RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 SRCAPQ6ZRS2 3230 aa18.08■□□□□ 0.49
SSR4P1-201ENST00000415143 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.49
SSR4P1-201ENST00000415143 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.48
SSR4P1-201ENST00000415143 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
SSR4P1-201ENST00000415143 NUDCQ9Y266 331 aa18.06■□□□□ 0.48
SSR4P1-201ENST00000415143 ERVK-7P63135 1459 aa18.06■□□□□ 0.48
SSR4P1-201ENST00000415143 KDM5AP29375 1690 aaKnown RBP18.04■□□□□ 0.48
SSR4P1-201ENST00000415143 CC2D1BQ5T0F9 858 aaKnown RBP18.04■□□□□ 0.48
SSR4P1-201ENST00000415143 PUS7Q96PZ0 661 aaKnown RBP18.04■□□□□ 0.48
SSR4P1-201ENST00000415143 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
SSR4P1-201ENST00000415143 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
SSR4P1-201ENST00000415143 PPLO60437 1756 aa18.02■□□□□ 0.48
SSR4P1-201ENST00000415143 ZFYVE9O95405 1425 aa18.02■□□□□ 0.48
SSR4P1-201ENST00000415143 BCANQ96GW7 911 aa18.02■□□□□ 0.48
SSR4P1-201ENST00000415143 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
SSR4P1-201ENST00000415143 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
SSR4P1-201ENST00000415143 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
SSR4P1-201ENST00000415143 PIK3C2BO00750 1634 aa18.01■□□□□ 0.47
SSR4P1-201ENST00000415143 UBR1Q8IWV7 1749 aa17.99■□□□□ 0.47
SSR4P1-201ENST00000415143 TMEM94Q12767 1356 aa17.98■□□□□ 0.47
SSR4P1-201ENST00000415143 JCADQ9P266 1359 aa17.98■□□□□ 0.47
SSR4P1-201ENST00000415143 LTKP29376 864 aa17.96■□□□□ 0.47
SSR4P1-201ENST00000415143 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.47
SSR4P1-201ENST00000415143 AMER1Q5JTC6 1135 aaPredicted RBP17.96■□□□□ 0.47
SSR4P1-201ENST00000415143 IDI1Q13907 227 aa17.95■□□□□ 0.46
SSR4P1-201ENST00000415143 MEX3CQ5U5Q3 659 aaKnown RBP17.95■□□□□ 0.46
SSR4P1-201ENST00000415143 ZNF772Q68DY9 489 aaPredicted RBP17.95■□□□□ 0.46
SSR4P1-201ENST00000415143 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
SSR4P1-201ENST00000415143 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
SSR4P1-201ENST00000415143 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
SSR4P1-201ENST00000415143 LRP6O75581 1613 aa17.94■□□□□ 0.46
SSR4P1-201ENST00000415143 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
SSR4P1-201ENST00000415143 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
SSR4P1-201ENST00000415143 NEXMIFQ5QGS0 1516 aa17.93■□□□□ 0.46
SSR4P1-201ENST00000415143 BLMP54132 1417 aaPredicted RBP17.92■□□□□ 0.46
SSR4P1-201ENST00000415143 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
SSR4P1-201ENST00000415143 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
SSR4P1-201ENST00000415143 RXRBP28702 533 aa17.91■□□□□ 0.46
SSR4P1-201ENST00000415143 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
SSR4P1-201ENST00000415143 ARHGAP23Q9P227 1491 aa17.9■□□□□ 0.46
SSR4P1-201ENST00000415143 SLIT1O75093 1534 aa17.9■□□□□ 0.46
SSR4P1-201ENST00000415143 RNF123Q5XPI4 1314 aa17.9■□□□□ 0.46
SSR4P1-201ENST00000415143 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
SSR4P1-201ENST00000415143 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
SSR4P1-201ENST00000415143 MYOM1P52179 1685 aa17.89■□□□□ 0.45
SSR4P1-201ENST00000415143 NINLQ9Y2I6 1382 aa17.89■□□□□ 0.45
SSR4P1-201ENST00000415143 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
SSR4P1-201ENST00000415143 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
SSR4P1-201ENST00000415143 KCNA6P17658 529 aa17.86■□□□□ 0.45
SSR4P1-201ENST00000415143 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
SSR4P1-201ENST00000415143 SPATA31A6Q5VVP1 1343 aa17.86■□□□□ 0.45
SSR4P1-201ENST00000415143 QRICH2Q9H0J4 1663 aa17.86■□□□□ 0.45
SSR4P1-201ENST00000415143 TMEM131LA2VDJ0 1609 aa17.85■□□□□ 0.45
SSR4P1-201ENST00000415143 MSH6P52701 1360 aa17.85■□□□□ 0.45
SSR4P1-201ENST00000415143 TMEM132EQ6IEE7 984 aa17.85■□□□□ 0.45
SSR4P1-201ENST00000415143 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
SSR4P1-201ENST00000415143 MYO5BQ9ULV0 1848 aa17.85■□□□□ 0.45
SSR4P1-201ENST00000415143 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
SSR4P1-201ENST00000415143 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
SSR4P1-201ENST00000415143 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
SSR4P1-201ENST00000415143 NSD2O96028 1365 aa17.83■□□□□ 0.45
SSR4P1-201ENST00000415143 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
SSR4P1-201ENST00000415143 SHPRHQ149N8 1683 aa17.81■□□□□ 0.44
SSR4P1-201ENST00000415143 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
SSR4P1-201ENST00000415143 RCAN3Q9UKA8 241 aa17.81■□□□□ 0.44
SSR4P1-201ENST00000415143 ADAMTS8Q9UP79 889 aa17.81■□□□□ 0.44
SSR4P1-201ENST00000415143 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
SSR4P1-201ENST00000415143 SLC26A8Q96RN1 970 aa17.8■□□□□ 0.44
SSR4P1-201ENST00000415143 POGKQ9P215 609 aa17.8■□□□□ 0.44
SSR4P1-201ENST00000415143 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
SSR4P1-201ENST00000415143 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 CARD14Q9BXL6 1004 aa17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 NSD3Q9BZ95 1437 aa17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 USP32Q8NFA0 1604 aa17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 POLR3AO14802 1390 aaPredicted RBP17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 ANKRD36BQ8N2N9 1353 aa17.79■□□□□ 0.44
SSR4P1-201ENST00000415143 RGS12O14924 1447 aa17.78■□□□□ 0.44
SSR4P1-201ENST00000415143 ARHGEF28Q8N1W1 1705 aaKnown RBP17.78■□□□□ 0.44
SSR4P1-201ENST00000415143 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
SSR4P1-201ENST00000415143 TERF2IPQ9NYB0 399 aa17.77■□□□□ 0.44
SSR4P1-201ENST00000415143 AFF2P51816 1311 aa17.76■□□□□ 0.43
SSR4P1-201ENST00000415143 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
SSR4P1-201ENST00000415143 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
SSR4P1-201ENST00000415143 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
SSR4P1-201ENST00000415143 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
SSR4P1-201ENST00000415143 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
SSR4P1-201ENST00000415143 SLC12A5Q9H2X9 1139 aa17.76■□□□□ 0.43
SSR4P1-201ENST00000415143 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
SSR4P1-201ENST00000415143 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
SSR4P1-201ENST00000415143 SRPK2P78362 688 aaKnown RBP17.74■□□□□ 0.43
SSR4P1-201ENST00000415143 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
SSR4P1-201ENST00000415143 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
SSR4P1-201ENST00000415143 AHDC1Q5TGY3 1603 aaPredicted RBP17.73■□□□□ 0.43
SSR4P1-201ENST00000415143 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
SSR4P1-201ENST00000415143 STK26Q9P289 416 aa17.73■□□□□ 0.43
SSR4P1-201ENST00000415143 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
SSR4P1-201ENST00000415143 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
SSR4P1-201ENST00000415143 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms