RNA–Protein interactions for RNA: ENST00000416255.5

PDCL3-202, Transcript of phosducin like 3, humanhuman

TSL 2

Gene PDCL3, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-202ENST00000416255 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
PDCL3-202ENST00000416255 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
PDCL3-202ENST00000416255 SLAIN2Q9P270 581 aa19.04■□□□□ 0.64
PDCL3-202ENST00000416255 ATF3P18847 181 aa19.03■□□□□ 0.64
PDCL3-202ENST00000416255 WAPLQ7Z5K2 1190 aa19.03■□□□□ 0.64
PDCL3-202ENST00000416255 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
PDCL3-202ENST00000416255 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
PDCL3-202ENST00000416255 NBPF1Q3BBV0 1214 aa19■□□□□ 0.63
PDCL3-202ENST00000416255 PRAM1Q96QH2 718 aa19■□□□□ 0.63
PDCL3-202ENST00000416255 C1orf167Q5SNV9 1468 aa19■□□□□ 0.63
PDCL3-202ENST00000416255 RALGAPBQ86X10 1494 aa19■□□□□ 0.63
PDCL3-202ENST00000416255 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
PDCL3-202ENST00000416255 HSPA1LP34931 641 aa18.99■□□□□ 0.63
PDCL3-202ENST00000416255 NBPF8Q3BBV2 869 aa18.99■□□□□ 0.63
PDCL3-202ENST00000416255 TRAK1Q9UPV9 953 aa18.99■□□□□ 0.63
PDCL3-202ENST00000416255 NHSL1Q5SYE7 1610 aa18.99■□□□□ 0.63
PDCL3-202ENST00000416255 COL16A1Q07092 1604 aaPredicted RBP18.97■□□□□ 0.63
PDCL3-202ENST00000416255 ILDR2Q71H61 639 aa18.96■□□□□ 0.63
PDCL3-202ENST00000416255 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
PDCL3-202ENST00000416255 PHLPP1O60346 1717 aa18.96■□□□□ 0.63
PDCL3-202ENST00000416255 ROCK2O75116 1388 aaKnown RBP18.94■□□□□ 0.62
PDCL3-202ENST00000416255 USP32Q8NFA0 1604 aa18.94■□□□□ 0.62
PDCL3-202ENST00000416255 POGKQ9P215 609 aa18.94■□□□□ 0.62
PDCL3-202ENST00000416255 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
PDCL3-202ENST00000416255 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
PDCL3-202ENST00000416255 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
PDCL3-202ENST00000416255 SAFB2Q14151 953 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDCL3-202ENST00000416255 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
PDCL3-202ENST00000416255 TULP4Q9NRJ4 1543 aa18.91■□□□□ 0.62
PDCL3-202ENST00000416255 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
PDCL3-202ENST00000416255 MINK1Q8N4C8 1332 aaPredicted RBP18.89■□□□□ 0.61
PDCL3-202ENST00000416255 ORAI2Q96SN7 254 aa18.88■□□□□ 0.61
PDCL3-202ENST00000416255 CENPJQ9HC77 1338 aaPredicted RBP18.88■□□□□ 0.61
PDCL3-202ENST00000416255 RGPD8O14715 1765 aaPredicted RBP18.87■□□□□ 0.61
PDCL3-202ENST00000416255 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
PDCL3-202ENST00000416255 SHPRHQ149N8 1683 aa18.86■□□□□ 0.61
PDCL3-202ENST00000416255 TOPAZ1Q8N9V7 1692 aa18.86■□□□□ 0.61
PDCL3-202ENST00000416255 ATP7BP35670 1465 aa18.86■□□□□ 0.61
PDCL3-202ENST00000416255 HIRIP3Q9BW71 556 aaPredicted RBP18.86■□□□□ 0.61
PDCL3-202ENST00000416255 WASLO00401 505 aaPredicted RBP18.85■□□□□ 0.61
PDCL3-202ENST00000416255 ITSN1Q15811 1721 aa18.84■□□□□ 0.61
PDCL3-202ENST00000416255 PXDNQ92626 1479 aa18.84■□□□□ 0.61
PDCL3-202ENST00000416255 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.61
PDCL3-202ENST00000416255 NUTM2FA1L443 756 aa18.83■□□□□ 0.6
PDCL3-202ENST00000416255 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.6
PDCL3-202ENST00000416255 SBNO2Q9Y2G9 1366 aa18.82■□□□□ 0.6
PDCL3-202ENST00000416255 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
PDCL3-202ENST00000416255 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
PDCL3-202ENST00000416255 JCADQ9P266 1359 aa18.81■□□□□ 0.6
PDCL3-202ENST00000416255 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
PDCL3-202ENST00000416255 DDX17Q92841 729 aaKnown RBP18.81■□□□□ 0.6
PDCL3-202ENST00000416255 NPHP3Q7Z494 1330 aa18.79■□□□□ 0.6
PDCL3-202ENST00000416255 COL22A1Q8NFW1 1626 aaPredicted RBP18.78■□□□□ 0.6
PDCL3-202ENST00000416255 CDK19Q9BWU1 502 aa18.77■□□□□ 0.6
PDCL3-202ENST00000416255 PHF8Q9UPP1 1060 aa18.77■□□□□ 0.6
PDCL3-202ENST00000416255 PNPLA6Q8IY17 1366 aa18.76■□□□□ 0.59
PDCL3-202ENST00000416255 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
PDCL3-202ENST00000416255 LRP6O75581 1613 aa18.74■□□□□ 0.59
PDCL3-202ENST00000416255 FOXO3O43524 673 aa18.74■□□□□ 0.59
PDCL3-202ENST00000416255 LRRC59Q96AG4 307 aaKnown RBP18.74■□□□□ 0.59
PDCL3-202ENST00000416255 NUDT16Q96DE0 195 aaKnown RBP18.74■□□□□ 0.59
PDCL3-202ENST00000416255 USP47Q96K76 1375 aa18.73■□□□□ 0.59
PDCL3-202ENST00000416255 SPATA31A6Q5VVP1 1343 aa18.73■□□□□ 0.59
PDCL3-202ENST00000416255 EVC2Q86UK5 1308 aa18.72■□□□□ 0.59
PDCL3-202ENST00000416255 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
PDCL3-202ENST00000416255 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
PDCL3-202ENST00000416255 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
PDCL3-202ENST00000416255 SRPK2P78362 688 aaKnown RBP18.7■□□□□ 0.58
PDCL3-202ENST00000416255 XPCQ01831 940 aaPredicted RBP18.7■□□□□ 0.58
PDCL3-202ENST00000416255 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
PDCL3-202ENST00000416255 PMFBP1Q8TBY8 1022 aa18.7■□□□□ 0.58
PDCL3-202ENST00000416255 TESK2Q96S53 571 aa18.7■□□□□ 0.58
PDCL3-202ENST00000416255 CABP2Q9NPB3 220 aa18.7■□□□□ 0.58
PDCL3-202ENST00000416255 CCDC61Q9Y6R9 512 aa18.7■□□□□ 0.58
PDCL3-202ENST00000416255 ALS2Q96Q42 1657 aa18.69■□□□□ 0.58
PDCL3-202ENST00000416255 ST20-MTHFSA0A0A6YYL1 179 aa18.68■□□□□ 0.58
PDCL3-202ENST00000416255 PLEKHG3A1L390 1219 aa18.68■□□□□ 0.58
PDCL3-202ENST00000416255 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
PDCL3-202ENST00000416255 SPATA31A3Q5VYP0 1347 aa18.68■□□□□ 0.58
PDCL3-202ENST00000416255 ABCA3Q99758 1704 aa18.67■□□□□ 0.58
PDCL3-202ENST00000416255 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
PDCL3-202ENST00000416255 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
PDCL3-202ENST00000416255 AKAP12Q02952 1782 aa18.64■□□□□ 0.57
PDCL3-202ENST00000416255 PSME1Q06323 249 aa18.64■□□□□ 0.57
PDCL3-202ENST00000416255 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
PDCL3-202ENST00000416255 ACEP12821 1306 aa18.64■□□□□ 0.57
PDCL3-202ENST00000416255 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.57
PDCL3-202ENST00000416255 ARHGEF10O15013 1369 aa18.63■□□□□ 0.57
PDCL3-202ENST00000416255 PUS7Q96PZ0 661 aaKnown RBP18.62■□□□□ 0.57
PDCL3-202ENST00000416255 MON2Q7Z3U7 1717 aa18.61■□□□□ 0.57
PDCL3-202ENST00000416255 MARF1Q9Y4F3 1742 aaKnown RBP18.61■□□□□ 0.57
PDCL3-202ENST00000416255 USP6P35125 1406 aa18.61■□□□□ 0.57
PDCL3-202ENST00000416255 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
PDCL3-202ENST00000416255 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
PDCL3-202ENST00000416255 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
PDCL3-202ENST00000416255 CABP1Q9NZU7 370 aa18.61■□□□□ 0.57
PDCL3-202ENST00000416255 CD163L1Q9NR16 1453 aa18.6■□□□□ 0.57
PDCL3-202ENST00000416255 SSH2Q76I76 1423 aa18.6■□□□□ 0.57
PDCL3-202ENST00000416255 PHRF1Q9P1Y6 1649 aaKnown RBP18.58■□□□□ 0.56
PDCL3-202ENST00000416255 NUTM2BA6NNL0 878 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms