RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CEP170BQ9Y4F5 1589 aaPredicted RBP26.73■■□□□ 1.87
AP1S3-205ENST00000415298 ZFYVE9O95405 1425 aa26.73■■□□□ 1.87
AP1S3-205ENST00000415298 TRPM1Q7Z4N2 1603 aa26.73■■□□□ 1.87
AP1S3-205ENST00000415298 THEMISQ8N1K5 641 aaPredicted RBP26.73■■□□□ 1.87
AP1S3-205ENST00000415298 ROCK2O75116 1388 aaKnown RBP26.73■■□□□ 1.87
AP1S3-205ENST00000415298 DDX10Q13206 875 aaKnown RBP26.72■■□□□ 1.87
AP1S3-205ENST00000415298 CARD11Q9BXL7 1154 aa26.72■■□□□ 1.87
AP1S3-205ENST00000415298 CHMP4BQ9H444 224 aaKnown RBP26.72■■□□□ 1.87
AP1S3-205ENST00000415298 NRXN1Q9ULB1 1477 aa26.72■■□□□ 1.87
AP1S3-205ENST00000415298 IPO4Q8TEX9 1081 aaKnown RBP26.72■■□□□ 1.87
AP1S3-205ENST00000415298 RALGAPBQ86X10 1494 aa26.71■■□□□ 1.87
AP1S3-205ENST00000415298 PIK3C2GO75747 1445 aa26.7■■□□□ 1.86
AP1S3-205ENST00000415298 TXNDC2Q86VQ3 553 aa26.7■■□□□ 1.86
AP1S3-205ENST00000415298 KDM5AP29375 1690 aaKnown RBP26.69■■□□□ 1.86
AP1S3-205ENST00000415298 NFKBIBQ15653 356 aa26.69■■□□□ 1.86
AP1S3-205ENST00000415298 TMEM132EQ6IEE7 984 aa26.69■■□□□ 1.86
AP1S3-205ENST00000415298 ANP32CO43423 234 aa26.67■■□□□ 1.86
AP1S3-205ENST00000415298 C14orf93Q9H972 538 aaKnown RBP26.67■■□□□ 1.86
AP1S3-205ENST00000415298 HSPA5P11021 654 aaKnown RBP26.66■■□□□ 1.86
AP1S3-205ENST00000415298 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.65■■□□□ 1.86
AP1S3-205ENST00000415298 CANXP27824 592 aaKnown RBP26.65■■□□□ 1.86
AP1S3-205ENST00000415298 HDGFP51858 240 aaKnown RBP26.63■■□□□ 1.85
AP1S3-205ENST00000415298 EIF4G2P78344 907 aaKnown RBP eCLIP26.63■■□□□ 1.85
AP1S3-205ENST00000415298 EID1Q9Y6B2 187 aa26.62■■□□□ 1.85
AP1S3-205ENST00000415298 ZNF142P52746 1687 aaPredicted RBP26.62■■□□□ 1.85
AP1S3-205ENST00000415298 ARHGAP23Q9P227 1491 aa26.62■■□□□ 1.85
AP1S3-205ENST00000415298 SLIT1O75093 1534 aa26.61■■□□□ 1.85
AP1S3-205ENST00000415298 CLCN1P35523 988 aa26.61■■□□□ 1.85
AP1S3-205ENST00000415298 GPRASP1Q5JY77 1395 aa26.6■■□□□ 1.85
AP1S3-205ENST00000415298 HSPA2P54652 639 aa26.6■■□□□ 1.85
AP1S3-205ENST00000415298 HNRNPUQ00839 825 aaKnown RBP eCLIP26.6■■□□□ 1.85
AP1S3-205ENST00000415298 USP47Q96K76 1375 aa26.6■■□□□ 1.85
AP1S3-205ENST00000415298 SLC26A8Q96RN1 970 aa26.58■■□□□ 1.84
AP1S3-205ENST00000415298 BRD2P25440 801 aaKnown RBP26.57■■□□□ 1.84
AP1S3-205ENST00000415298 NPM2Q86SE8 214 aaKnown RBP26.57■■□□□ 1.84
AP1S3-205ENST00000415298 ST20-MTHFSA0A0A6YYL1 179 aa26.57■■□□□ 1.84
AP1S3-205ENST00000415298 ALKQ9UM73 1620 aa26.56■■□□□ 1.84
AP1S3-205ENST00000415298 KIAA1210Q9ULL0 1709 aa26.55■■□□□ 1.84
AP1S3-205ENST00000415298 ANKLE2Q86XL3 938 aa26.55■■□□□ 1.84
AP1S3-205ENST00000415298 NRXN3Q9Y4C0 1643 aa26.55■■□□□ 1.84
AP1S3-205ENST00000415298 TRAK1Q9UPV9 953 aa26.55■■□□□ 1.84
AP1S3-205ENST00000415298 CNGB1Q14028 1251 aaPredicted RBP26.54■■□□□ 1.84
AP1S3-205ENST00000415298 STK26Q9P289 416 aa26.54■■□□□ 1.84
AP1S3-205ENST00000415298 SCAF11Q99590 1463 aaKnown RBP26.53■■□□□ 1.84
AP1S3-205ENST00000415298 ADGRB1O14514 1584 aa26.53■■□□□ 1.84
AP1S3-205ENST00000415298 NCKAP5LQ9HCH0 1330 aa26.53■■□□□ 1.84
AP1S3-205ENST00000415298 IQGAP1P46940 1657 aa26.53■■□□□ 1.84
AP1S3-205ENST00000415298 PLEKHG1Q9ULL1 1385 aa26.52■■□□□ 1.84
AP1S3-205ENST00000415298 ASXL1Q8IXJ9 1541 aa26.52■■□□□ 1.84
AP1S3-205ENST00000415298 METP08581 1390 aa26.51■■□□□ 1.83
AP1S3-205ENST00000415298 ADAMTS13Q76LX8 1427 aa26.5■■□□□ 1.83
AP1S3-205ENST00000415298 LMTK3Q96Q04 1460 aa26.49■■□□□ 1.83
AP1S3-205ENST00000415298 SETBP1Q9Y6X0 1596 aa26.48■■□□□ 1.83
AP1S3-205ENST00000415298 NCLP19338 710 aaKnown RBP26.47■■□□□ 1.83
AP1S3-205ENST00000415298 SETD1AO15047 1707 aaKnown RBP26.47■■□□□ 1.83
AP1S3-205ENST00000415298 LAMC1P11047 1609 aa26.46■■□□□ 1.83
AP1S3-205ENST00000415298 DDRGK1Q96HY6 314 aa26.45■■□□□ 1.82
AP1S3-205ENST00000415298 TPM2P07951 284 aa26.44■■□□□ 1.82
AP1S3-205ENST00000415298 YTHDC2Q9H6S0 1430 aaKnown RBP26.43■■□□□ 1.82
AP1S3-205ENST00000415298 SAFB2Q14151 953 aaKnown RBP eCLIP26.42■■□□□ 1.82
AP1S3-205ENST00000415298 MED14O60244 1454 aa26.42■■□□□ 1.82
AP1S3-205ENST00000415298 DHX37Q8IY37 1157 aaKnown RBP26.41■■□□□ 1.82
AP1S3-205ENST00000415298 TESK2Q96S53 571 aa26.41■■□□□ 1.82
AP1S3-205ENST00000415298 TBX22Q9Y458 520 aa26.4■■□□□ 1.82
AP1S3-205ENST00000415298 L1TD1Q5T7N2 865 aaKnown RBP26.39■■□□□ 1.81
AP1S3-205ENST00000415298 CHMP4AQ9BY43 222 aa26.38■■□□□ 1.81
AP1S3-205ENST00000415298 WAPLQ7Z5K2 1190 aa26.37■■□□□ 1.81
AP1S3-205ENST00000415298 SMAP1Q8IYB5 467 aaPredicted RBP26.37■■□□□ 1.81
AP1S3-205ENST00000415298 NPHP4O75161 1426 aaPredicted RBP26.37■■□□□ 1.81
AP1S3-205ENST00000415298 PTPRUQ92729 1446 aa26.37■■□□□ 1.81
AP1S3-205ENST00000415298 PRAM1Q96QH2 718 aa26.36■■□□□ 1.81
AP1S3-205ENST00000415298 POLR3GLQ9BT43 218 aa26.36■■□□□ 1.81
AP1S3-205ENST00000415298 POLR1AO95602 1720 aaPredicted RBP26.36■■□□□ 1.81
AP1S3-205ENST00000415298 LRPPRCP42704 1394 aaKnown RBP26.34■■□□□ 1.81
AP1S3-205ENST00000415298 AMOTL2Q9Y2J4 779 aa26.34■■□□□ 1.81
AP1S3-205ENST00000415298 EIF3AQ14152 1382 aaKnown RBP26.34■■□□□ 1.81
AP1S3-205ENST00000415298 FTSJ3Q8IY81 847 aaKnown RBP26.33■■□□□ 1.81
AP1S3-205ENST00000415298 ARHGEF28Q8N1W1 1705 aaKnown RBP26.33■■□□□ 1.81
AP1S3-205ENST00000415298 PLEKHH1Q9ULM0 1364 aa26.32■■□□□ 1.8
AP1S3-205ENST00000415298 KIF7Q2M1P5 1343 aa26.32■■□□□ 1.8
AP1S3-205ENST00000415298 ABCC11Q96J66 1382 aa26.31■■□□□ 1.8
AP1S3-205ENST00000415298 DISP3Q9P2K9 1392 aa26.31■■□□□ 1.8
AP1S3-205ENST00000415298 POGKQ9P215 609 aa26.31■■□□□ 1.8
AP1S3-205ENST00000415298 TCERG1O14776 1098 aaKnown RBP26.29■■□□□ 1.8
AP1S3-205ENST00000415298 PDE4AP27815 886 aa26.29■■□□□ 1.8
AP1S3-205ENST00000415298 ZFP91Q96JP5 570 aaPredicted RBP26.29■■□□□ 1.8
AP1S3-205ENST00000415298 STRCQ7RTU9 1775 aa26.29■■□□□ 1.8
AP1S3-205ENST00000415298 ROBO2Q9HCK4 1378 aa26.29■■□□□ 1.8
AP1S3-205ENST00000415298 KCNA6P17658 529 aa26.28■■□□□ 1.8
AP1S3-205ENST00000415298 CCDC7Q96M83 1385 aa26.28■■□□□ 1.8
AP1S3-205ENST00000415298 MINK1Q8N4C8 1332 aaPredicted RBP26.27■■□□□ 1.8
AP1S3-205ENST00000415298 BACH2Q9BYV9 841 aa26.27■■□□□ 1.8
AP1S3-205ENST00000415298 RBM33Q96EV2 1170 aaKnown RBP26.26■■□□□ 1.79
AP1S3-205ENST00000415298 TMF1P82094 1093 aa26.26■■□□□ 1.79
AP1S3-205ENST00000415298 DIP2AQ14689 1571 aa26.26■■□□□ 1.79
AP1S3-205ENST00000415298 FRAT2O75474 233 aaPredicted RBP26.25■■□□□ 1.79
AP1S3-205ENST00000415298 QRICH2Q9H0J4 1663 aa26.24■■□□□ 1.79
AP1S3-205ENST00000415298 TEX2Q8IWB9 1127 aa26.24■■□□□ 1.79
AP1S3-205ENST00000415298 MAP7D2Q96T17 732 aa26.24■■□□□ 1.79
AP1S3-205ENST00000415298 TECPR2O15040 1411 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms