00000416380 TRPM3Q9HCF6 1732 aaPredicted RBP17.94■□□□□ 0.46
YIPF3-203ENST00000416380 NPHP3Q7Z494 1330 aa17.94■□□□□ 0.46
YIPF3-203ENST00000416380 CPSF1Q10570 1443 aaKnown RBP17.93■□□□□ 0.46
YIPF3-203ENST00000416380 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
YIPF3-203ENST00000416380 CABP1Q9NZU7 370 aa17.93■□□□□ 0.46
YIPF3-203ENST00000416380 ACEP12821 1306 aa17.93■□□□□ 0.46
YIPF3-203ENST00000416380 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
YIPF3-203ENST00000416380 XPCQ01831 940 aaPredicted RBP17.92■□□□□ 0.46
YIPF3-203ENST00000416380 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
YIPF3-203ENST00000416380 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
YIPF3-203ENST00000416380 KRT28Q7Z3Y7 464 aa17.91■□□□□ 0.46
YIPF3-203ENST00000416380 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
YIPF3-203ENST00000416380 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
YIPF3-203ENST00000416380 SPATA31A3Q5VYP0 1347 aa17.9■□□□□ 0.46
YIPF3-203ENST00000416380 JCADQ9P266 1359 aa17.9■□□□□ 0.46
YIPF3-203ENST00000416380 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
YIPF3-203ENST00000416380 COL22A1Q8NFW1 1626 aaPredicted RBP17.89■□□□□ 0.45
YIPF3-203ENST00000416380 LRP6O75581 1613 aa17.88■□□□□ 0.45
YIPF3-203ENST00000416380 ALS2Q96Q42 1657 aa17.88■□□□□ 0.45
YIPF3-203ENST00000416380 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
YIPF3-203ENST00000416380 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
YIPF3-203ENST00000416380 SLC24A1O60721 1099 aa17.87■□□□□ 0.45
YIPF3-203ENST00000416380 TMF1P82094 1093 aa17.87■□□□□ 0.45
YIPF3-203ENST00000416380 TNS3Q68CZ2 1445 aa17.87■□□□□ 0.45
YIPF3-203ENST00000416380 USP6P35125 1406 aa17.86■□□□□ 0.45
YIPF3-203ENST00000416380 NRKQ7Z2Y5 1582 aa17.86■□□□□ 0.45
YIPF3-203ENST00000416380 MYOM1P52179 1685 aa17.86■□□□□ 0.45
YIPF3-203ENST00000416380 PSME1Q06323 249 aa17.84■□□□□ 0.45
YIPF3-203ENST00000416380 NGDNQ8NEJ9 315 aaKnown RBP17.84■□□□□ 0.45
YIPF3-203ENST00000416380 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
YIPF3-203ENST00000416380 A0A1W2PP64 1363 aa17.82■□□□□ 0.44
YIPF3-203ENST00000416380 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
YIPF3-203ENST00000416380 NINLQ9Y2I6 1382 aa17.82■□□□□ 0.44
YIPF3-203ENST00000416380 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
YIPF3-203ENST00000416380 MON2Q7Z3U7 1717 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms