RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 SPHKAPQ2M3C7 1700 aa17.19■□□□□ 0.34
CRIM1-202ENST00000413985 YY1P25490 414 aa17.18■□□□□ 0.34
CRIM1-202ENST00000413985 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
CRIM1-202ENST00000413985 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
CRIM1-202ENST00000413985 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
CRIM1-202ENST00000413985 PXDNQ92626 1479 aa17.17■□□□□ 0.34
CRIM1-202ENST00000413985 SLIT2O94813 1529 aa17.16■□□□□ 0.34
CRIM1-202ENST00000413985 IQGAP3Q86VI3 1631 aa17.16■□□□□ 0.34
CRIM1-202ENST00000413985 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
CRIM1-202ENST00000413985 R3HDM1Q15032 1099 aaKnown RBP17.13■□□□□ 0.33
CRIM1-202ENST00000413985 BAG6P46379 1132 aa17.11■□□□□ 0.33
CRIM1-202ENST00000413985 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
CRIM1-202ENST00000413985 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
CRIM1-202ENST00000413985 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
CRIM1-202ENST00000413985 FOXO3O43524 673 aa17.1■□□□□ 0.33
CRIM1-202ENST00000413985 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
CRIM1-202ENST00000413985 NPHP3Q7Z494 1330 aa17.1■□□□□ 0.33
CRIM1-202ENST00000413985 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
CRIM1-202ENST00000413985 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
CRIM1-202ENST00000413985 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
CRIM1-202ENST00000413985 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
CRIM1-202ENST00000413985 VPS72Q15906 364 aa17.05■□□□□ 0.32
CRIM1-202ENST00000413985 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
CRIM1-202ENST00000413985 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
CRIM1-202ENST00000413985 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
CRIM1-202ENST00000413985 NUTM2FA1L443 756 aa17.03■□□□□ 0.32
CRIM1-202ENST00000413985 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
CRIM1-202ENST00000413985 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
CRIM1-202ENST00000413985 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.32
CRIM1-202ENST00000413985 A0A0G2JS52 829 aa17.02■□□□□ 0.32
CRIM1-202ENST00000413985 MYT1Q01538 1121 aa17.02■□□□□ 0.32
CRIM1-202ENST00000413985 NUP155O75694 1391 aa17.02■□□□□ 0.31
CRIM1-202ENST00000413985 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
CRIM1-202ENST00000413985 CLTCL1P53675 1640 aa17.01■□□□□ 0.31
CRIM1-202ENST00000413985 EZH2Q15910 746 aaKnown RBP17.01■□□□□ 0.31
CRIM1-202ENST00000413985 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
CRIM1-202ENST00000413985 SPATA31A3Q5VYP0 1347 aa17■□□□□ 0.31
CRIM1-202ENST00000413985 PRAG1Q86YV5 1406 aa17■□□□□ 0.31
CRIM1-202ENST00000413985 NWD2Q9ULI1 1742 aa17■□□□□ 0.31
CRIM1-202ENST00000413985 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
CRIM1-202ENST00000413985 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
CRIM1-202ENST00000413985 ABCA3Q99758 1704 aa16.97■□□□□ 0.31
CRIM1-202ENST00000413985 DISP2A7MBM2 1401 aa16.96■□□□□ 0.31
CRIM1-202ENST00000413985 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
CRIM1-202ENST00000413985 IFFO2Q5TF58 517 aa16.96■□□□□ 0.31
CRIM1-202ENST00000413985 LRPPRCP42704 1394 aaKnown RBP16.96■□□□□ 0.31
CRIM1-202ENST00000413985 NRAPQ86VF7 1730 aa16.96■□□□□ 0.3
CRIM1-202ENST00000413985 NAIPQ13075 1403 aa16.96■□□□□ 0.3
CRIM1-202ENST00000413985 CAMTA1Q9Y6Y1 1673 aa16.95■□□□□ 0.3
CRIM1-202ENST00000413985 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
CRIM1-202ENST00000413985 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
CRIM1-202ENST00000413985 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
CRIM1-202ENST00000413985 APLP2Q06481 763 aa16.92■□□□□ 0.3
CRIM1-202ENST00000413985 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
CRIM1-202ENST00000413985 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
CRIM1-202ENST00000413985 TNS3Q68CZ2 1445 aa16.91■□□□□ 0.3
CRIM1-202ENST00000413985 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
CRIM1-202ENST00000413985 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
CRIM1-202ENST00000413985 KIF1BO60333 1816 aa16.91■□□□□ 0.3
CRIM1-202ENST00000413985 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
CRIM1-202ENST00000413985 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
CRIM1-202ENST00000413985 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.3
CRIM1-202ENST00000413985 TRIM37O94972 964 aa16.89■□□□□ 0.29
CRIM1-202ENST00000413985 NUP188Q5SRE5 1749 aa16.89■□□□□ 0.29
CRIM1-202ENST00000413985 RREB1Q92766 1687 aa16.88■□□□□ 0.29
CRIM1-202ENST00000413985 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
CRIM1-202ENST00000413985 ZNF784Q8NCA9 323 aaPredicted RBP16.88■□□□□ 0.29
CRIM1-202ENST00000413985 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
CRIM1-202ENST00000413985 ROCK1Q13464 1354 aa16.88■□□□□ 0.29
CRIM1-202ENST00000413985 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
CRIM1-202ENST00000413985 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
CRIM1-202ENST00000413985 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
CRIM1-202ENST00000413985 BTG4Q9NY30 223 aa16.87■□□□□ 0.29
CRIM1-202ENST00000413985 PPP1R1BQ9UD71 204 aaPredicted RBP16.86■□□□□ 0.29
CRIM1-202ENST00000413985 STK26Q9P289 416 aa16.85■□□□□ 0.29
CRIM1-202ENST00000413985 APBA3O96018 575 aa16.84■□□□□ 0.29
CRIM1-202ENST00000413985 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
CRIM1-202ENST00000413985 PPLO60437 1756 aa16.84■□□□□ 0.29
CRIM1-202ENST00000413985 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
CRIM1-202ENST00000413985 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
CRIM1-202ENST00000413985 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
CRIM1-202ENST00000413985 SPON1Q9HCB6 807 aa16.82■□□□□ 0.28
CRIM1-202ENST00000413985 KCNQ2O43526 872 aa16.81■□□□□ 0.28
CRIM1-202ENST00000413985 PHF8Q9UPP1 1060 aa16.81■□□□□ 0.28
CRIM1-202ENST00000413985 TECPR2O15040 1411 aa16.8■□□□□ 0.28
CRIM1-202ENST00000413985 SBNO1A3KN83 1393 aa16.8■□□□□ 0.28
CRIM1-202ENST00000413985 COL14A1Q05707 1796 aaKnown RBP16.8■□□□□ 0.28
CRIM1-202ENST00000413985 IFT172Q9UG01 1749 aa16.8■□□□□ 0.28
CRIM1-202ENST00000413985 ITGAEP38570 1179 aa16.8■□□□□ 0.28
CRIM1-202ENST00000413985 PSME1Q06323 249 aa16.8■□□□□ 0.28
CRIM1-202ENST00000413985 ARHGEF10O15013 1369 aa16.79■□□□□ 0.28
CRIM1-202ENST00000413985 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
CRIM1-202ENST00000413985 UTRNP46939 3433 aa16.79■□□□□ 0.28
CRIM1-202ENST00000413985 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
CRIM1-202ENST00000413985 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
CRIM1-202ENST00000413985 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
CRIM1-202ENST00000413985 KNDC1Q76NI1 1749 aa16.78■□□□□ 0.28
CRIM1-202ENST00000413985 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.28
CRIM1-202ENST00000413985 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
CRIM1-202ENST00000413985 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms